BLASTX nr result

ID: Panax21_contig00008117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008117
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780...    97   3e-18
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...    93   4e-17
ref|XP_003533381.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    93   5e-17
ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_003532494.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    90   4e-16

>ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780157 [Glycine max]
          Length = 733

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 54/102 (52%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
 Frame = -1

Query: 562 DSGFKVRDFGKILRLAWAQERG----------XXXXXXXXXXXXXXXXXXXXXXXXELDL 413
           DSGFKVRD GKIL L+WAQE+G                                  +LDL
Sbjct: 477 DSGFKVRDLGKILHLSWAQEQGCSEEFCCADKRKCCGQSETIKPTNPQELLPSVSRDLDL 536

Query: 412 NVASVPDLNEELIPPFESSRDEDNGCAFGRAVELDDDVASLD 287
           NV SVPDLNEEL PPFESSRDEDNGC   +AVE DDD AS D
Sbjct: 537 NVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHD 578


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 59/124 (47%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
 Frame = -1

Query: 631 ENCQVGG-SSIANTEHKTAADVESDSGFKVRDFGKILRLAWAQERGXXXXXXXXXXXXXX 455
           EN   GG +S  N + +TA  V S SGFKVRD GKIL LA AQ++G              
Sbjct: 439 ENTITGGCTSSYNRDSETATGVNS-SGFKVRDLGKILHLAGAQQQGCFEGFCSADTEKCC 497

Query: 454 XXXXXXXXXXE----------LDLNVASVPDLNEELIPPFESSRDEDNGCAFGRAVELDD 305
                                LDLNV S+PDLNEEL PPFESSRDEDNGC   +A+E DD
Sbjct: 498 GASKLVKLQTSEDPVPSVSHGLDLNVVSMPDLNEELTPPFESSRDEDNGCTLEQAIEADD 557

Query: 304 DVAS 293
           D AS
Sbjct: 558 DAAS 561


>ref|XP_003533381.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 651

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 53/102 (51%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
 Frame = -1

Query: 562 DSGFKVRDFGKILRLAWAQERGXXXXXXXXXXXXXXXXXXXXXXXX----------ELDL 413
           DSGFKVRD GKIL L+WAQE+G                                  +LDL
Sbjct: 394 DSGFKVRDLGKILHLSWAQEQGCFEEFCCADKRNCCGKSETIKPTNLQEQLPSVSRDLDL 453

Query: 412 NVASVPDLNEELIPPFESSRDEDNGCAFGRAVELDDDVASLD 287
           NV SVPDLNEEL P FESSRDEDNGC   +AVE DDD AS D
Sbjct: 454 NVVSVPDLNEELTPLFESSRDEDNGCTLQQAVEADDDAASHD 495


>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
           gi|223545526|gb|EEF47031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 56/124 (45%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
 Frame = -1

Query: 628 NCQVGGSSIANTEHKTAADVESDSGFKVRDFGKILRLAWAQERGXXXXXXXXXXXXXXXX 449
           N   GG S +  E K+     + SGFKVR+ GKIL LAWAQ++G                
Sbjct: 452 NSLEGGMSGSRRESKST----NSSGFKVRELGKILHLAWAQKQGCFEGFCSADTEKCCGA 507

Query: 448 XXXXXXXXE----------LDLNVASVPDLNEELIPPFESSRDEDNGCAFGRAVELDDDV 299
                              LDLNV SVPDLNEEL PP ESSRDEDNGC   + VE DDD 
Sbjct: 508 TEVTKPETPEDELPSISRGLDLNVVSVPDLNEELTPPLESSRDEDNGCTLEQTVEADDDA 567

Query: 298 ASLD 287
           AS D
Sbjct: 568 ASHD 571


>ref|XP_003532494.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 645

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 52/101 (51%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
 Frame = -1

Query: 556 GFKVRDFGKILRLAWAQERGXXXXXXXXXXXXXXXXXXXXXXXX-----------ELDLN 410
           GFKVRD GK LRLAWAQE+G                                    LDLN
Sbjct: 389 GFKVRDLGKFLRLAWAQEQGYLEEFCCANVKNCCGQSEMVDKPRIPEAQLPSLSRVLDLN 448

Query: 409 VASVPDLNEELIPPFESSRDEDNGCAFGRAVELDDDVASLD 287
           V SVPDLNEEL PPFE SRDEDNGC+  +AVE DDD AS D
Sbjct: 449 VVSVPDLNEELTPPFEYSRDEDNGCSLLQAVEADDDAASHD 489


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