BLASTX nr result
ID: Panax21_contig00008139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008139
(781 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90... 183 7e-75
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2... 181 2e-73
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [... 169 2e-72
gb|AFK33945.1| unknown [Lotus japonicus] 175 3e-72
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1... 180 4e-72
>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
ribosomal protein L1 [Solanum tuberosum]
Length = 229
Score = 183 bits (464), Expect(2) = 7e-75
Identities = 89/106 (83%), Positives = 100/106 (94%)
Frame = -1
Query: 619 MPKSKRNKAVTLSKTKKKGREHKETILNSIRDSVEKYNSIFVFSFENMRNLKFKEFREQL 440
MPKSKRN+AVTLSKTKKKG+EHKE I+NSIR+ EKY+S +VFSFENMRNLKFKEFR+QL
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60
Query: 439 RSSSRFFLGSNKVMQVSLGRSVSDEIRPGLHKVSKLLRGDSGLCCT 302
+SSSRFFLGSNKVMQV+LGRS SDEIRPGLHK+SKL+RGDSGLC T
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFT 106
Score = 124 bits (311), Expect(2) = 7e-75
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = -2
Query: 195 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 16
EKVEL+EGPLDQFTHEMEPFLRKQGMPVRLN+GVVELVSDFVVCEEG+PLSPE+ARILRL
Sbjct: 134 EKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEGRPLSPEAARILRL 193
Query: 15 LGIKM 1
LG KM
Sbjct: 194 LGKKM 198
>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
predicted protein [Populus trichocarpa]
Length = 229
Score = 181 bits (459), Expect(2) = 2e-73
Identities = 91/106 (85%), Positives = 99/106 (93%)
Frame = -1
Query: 619 MPKSKRNKAVTLSKTKKKGREHKETILNSIRDSVEKYNSIFVFSFENMRNLKFKEFREQL 440
MPKSKRN+ VTLSKTKKKGREHKE+I+NSIRD+VEKYNSI+VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 439 RSSSRFFLGSNKVMQVSLGRSVSDEIRPGLHKVSKLLRGDSGLCCT 302
+ +SRFFLGSNKVMQVSLGRS +DEIRPGLHKVSKLL GDSGL T
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLT 106
Score = 121 bits (304), Expect(2) = 2e-73
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = -2
Query: 195 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 16
E VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV++LVS+FVVCEEGKPLSPES+RILRL
Sbjct: 134 EMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEGKPLSPESSRILRL 193
Query: 15 LGIKM 1
LG KM
Sbjct: 194 LGTKM 198
>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
gi|298204604|emb|CBI23879.3| unnamed protein product
[Vitis vinifera]
Length = 229
Score = 169 bits (429), Expect(2) = 2e-72
Identities = 83/106 (78%), Positives = 98/106 (92%)
Frame = -1
Query: 619 MPKSKRNKAVTLSKTKKKGREHKETILNSIRDSVEKYNSIFVFSFENMRNLKFKEFREQL 440
MPKSKR++ VTLSKTKKKGR HKE+I+NSIR +VE Y+SI+VFSFENMRNLKFKEFRE+L
Sbjct: 1 MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60
Query: 439 RSSSRFFLGSNKVMQVSLGRSVSDEIRPGLHKVSKLLRGDSGLCCT 302
+S+SRFFLGSNKVMQ+++GRSV+DEIRPGL KVSKLL GD+GL T
Sbjct: 61 KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFT 106
Score = 129 bits (325), Expect(2) = 2e-72
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = -2
Query: 195 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 16
EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG PLSPESARILRL
Sbjct: 134 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGTPLSPESARILRL 193
Query: 15 LGIKM 1
LGIKM
Sbjct: 194 LGIKM 198
>gb|AFK33945.1| unknown [Lotus japonicus]
Length = 229
Score = 175 bits (444), Expect(2) = 3e-72
Identities = 86/106 (81%), Positives = 99/106 (93%)
Frame = -1
Query: 619 MPKSKRNKAVTLSKTKKKGREHKETILNSIRDSVEKYNSIFVFSFENMRNLKFKEFREQL 440
MPKSKRNK VTLSKTKKKGREHKE I+N+IRD+ EKY+S++VFSFENMRNLKFKEFR++L
Sbjct: 1 MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60
Query: 439 RSSSRFFLGSNKVMQVSLGRSVSDEIRPGLHKVSKLLRGDSGLCCT 302
+SSSRFFLGSNKVMQV+LGRS SDEI+P L+KVSKLLRGDSG+ T
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFT 106
Score = 123 bits (308), Expect(2) = 3e-72
Identities = 59/65 (90%), Positives = 64/65 (98%)
Frame = -2
Query: 195 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 16
EKV+L+EGPL+QFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEGKPLSPE++RILRL
Sbjct: 134 EKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEGKPLSPEASRILRL 193
Query: 15 LGIKM 1
LGIKM
Sbjct: 194 LGIKM 198
>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
unknown [Populus trichocarpa]
gi|222846270|gb|EEE83817.1| predicted protein [Populus
trichocarpa]
Length = 229
Score = 180 bits (456), Expect(2) = 4e-72
Identities = 90/106 (84%), Positives = 99/106 (93%)
Frame = -1
Query: 619 MPKSKRNKAVTLSKTKKKGREHKETILNSIRDSVEKYNSIFVFSFENMRNLKFKEFREQL 440
MPKSKRN+ VTLSKTKKKGREHKE+I+NSIRD+VEKYNSI+VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 439 RSSSRFFLGSNKVMQVSLGRSVSDEIRPGLHKVSKLLRGDSGLCCT 302
+ +SRFFLGSNKVMQVSLGRS +DEIRPGLHKVSKLL GD+GL T
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLT 106
Score = 118 bits (295), Expect(2) = 4e-72
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = -2
Query: 195 EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 16
E VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV+ELVSDFVV EEGKPLSPE ARILRL
Sbjct: 134 ETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEGKPLSPECARILRL 193
Query: 15 LGIK 4
LG K
Sbjct: 194 LGTK 197