BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008080
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30093.3| unnamed protein product [Vitis vinifera]              304   2e-80
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   304   2e-80
ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   299   9e-79
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   297   2e-78

>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  304 bits (779), Expect = 2e-80
 Identities = 153/210 (72%), Positives = 179/210 (85%)
 Frame = -3

Query: 850 CLSSFVDEGSTESHRYYLSRRTLLEMLKDRGYSIPDSEINLSLQEFRNIHGQTPDTDRLR 671
           CLSSFVDEG  ESHRYYL+RRTLLEML+DRGYSIP  +I++SLQ+FR+ + Q PD DRLR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 670 ISASHQSKPSNKILAIFCGFGVVKVNVVRSLATQIMNKESLNRLILVVQNKITDQAKKVL 491
           ISA+ +S PS KIL IFCG  VVKVN +RS+ATQI+NK+SL++LILV+QN IT QA K +
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240

Query: 490 DLFSFKVEIFQITDLLVNITKHELKPKHRVLSNEEKQELLKKYSLEEKQLPRIPLNDAIA 311
           DLFSF+VE FQITDLLVNITKH LKPKHRVL+++EK +LLKKYSL EKQLPR+   DAIA
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300

Query: 310 RYYAHEKGQVVQVTYNGEITEFYVTYRCVW 221
           RYY  EKGQVV+V YNGEIT  +VTYRCVW
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  304 bits (779), Expect = 2e-80
 Identities = 153/210 (72%), Positives = 179/210 (85%)
 Frame = -3

Query: 850 CLSSFVDEGSTESHRYYLSRRTLLEMLKDRGYSIPDSEINLSLQEFRNIHGQTPDTDRLR 671
           CLSSFVDEG  ESHRYYL+RRTLLEML+DRGYSIP  +I++SLQ+FR+ + Q PD DRLR
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 670 ISASHQSKPSNKILAIFCGFGVVKVNVVRSLATQIMNKESLNRLILVVQNKITDQAKKVL 491
           ISA+ +S PS KIL IFCG  VVKVN +RS+ATQI+NK+SL++LILV+QN IT QA K +
Sbjct: 80  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139

Query: 490 DLFSFKVEIFQITDLLVNITKHELKPKHRVLSNEEKQELLKKYSLEEKQLPRIPLNDAIA 311
           DLFSF+VE FQITDLLVNITKH LKPKHRVL+++EK +LLKKYSL EKQLPR+   DAIA
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199

Query: 310 RYYAHEKGQVVQVTYNGEITEFYVTYRCVW 221
           RYY  EKGQVV+V YNGEIT  +VTYRCVW
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229


>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  304 bits (778), Expect = 3e-80
 Identities = 146/210 (69%), Positives = 178/210 (84%)
 Frame = -3

Query: 850 CLSSFVDEGSTESHRYYLSRRTLLEMLKDRGYSIPDSEINLSLQEFRNIHGQTPDTDRLR 671
           CLSSFVDEGSTESHRYYLSRRT+LEMLKDRGYS+P SEI++SLQ+FR ++GQ PD + L+
Sbjct: 7   CLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLK 66

Query: 670 ISASHQSKPSNKILAIFCGFGVVKVNVVRSLATQIMNKESLNRLILVVQNKITDQAKKVL 491
            SA+H+S PS ++L IFCG GVVKV ++R +  QI +++SL  LILV+QN IT+QA K L
Sbjct: 67  FSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKAL 126

Query: 490 DLFSFKVEIFQITDLLVNITKHELKPKHRVLSNEEKQELLKKYSLEEKQLPRIPLNDAIA 311
           DLF FK+EIFQITDLLVNITKH LKPKH+VLS + KQ LLKKYS+EEKQLPR+   DAI+
Sbjct: 127 DLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDAIS 186

Query: 310 RYYAHEKGQVVQVTYNGEITEFYVTYRCVW 221
           RYY  E+GQVV+VTY+G+IT  +VTYRCVW
Sbjct: 187 RYYGLERGQVVKVTYDGDITGSHVTYRCVW 216


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  299 bits (765), Expect = 9e-79
 Identities = 141/211 (66%), Positives = 179/211 (84%)
 Frame = -3

Query: 853 TCLSSFVDEGSTESHRYYLSRRTLLEMLKDRGYSIPDSEINLSLQEFRNIHGQTPDTDRL 674
           TCLSS++D+G+TESHRY+LSRRT++EMLKDRGY+I    I+ SLQ+FR   GQ PD DRL
Sbjct: 17  TCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRL 76

Query: 673 RISASHQSKPSNKILAIFCGFGVVKVNVVRSLATQIMNKESLNRLILVVQNKITDQAKKV 494
           ++SA+H S PS ++L +FCG G VKVN +R++A QI NK+SL+ LIL+VQN+IT+QA K 
Sbjct: 77  KLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKA 136

Query: 493 LDLFSFKVEIFQITDLLVNITKHELKPKHRVLSNEEKQELLKKYSLEEKQLPRIPLNDAI 314
           ++LFSFKVEIFQITDLLVNITKH LKP H+VL+ EEKQ+LLK+YS+EEKQLPR+   DAI
Sbjct: 137 VELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAI 196

Query: 313 ARYYAHEKGQVVQVTYNGEITEFYVTYRCVW 221
           ARYY  EKGQVV+VTY+G++T  ++TYRCVW
Sbjct: 197 ARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  297 bits (761), Expect = 2e-78
 Identities = 143/210 (68%), Positives = 178/210 (84%)
 Frame = -3

Query: 850 CLSSFVDEGSTESHRYYLSRRTLLEMLKDRGYSIPDSEINLSLQEFRNIHGQTPDTDRLR 671
           C SS+ D+G+ E+HRYYLSRRT+LEML+DRGYS+P SEI+LSLQEFR IHG  PD DRL+
Sbjct: 29  CFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLK 88

Query: 670 ISASHQSKPSNKILAIFCGFGVVKVNVVRSLATQIMNKESLNRLILVVQNKITDQAKKVL 491
            SA+H S PS ++L +F G G++KV+ +R++A QI+NK+SL  LILV+QN+IT+QA K +
Sbjct: 89  FSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAV 148

Query: 490 DLFSFKVEIFQITDLLVNITKHELKPKHRVLSNEEKQELLKKYSLEEKQLPRIPLNDAIA 311
           DLF FKVE+FQITDLLVNITKH LKPKH+VL++ EKQ+LLK Y +EEKQLPR+   DAIA
Sbjct: 149 DLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDAIA 208

Query: 310 RYYAHEKGQVVQVTYNGEITEFYVTYRCVW 221
           RYY  EKGQVV+VTY+GEITE +VTYRCVW
Sbjct: 209 RYYGLEKGQVVKVTYSGEITESHVTYRCVW 238