BLASTX nr result
ID: Panax21_contig00008099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008099
(714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 162 4e-59
ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu... 163 5e-59
ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig... 161 1e-58
ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group] g... 160 2e-58
gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indi... 160 2e-58
>ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product
[Vitis vinifera]
Length = 395
Score = 162 bits (409), Expect(2) = 4e-59
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQPRSQPIPVH 382
KQISTPVRVQGLE+V+LIAVGAFHNLALLEDG LWAWGNNEYGQLGTGDTQPRSQPI V
Sbjct: 186 KQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQ 245
Query: 383 GLSDLTLVDIAAGGWHSTAITGEGEVF 463
GLSDLTLVDIAAGGWHSTA+T +G V+
Sbjct: 246 GLSDLTLVDIAAGGWHSTALTDDGGVY 272
Score = 92.8 bits (229), Expect(2) = 4e-59
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 4 KLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 126
KLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP
Sbjct: 151 KLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 191
Score = 62.4 bits (150), Expect = 9e-08
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLI--AVGAFHNLALLEDGSLWAWGNNEYGQLG--------TGDT 352
K + P +V+ L K++ A+G +H LA+ + G +AWG NEYGQ G TG
Sbjct: 78 KTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRP 137
Query: 353 QPRSQPIPVHGLSDLTLVDIAAGGWHSTAITGEGEVF 463
R IP S L++ +AAGG HS +T EG V+
Sbjct: 138 LRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVW 174
>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 393
Score = 163 bits (412), Expect(2) = 5e-59
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQPRSQPIPVH 382
KQIS PVRVQGLE+VKLIAVGAFHNLAL EDG+LWAWGNNEYGQLGTGDTQPRSQPIPV
Sbjct: 185 KQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244
Query: 383 GLSDLTLVDIAAGGWHSTAITGEGEVF 463
GLS LTLVDIAAGGWHSTA+T +GEV+
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDDGEVY 271
Score = 91.3 bits (225), Expect(2) = 5e-59
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +1
Query: 1 PKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 126
PKL VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIS P
Sbjct: 149 PKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVP 190
Score = 62.4 bits (150), Expect = 9e-08
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLI--AVGAFHNLALLEDGSLWAWGNNEYGQLG--------TGDT 352
K + P +V+ L V ++ A+G +H LA+ + G +AWG NEYGQ G TG T
Sbjct: 77 KTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKT 136
Query: 353 QPRSQPIPVHGLSDLTLVDIAAGGWHSTAITGEGEVF 463
R IP L + +AAGG HS +T EG V+
Sbjct: 137 LRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVW 173
Score = 57.0 bits (136), Expect = 4e-06
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 242 RVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLG-TGDTQPRSQPIPVHGLSDLTLVDIAA 418
+V+ + G+ ++LA+ +DG L+ WG N+ G LG +T+ + P V L+++ +V A
Sbjct: 39 KVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAI 98
Query: 419 GGWHSTAITGEGEVF 463
GGWH A+ +G +
Sbjct: 99 GGWHCLAVDDQGRAY 113
>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 161 bits (408), Expect(2) = 1e-58
Identities = 77/87 (88%), Positives = 81/87 (93%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQPRSQPIPVH 382
KQIS PVRVQGLE V+LIAVGAFHNLAL EDG+LWAWGNNEYGQLGTGDTQPRSQPI V
Sbjct: 189 KQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQ 248
Query: 383 GLSDLTLVDIAAGGWHSTAITGEGEVF 463
GLSDLTLVDIAAGGWHSTA+T EGEV+
Sbjct: 249 GLSDLTLVDIAAGGWHSTALTDEGEVY 275
Score = 91.3 bits (225), Expect(2) = 1e-58
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +1
Query: 1 PKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 126
PKL VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIS P
