BLASTX nr result

ID: Panax21_contig00008083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008083
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02944.1| unnamed protein product [Arabidopsis thaliana]         99   5e-19
gb|AAM64337.1| mrp protein, putative [Arabidopsis thaliana] gi|3...    98   6e-19
ref|XP_002885645.1| high-chlorophyll-fluorescence 101 [Arabidops...    98   6e-19
ref|NP_189086.1| ATP binding protein [Arabidopsis thaliana] gi|4...    98   6e-19
ref|XP_003528907.1| PREDICTED: protein mrp homolog [Glycine max]       97   1e-18

>dbj|BAB02944.1| unnamed protein product [Arabidopsis thaliana]
          Length = 550

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = -2

Query: 499 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGSMVSGVINQLLTTTEWY 353
           NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRG MVSGVINQLLTTTEW+
Sbjct: 234 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWF 282


>gb|AAM64337.1| mrp protein, putative [Arabidopsis thaliana]
           gi|30502918|emb|CAD90253.1| putative PSI stabilising
           protein precursor [Arabidopsis thaliana]
          Length = 532

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 499 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGSMVSGVINQLLTTTEWYDILPIELD 329
           NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRG MVSGVINQLLTTTEW ++  + +D
Sbjct: 234 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVID 290


>ref|XP_002885645.1| high-chlorophyll-fluorescence 101 [Arabidopsis lyrata subsp.
           lyrata] gi|297331485|gb|EFH61904.1|
           high-chlorophyll-fluorescence 101 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 531

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 499 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGSMVSGVINQLLTTTEWYDILPIELD 329
           NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRG MVSGVINQLLTTTEW ++  + +D
Sbjct: 233 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVID 289


>ref|NP_189086.1| ATP binding protein [Arabidopsis thaliana]
           gi|40950525|gb|AAR97892.1| [4Fe-4S] cluster assembly
           factor [Arabidopsis thaliana]
           gi|110740872|dbj|BAE98532.1| putative mrp protein
           [Arabidopsis thaliana] gi|332643376|gb|AEE76897.1| ATP
           binding protein [Arabidopsis thaliana]
          Length = 532

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 499 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGSMVSGVINQLLTTTEWYDILPIELD 329
           NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRG MVSGVINQLLTTTEW ++  + +D
Sbjct: 234 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVID 290


>ref|XP_003528907.1| PREDICTED: protein mrp homolog [Glycine max]
          Length = 533

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/74 (70%), Positives = 58/74 (78%), Gaps = 7/74 (9%)
 Frame = -2

Query: 499 NPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGSMVSGVINQLLTTTEW--YDILPIEL-- 332
           NPEKKTIIPTEY+GVKL+SFGFAGQGRAIMRG MVSGVINQLLTTTEW   D L I++  
Sbjct: 236 NPEKKTIIPTEYLGVKLISFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLIIDMPP 295

Query: 331 ---DSQINFKYVLP 299
              D Q+    V+P
Sbjct: 296 GTGDIQLTLCQVVP 309


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