BLASTX nr result

ID: Panax21_contig00008146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008146
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [...    64   2e-08
ref|XP_002520685.1| phosphoric diester hydrolase, putative [Rici...    64   2e-08
ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arab...    57   2e-06
ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thalian...    57   2e-06
ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thal...    57   2e-06

>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
          Length = 405

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +2

Query: 323 MSLKSIIQDMKGEFGSISRKGFDVKFGYGLRSRS 424
           MS KSIIQDM+GEFGSISRKGF+VKF YGLRSRS
Sbjct: 1   MSFKSIIQDMRGEFGSISRKGFEVKFNYGLRSRS 34


>ref|XP_002520685.1| phosphoric diester hydrolase, putative [Ricinus communis]
           gi|223540070|gb|EEF41647.1| phosphoric diester
           hydrolase, putative [Ricinus communis]
          Length = 444

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = +2

Query: 323 MSLKSIIQDMKGEFGSISRKGFDVKFGYGLRSRS 424
           MS +SI+QDM+GEFGS+SRKGFDVKFGYG+RSRS
Sbjct: 1   MSFRSILQDMRGEFGSMSRKGFDVKFGYGMRSRS 34


>ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arabidopsis lyrata subsp.
           lyrata] gi|297327975|gb|EFH58395.1| hypothetical protein
           ARALYDRAFT_322431 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 323 MSLKSIIQDMKGEFGSISRKGFDVKFGYGLRSRS 424
           MS KS+IQDM+GE GSISRKGFDV+FGYG RSRS
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYG-RSRS 33


>ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
           gi|79324947|ref|NP_001031558.1| Tubby-like F-box protein
           3 [Arabidopsis thaliana]
           gi|75248467|sp|Q8VY21.1|TLP3_ARATH RecName:
           Full=Tubby-like F-box protein 3; Short=AtTLP3
           gi|18377640|gb|AAL66970.1| putative tubby protein
           [Arabidopsis thaliana] gi|20465543|gb|AAM20254.1|
           putative tubby protein [Arabidopsis thaliana]
           gi|27372514|gb|AAK98802.1| tubby-like protein 3
           [Arabidopsis thaliana] gi|330255813|gb|AEC10907.1|
           Tubby-like F-box protein 3 [Arabidopsis thaliana]
           gi|330255814|gb|AEC10908.1| Tubby-like F-box protein 3
           [Arabidopsis thaliana]
          Length = 406

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 323 MSLKSIIQDMKGEFGSISRKGFDVKFGYGLRSRS 424
           MS KS+IQDM+GE GSISRKGFDV+FGYG RSRS
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYG-RSRS 33


>ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
           gi|3738302|gb|AAC63644.1| putative tubby protein
           [Arabidopsis thaliana] gi|20197552|gb|AAM15124.1|
           putative tubby protein [Arabidopsis thaliana]
           gi|227204449|dbj|BAH57076.1| AT2G47900 [Arabidopsis
           thaliana] gi|330255815|gb|AEC10909.1| Tubby-like F-box
           protein 3 [Arabidopsis thaliana]
          Length = 407

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 323 MSLKSIIQDMKGEFGSISRKGFDVKFGYGLRSRS 424
           MS KS+IQDM+GE GSISRKGFDV+FGYG RSRS
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYG-RSRS 33


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