BLASTX nr result

ID: Panax21_contig00008131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008131
         (2271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-39
ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [S...   148   7e-33
tpg|DAA38003.1| TPA: hypothetical protein ZEAMMB73_810727, parti...   144   1e-31
ref|NP_001168462.1| hypothetical protein [Zea mays] gi|223948435...   144   1e-31
gb|EEE60932.1| hypothetical protein OsJ_14671 [Oryza sativa Japo...   140   1e-30

>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
            predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  169 bits (428), Expect = 3e-39
 Identities = 103/215 (47%), Positives = 112/215 (52%), Gaps = 50/215 (23%)
 Frame = -3

Query: 1663 FLSYYEILVDLLVTIACHYVGRCWSSSPDERTSVPYSDFPYLVVXXXXXXXXXXXXXXXX 1484
            FLS+ EI   L VTIACH   RCWSSSPD RTSVPYSDFP LVV                
Sbjct: 471  FLSHCEIPCHLPVTIACHNTERCWSSSPDNRTSVPYSDFPNLVVV--------------- 515

Query: 1483 XXXXXXXXXXYPPFPEAITFGQDRKKLGITCHHPKLILLQREDSIRVIITSVNLVPQ--- 1313
                      +PPFPE+I FGQDRK+ GI CHHPKL++LQREDSIRVIITS NLV     
Sbjct: 516  ----------FPPFPESIAFGQDRKRRGIACHHPKLLVLQREDSIRVIITSANLVSNQVV 565

Query: 1312 -----------------------------------------------QLAKFMASLVADV 1274
                                                           QLA FMA LV +V
Sbjct: 566  AHSKWNNVTNTVWWQDFPARSAPDPSPLFIRVSDGDANKDSRSDFAAQLAGFMACLVINV 625

Query: 1273 PSQADWIMELTNYDFKGAVGHLVASITEIHSPRIP 1169
            PSQA WI ELT YDF+GA GHLVAS+  IHS R P
Sbjct: 626  PSQAYWISELTKYDFEGANGHLVASVPGIHSRRSP 660


>ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [Sorghum bicolor]
            gi|241937571|gb|EES10716.1| hypothetical protein
            SORBIDRAFT_06g015125 [Sorghum bicolor]
          Length = 972

 Score =  148 bits (373), Expect = 7e-33
 Identities = 89/218 (40%), Positives = 114/218 (52%), Gaps = 38/218 (17%)
 Frame = -3

Query: 1663 FLSYYEILVDLLVTIACHYVGRCWSSSPDERTSVPYSDFPYLVVXXXXXXXXXXXXXXXX 1484
            FL+Y +I   L VTIACH   RCWS+S + RT+ P+   P L++                
Sbjct: 307  FLNYCKIPQHLPVTIACHNKDRCWSASSENRTAAPFESHPKLLLV--------------- 351

Query: 1483 XXXXXXXXXXYPPFPEAITFGQDRKKLGITCHHPKLILLQREDSIRVIITSVNLVPQ--- 1313
                      +P FPE I FGQDRKK G+ CHHPKLI+LQREDS+RVI+TS NLVP+   
Sbjct: 352  ----------FPRFPEEIAFGQDRKKQGVACHHPKLIVLQREDSMRVIVTSANLVPRQWH 401

Query: 1312 -----------------------------------QLAKFMASLVADVPSQADWIMELTN 1238
                                               QL  F+AS+V +VPSQA  I E+  
Sbjct: 402  LITNTVWWQDFPRRTSLDYAALFSAAEKQKSDFAAQLVSFIASMVNEVPSQAYLINEIAK 461

Query: 1237 YDFKGAVGHLVASITEIHSPRIPYISESRYFLMASNIV 1124
            YDF+GA G+L+AS+  IH+   PY+ ES YFL A + V
Sbjct: 462  YDFEGAGGYLIASVPGIHAQSPPYL-ESNYFLSAKHNV 498


>tpg|DAA38003.1| TPA: hypothetical protein ZEAMMB73_810727, partial [Zea mays]
          Length = 816

 Score =  144 bits (363), Expect = 1e-31
 Identities = 88/218 (40%), Positives = 115/218 (52%), Gaps = 38/218 (17%)
 Frame = -3

Query: 1663 FLSYYEILVDLLVTIACHYVGRCWSSSPDERTSVPYSDFPYLVVXXXXXXXXXXXXXXXX 1484
            FL+Y +I   L VTIACH   RCWS+S + RT+ P+   P L++                
Sbjct: 320  FLNYCKIPQHLPVTIACHNKERCWSASSENRTAAPFESHPKLLLV--------------- 364

