BLASTX nr result

ID: Panax21_contig00008152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008152
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25234.3| unnamed protein product [Vitis vinifera]              235   7e-60
ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein lig...   235   7e-60
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]   235   9e-60
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   232   6e-59
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   229   5e-58

>emb|CBI25234.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  235 bits (600), Expect = 7e-60
 Identities = 100/204 (49%), Positives = 139/204 (68%), Gaps = 3/204 (1%)
 Frame = -1

Query: 784 CEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSGACR 605
           CEIC E +E   MF N  C HS C DC  KH+  KI+ ++ ++ CPG++C  +LD   CR
Sbjct: 109 CEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIESNSGMILCPGMDCRGVLDPERCR 168

Query: 604 WMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDSPQVI---KETKCPVCQRTF 434
             +PK ++ RW+++I ++LIL+SEK YCPFKDCSAML+ND+ + +   +E++CP C+R F
Sbjct: 169 GFLPKTVVERWEKAIIETLILDSEKFYCPFKDCSAMLLNDNAEAVMMMRESECPHCRRLF 228

Query: 433 CAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLHI 254
           C  C VPWHS   C E  +LN  ++G  D+L++KLA           KFYVEK +GC+H+
Sbjct: 229 CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 288

Query: 253 TCRCAYEFCYRCGSKWSSKHGSCR 182
           TCRC +EFCYRCG KWS  HG+C+
Sbjct: 289 TCRCGFEFCYRCGGKWSVNHGTCQ 312


>ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Vitis
           vinifera]
          Length = 378

 Score =  235 bits (600), Expect = 7e-60
 Identities = 100/204 (49%), Positives = 139/204 (68%), Gaps = 3/204 (1%)
 Frame = -1

Query: 784 CEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSGACR 605
           CEIC E +E   MF N  C HS C DC  KH+  KI+ ++ ++ CPG++C  +LD   CR
Sbjct: 172 CEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIESNSGMILCPGMDCRGVLDPERCR 231

Query: 604 WMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDSPQVI---KETKCPVCQRTF 434
             +PK ++ RW+++I ++LIL+SEK YCPFKDCSAML+ND+ + +   +E++CP C+R F
Sbjct: 232 GFLPKTVVERWEKAIIETLILDSEKFYCPFKDCSAMLLNDNAEAVMMMRESECPHCRRLF 291

Query: 433 CAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLHI 254
           C  C VPWHS   C E  +LN  ++G  D+L++KLA           KFYVEK +GC+H+
Sbjct: 292 CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 351

Query: 253 TCRCAYEFCYRCGSKWSSKHGSCR 182
           TCRC +EFCYRCG KWS  HG+C+
Sbjct: 352 TCRCGFEFCYRCGGKWSVNHGTCQ 375



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -1

Query: 784 CEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKI---QDSASIVTCPGVNCSVMLDSG 614
           C +CM++ E  + + NS+CSHS+C  C   ++  +I   + ++S+  CP   C  +L+  
Sbjct: 35  CLLCMKSMESEETYRNSSCSHSYCIKCISMYVPLRIVLNKGTSSMFRCPAYKCKAILELS 94

Query: 613 ACRWMIPKDILIRWDESICKSLILESEKVYCPFKDCS 503
               ++P  +  RW+ +  ++L +ES+K   PF+DC+
Sbjct: 95  P--GIVPGPVFQRWNAAKYEALHIESKKNQSPFEDCN 129


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score =  235 bits (599), Expect = 9e-60
 Identities = 100/206 (48%), Positives = 139/206 (67%), Gaps = 3/206 (1%)
 Frame = -1

Query: 784  CEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSGACR 605
            CEIC E +E   MF N  C HS C DC  KH+  KI+ ++ ++ CPG++C  +LD   CR
Sbjct: 587  CEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIESNSGMILCPGMDCRGVLDPERCR 646

Query: 604  WMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDSPQVI---KETKCPVCQRTF 434
              +PK ++ RW+ +I ++LIL+SEK YCPFKDCSAML+ND+ + +   +E++CP C+R F
Sbjct: 647  GFLPKTVVERWEXAIIETLILDSEKFYCPFKDCSAMLLNDNAEAVMMMRESECPHCRRLF 706

Query: 433  CAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLHI 254
            C  C VPWHS   C E  +LN  ++G  D+L++KLA           KFYVEK +GC+H+
Sbjct: 707  CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 766

Query: 253  TCRCAYEFCYRCGSKWSSKHGSCRAK 176
            TCRC +EFCYRCG KWS  HG+C+ +
Sbjct: 767  TCRCGFEFCYRCGGKWSVNHGTCQLR 792



