BLASTX nr result

ID: Panax21_contig00008154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008154
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24753.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...   265   4e-69
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   221   5e-56
ref|XP_002875963.1| hypothetical protein ARALYDRAFT_485301 [Arab...   214   4e-54
gb|AAG52180.1|AC012329_7 hypothetical protein; 45807-49650 [Arab...   214   8e-54

>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  265 bits (676), Expect = 4e-69
 Identities = 123/159 (77%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 VPKKVSWENYIPKCSEQWEWQMAVCNLFDERPIWKKDSLAEQLVDKGLIIGDYMLRRLLF 292
           +PKKV+WE YIPK SEQWEWQMAV NLFDERPIW K +L E+L+DKGL +GDY LRRLLF
Sbjct: 264 IPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGLNVGDYTLRRLLF 323

Query: 291 RAAYYFSNGPFLKFWIRKRYDTRKDPESRIYQRTDFRVPPSLRSYCDANV--GLKHRWKN 118
           R AYYFSNGPFL+FWIRK YD RK+P+S IYQR DFRVPPSLRSYCDAN   GLK RW++
Sbjct: 324 RTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSLRSYCDANAANGLKQRWED 383

Query: 117 ICSFRVFPYKCQNSLQLFELADDYIQQEIKKASNQQTCS 1
           ICSFRVFPYKC  SLQLFELADDYIQQEI+K   Q TC+
Sbjct: 384 ICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCT 422


>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score =  265 bits (676), Expect = 4e-69
 Identities = 123/159 (77%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 VPKKVSWENYIPKCSEQWEWQMAVCNLFDERPIWKKDSLAEQLVDKGLIIGDYMLRRLLF 292
           +PKKV+WE YIPK SEQWEWQMAV NLFDERPIW K +L E+L+DKGL +GDY LRRLLF
Sbjct: 227 IPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGLNVGDYTLRRLLF 286

Query: 291 RAAYYFSNGPFLKFWIRKRYDTRKDPESRIYQRTDFRVPPSLRSYCDANV--GLKHRWKN 118
           R AYYFSNGPFL+FWIRK YD RK+P+S IYQR DFRVPPSLRSYCDAN   GLK RW++
Sbjct: 287 RTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSLRSYCDANAANGLKQRWED 346

Query: 117 ICSFRVFPYKCQNSLQLFELADDYIQQEIKKASNQQTCS 1
           ICSFRVFPYKC  SLQLFELADDYIQQEI+K   Q TC+
Sbjct: 347 ICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCT 385


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/159 (65%), Positives = 122/159 (76%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 VPKKVSWENYIPKCSEQWEWQMAVCNLFDERPIWKKDSLAEQLVDKGLIIGDYMLRRLLF 292
           +PKKV+WE YIP+ S+QWE QM V  +FDERPIW K+SL E L+DKGL     MLRRLL 
Sbjct: 226 IPKKVNWEEYIPQGSDQWELQMVVSRMFDERPIWSKNSLTELLLDKGLSFSHSMLRRLLS 285

Query: 291 RAAYYFSNGPFLKFWIRKRYDTRKDPESRIYQRTDFRVPPSLRSYCDANVG--LKHRWKN 118
           R +YYFS+GPFL+FWI+K YD RKDP SRIYQR D+RVP  LRSYCDA+     KHRWK+
Sbjct: 286 RISYYFSSGPFLRFWIKKGYDPRKDPNSRIYQRIDYRVPVPLRSYCDAHSANKSKHRWKD 345

Query: 117 ICSFRVFPYKCQNSLQLFELADDYIQQEIKKASNQQTCS 1
           IC+FRVFPYK Q SLQ F+L DDYIQ EI K   + TC+
Sbjct: 346 ICAFRVFPYKFQTSLQFFDLVDDYIQSEINKPPFRPTCT 384


>ref|XP_002875963.1| hypothetical protein ARALYDRAFT_485301 [Arabidopsis lyrata subsp.
           lyrata] gi|297321801|gb|EFH52222.1| hypothetical protein
           ARALYDRAFT_485301 [Arabidopsis lyrata subsp. lyrata]
          Length = 571

 Score =  214 bits (546), Expect = 4e-54
 Identities = 93/159 (58%), Positives = 123/159 (77%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 VPKKVSWENYIPKCSEQWEWQMAVCNLFDERPIWKKDSLAEQLVDKGLIIGDYMLRRLLF 292
           +PKK+ WE+++ + S  W+WQ++V  LF+ERPIW +DS+ ++L+DKGL    +ML R L 
Sbjct: 222 IPKKLKWEDFVSRSSNHWQWQVSVSALFEERPIWTRDSVVQRLLDKGLKCTHHMLNRFLL 281

Query: 291 RAAYYFSNGPFLKFWIRKRYDTRKDPESRIYQRTDFRVPPSLRSYCDANV--GLKHRWKN 118
           RAAYYFS+GPFL+FWI++ YD R DPESR+YQR +FRVPP LRSYCDAN     K  W +
Sbjct: 282 RAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQRMEFRVPPELRSYCDANATNSAKPSWND 341

Query: 117 ICSFRVFPYKCQNSLQLFELADDYIQQEIKKASNQQTCS 1
           IC+F++FP+KCQ  LQLFEL D+YIQ+EI+K   Q TCS
Sbjct: 342 ICAFKLFPFKCQTFLQLFELDDEYIQREIRKPPKQTTCS 380


>gb|AAG52180.1|AC012329_7 hypothetical protein; 45807-49650 [Arabidopsis thaliana]
          Length = 595

 Score =  214 bits (544), Expect = 8e-54
 Identities = 93/159 (58%), Positives = 122/159 (76%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 VPKKVSWENYIPKCSEQWEWQMAVCNLFDERPIWKKDSLAEQLVDKGLIIGDYMLRRLLF 292
           +PKK+ WE+++ + S  W+WQ+AV  LF+ERPIW +DS+ ++L+DKGL    +ML R L 
Sbjct: 214 IPKKLKWEDFVSRSSNHWQWQVAVSALFEERPIWTRDSVVQRLLDKGLKCTHHMLNRFLL 273

Query: 291 RAAYYFSNGPFLKFWIRKRYDTRKDPESRIYQRTDFRVPPSLRSYCDANV--GLKHRWKN 118
           RAAYYFS+GPFL+FWI++ YD R DPESR+YQR +FRVPP LR YCDAN     K  W +
Sbjct: 274 RAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQRMEFRVPPELRGYCDANATNNSKPSWND 333

Query: 117 ICSFRVFPYKCQNSLQLFELADDYIQQEIKKASNQQTCS 1
           IC+F++FP+KCQ  LQLFEL D+YIQ+EI+K   Q TCS
Sbjct: 334 ICAFKLFPFKCQTFLQLFELDDEYIQREIRKPPKQTTCS 372


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