Query: 1483 XXXXXXXXXXYPPFPEAITFGQDRKKLGITCHHPKLILLQREDSIRVIITSVNLVPQ--- 1313
                      +P FPE I FG+DRKK G+ CHHPKLI+LQREDS+RVI+TS NLVP+   
Sbjct: 365  ----------FPRFPEDIAFGKDRKKQGVACHHPKLIVLQREDSMRVIVTSANLVPRQWH 414

Query: 1312 -----------------------------------QLAKFMASLVADVPSQADWIMELTN 1238
                                               QL  F+AS+V +V SQA WI E+  
Sbjct: 415  LITNTVWWQDFPCRTSPDYAALFSAAKKQKSDFAAQLVSFIASMVNEVRSQAYWITEVAK 474

Query: 1237 YDFKGAVGHLVASITEIHSPRIPYISESRYFLMASNIV 1124
            YDF+GA G+L+AS+  IH+ + PY+ ES YFL A + V
Sbjct: 475  YDFEGAGGYLIASVPGIHA-QSPYL-ESNYFLSAKHNV 510


>ref|NP_001168462.1| hypothetical protein [Zea mays] gi|223948435|gb|ACN28301.1| unknown
            [Zea mays] gi|414587433|tpg|DAA38004.1| TPA: hypothetical
            protein ZEAMMB73_810727 [Zea mays]
          Length = 989

 Score =  144 bits (363), Expect = 1e-31
 Identities = 88/218 (40%), Positives = 115/218 (52%), Gaps = 38/218 (17%)
 Frame = -3

Query: 1663 FLSYYEILVDLLVTIACHYVGRCWSSSPDERTSVPYSDFPYLVVXXXXXXXXXXXXXXXX 1484
            FL+Y +I   L VTIACH   RCWS+S + RT+ P+   P L++                
Sbjct: 320  FLNYCKIPQHLPVTIACHNKERCWSASSENRTAAPFESHPKLLLV--------------- 364

Query: 1483 XXXXXXXXXXYPPFPEAITFGQDRKKLGITCHHPKLILLQREDSIRVIITSVNLVPQ--- 1313
                      +P FPE I FG+DRKK G+ CHHPKLI+LQREDS+RVI+TS NLVP+   
Sbjct: 365  ----------FPRFPEDIAFGKDRKKQGVACHHPKLIVLQREDSMRVIVTSANLVPRQWH 414

Query: 1312 -----------------------------------QLAKFMASLVADVPSQADWIMELTN 1238
                                               QL  F+AS+V +V SQA WI E+  
Sbjct: 415  LITNTVWWQDFPCRTSPDYAALFSAAKKQKSDFAAQLVSFIASMVNEVRSQAYWITEVAK 474

Query: 1237 YDFKGAVGHLVASITEIHSPRIPYISESRYFLMASNIV 1124
            YDF+GA G+L+AS+  IH+ + PY+ ES YFL A + V
Sbjct: 475  YDFEGAGGYLIASVPGIHA-QSPYL-ESNYFLSAKHNV 510


>gb|EEE60932.1| hypothetical protein OsJ_14671 [Oryza sativa Japonica Group]
          Length = 1021

 Score =  140 bits (354), Expect = 1e-30
 Identities = 81/218 (37%), Positives = 113/218 (51%), Gaps = 38/218 (17%)
 Frame = -3

Query: 1663 FLSYYEILVDLLVTIACHYVGRCWSSSPDERTSVPYSDFPYLVVXXXXXXXXXXXXXXXX 1484
            FL Y ++  +L VTIACH   RCWS+S + RT+ P+  +P L++                
Sbjct: 332  FLDYCKVPQNLPVTIACHNKERCWSASRESRTAAPFGSYPNLLLV--------------- 376

Query: 1483 XXXXXXXXXXYPPFPEAITFGQDRKKLGITCHHPKLILLQREDSIRVIITSVNLVPQ--- 1313
                      YP FPE I FG+DRKK G+ CHHPKL++LQR+DS+RVI+TS NLVP+   
Sbjct: 377  ----------YPQFPEEIAFGKDRKKQGVACHHPKLLVLQRKDSMRVIVTSANLVPRQWH 426

Query: 1312 -----------------------------------QLAKFMASLVADVPSQADWIMELTN 1238
                                               QL  F+A L+ +VPSQ+ WI E+  
Sbjct: 427  LITNTVWWQDFPCRTSTDYSALFSKVEESKSDFATQLVSFIAFLINEVPSQSYWINEIAK 486

Query: 1237 YDFKGAVGHLVASITEIHSPRIPYISESRYFLMASNIV 1124
            Y+F+GA G+L+AS+  I++ R P+  ES Y L    I+
Sbjct: 487  YNFEGAAGYLIASVPGIYA-RNPHYLESNYCLSRKQIL 523


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