Sbjct: 153 PKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVP 194
Score = 63.9 bits (154), Expect = 3e-08
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLI--AVGAFHNLALLEDGSLWAWGNNEYGQL--------GTGDT 352
K +TP +V+ L VK++ A+G +H LA+ + G +AWG NEYGQ GTG
Sbjct: 81 KTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRP 140
Query: 353 QPRSQPIPVHGLSDLTLVDIAAGGWHSTAITGEGEVF 463
R IP L + +AAGG HS +T EG V+
Sbjct: 141 LRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVW 177
>ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance
protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa
Japonica Group] gi|215734996|dbj|BAG95718.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein
OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 160 bits (406), Expect(2) = 2e-58
Identities = 77/87 (88%), Positives = 81/87 (93%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQPRSQPIPVH 382
KQISTPVRVQGLE VK+IAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPI V
Sbjct: 191 KQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVE 250
Query: 383 GLSDLTLVDIAAGGWHSTAITGEGEVF 463
GLSDL+LVDIAAGGWHSTA+T EGEV+
Sbjct: 251 GLSDLSLVDIAAGGWHSTALTKEGEVY 277
Score = 91.3 bits (225), Expect(2) = 2e-58
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 1 PKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 126
PKL VRQVAAGGTHSVVLT++GHVWTWGQPWPPGDIKQISTP
Sbjct: 155 PKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTP 196
Score = 58.5 bits (140), Expect = 1e-06
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 VKLIAVGAFHNLALLEDGSLWAWGNNEYGQLG-TGDTQPRSQPIPVHGLSDLTLVDIAAG 421
V + G+ ++LA+ DG L+ WG N+ G LG +T+ S P PV L+ +++V A G
Sbjct: 46 VSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIG 105
Query: 422 GWHSTAITGEGEVF 463
GWH A+ +G +
Sbjct: 106 GWHCLAVDDKGRAY 119
Score = 56.6 bits (135), Expect = 5e-06
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLI--AVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQP------ 358
K S+P V L V ++ A+G +H LA+ + G +AWG NEYGQ G +
Sbjct: 83 KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRA 142
Query: 359 --RSQPIPVHGLSDLTLVDIAAGGWHSTAITGEGEVF 463
R PIP L + +AAGG HS +T +G V+
Sbjct: 143 LRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVW 179
>gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 160 bits (406), Expect(2) = 2e-58
Identities = 77/87 (88%), Positives = 81/87 (93%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLIAVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQPRSQPIPVH 382
KQISTPVRVQGLE VK+IAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPI V
Sbjct: 191 KQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVE 250
Query: 383 GLSDLTLVDIAAGGWHSTAITGEGEVF 463
GLSDL+LVDIAAGGWHSTA+T EGEV+
Sbjct: 251 GLSDLSLVDIAAGGWHSTALTKEGEVY 277
Score = 91.3 bits (225), Expect(2) = 2e-58
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 1 PKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTP 126
PKL VRQVAAGGTHSVVLT++GHVWTWGQPWPPGDIKQISTP
Sbjct: 155 PKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTP 196
Score = 58.5 bits (140), Expect = 1e-06
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 VKLIAVGAFHNLALLEDGSLWAWGNNEYGQLG-TGDTQPRSQPIPVHGLSDLTLVDIAAG 421
V + G+ ++LA+ DG L+ WG N+ G LG +T+ S P PV L+ +++V A G
Sbjct: 46 VSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIG 105
Query: 422 GWHSTAITGEGEVF 463
GWH A+ +G +
Sbjct: 106 GWHCLAVDDKGRAY 119
Score = 57.4 bits (137), Expect = 3e-06
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Frame = +2
Query: 203 KQISTPVRVQGLERVKLI--AVGAFHNLALLEDGSLWAWGNNEYGQLGTGDTQP------ 358
K S+P V L V ++ A+G +H LA+ + G +AWG NEYGQ G +
Sbjct: 83 KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRA 142
Query: 359 --RSQPIPVHGLSDLTLVDIAAGGWHSTAITGEGEVF 463
R PIP L + +AAGG HS +T +G V+
Sbjct: 143 LRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVW 179