 Score =  199 bits (506), Expect = 6e-49
 Identities = 87/184 (47%), Positives = 127/184 (69%), Gaps = 1/184 (0%)
 Frame = -1

Query: 793 QSFCEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSG 614
           ++FCEIC E RE+ +MF +  C H+FC  C  KH+  KIQ+S  +VTCP + C  +L+  
Sbjct: 59  ENFCEICAEMREVDEMFRSGKCCHTFCSYCISKHVAVKIQESVRMVTCPALXCEGVLEVD 118

Query: 613 ACRWMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDS-PQVIKETKCPVCQRT 437
            CR ++ ++++ +W+E  C+S+I  S++ YCPF+DCSAMLV+D+  +VI+E++CPVC+R 
Sbjct: 119 DCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLVDDNGGEVIRESECPVCRRL 178

Query: 436 FCAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLH 257
           FCA C+VPWHS   C E+  +N  +KG  DL++ +LA           KFYVEK +GCLH
Sbjct: 179 FCAXCYVPWHSGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLH 238

Query: 256 ITCR 245
           ITCR
Sbjct: 239 ITCR 242



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -1

Query: 784 CEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKI---QDSASIVTCPGVNCSVMLDSG 614
           C +CM++ E  + + NS+CSHS+C  C   ++  +I   + ++S+  CP   C  +L+  
Sbjct: 450 CLLCMKSMESEETYRNSSCSHSYCIKCISMYVPLRIVLNKGTSSMFRCPAYKCKAILELS 509

Query: 613 ACRWMIPKDILIRWDESICKSLILESEKVYCPFKDCS 503
               ++P  +  RW+ +  ++L +ES+K   PF+DC+
Sbjct: 510 P--GIVPGPVFQRWNAAKYEALHIESKKNQSPFEDCN 544


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  232 bits (592), Expect = 6e-59
 Identities = 97/207 (46%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
 Frame = -1

Query: 793 QSFCEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSG 614
           ++FCEIC E R + +MF +  C H+FC  C  KH+  KIQ+S  +VTCP ++C  +L+  
Sbjct: 95  ENFCEICAERRGLDEMFRSGKCCHTFCSYCISKHVAVKIQESVRMVTCPALSCEGVLEVD 154

Query: 613 ACRWMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDSP-QVIKETKCPVCQRT 437
            CR ++ ++++ +W+E  C+S+I  S++ YCPF+DCSAMLV+D+  +VI+E++CPVC+R 
Sbjct: 155 DCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLVDDNGGEVIRESECPVCRRL 214

Query: 436 FCAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLH 257
           FCA C+VPWHS   C E+  +N  +KG  DL++ +LA           KFYVEK +GCLH
Sbjct: 215 FCAACYVPWHSGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLH 274

Query: 256 ITCRCAYEFCYRCGSKWSSKHGSCRAK 176
           ITCRC Y+FCY CG++W+  HG C+ +
Sbjct: 275 ITCRCTYQFCYACGAQWTQHHGGCQTQ 301


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  229 bits (584), Expect = 5e-58
 Identities = 97/204 (47%), Positives = 135/204 (66%), Gaps = 1/204 (0%)
 Frame = -1

Query: 793 QSFCEICMENREIWQMFVNSTCSHSFCYDCTCKHIIAKIQDSASIVTCPGVNCSVMLDSG 614
           Q FCEIC+E +E  QMF   +C HSFC DC  K++  KIQ+S +IVTCPG+NC  +L+  
Sbjct: 102 QIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQESQTIVTCPGMNCRAVLELD 161

Query: 613 ACRWMIPKDILIRWDESICKSLILESEKVYCPFKDCSAMLVNDSP-QVIKETKCPVCQRT 437
            CR  + K ++  W+E++CK +I   +  YCPF+DCSA+LVND+  +VI+E++CP C R 
Sbjct: 162 ICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLVNDNEGEVIRESECPFCHRL 221

Query: 436 FCAWCHVPWHSEFTCNEFLKLNGKKKGGVDLLVEKLAXXXXXXXXXXXKFYVEKNQGCLH 257
           FCA C+VPWHS   C  F +LN  ++G  DL+V +LA           +FYVE+ QGC H
Sbjct: 222 FCAQCYVPWHSGIECEAFQRLNEDERGREDLMVIELAKEKKWSRCPKCRFYVERTQGCPH 281

Query: 256 ITCRCAYEFCYRCGSKWSSKHGSC 185
           + CRC ++FCY C  +W+  HG C
Sbjct: 282 MVCRCGFQFCYGCELEWTGNHGGC 305


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