BLASTX nr result

ID: Panax21_contig00008079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008079
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit ...   277   5e-72
gb|ABK95003.1| unknown [Populus trichocarpa]                          274   4e-71
ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus co...   270   6e-70
ref|XP_002267676.1| PREDICTED: pyruvate dehydrogenase E1 compone...   267   5e-69
ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68

>gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]
          Length = 431

 Score =  277 bits (708), Expect = 5e-72
 Identities = 133/140 (95%), Positives = 139/140 (99%)
 Frame = +1

Query: 817  KSNTSLTNLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSSGFI 996
            KS +S++NLLITKEEGLE+YEDM+LGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVS+GFI
Sbjct: 71   KSKSSISNLLITKEEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFI 130

Query: 997  KLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGG 1176
            KLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGG
Sbjct: 131  KLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGG 190

Query: 1177 FAFIGEGIPVATGAAFTSKY 1236
            FAFIGEGIPVATGAAFTSKY
Sbjct: 191  FAFIGEGIPVATGAAFTSKY 210


>gb|ABK95003.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  274 bits (700), Expect = 4e-71
 Identities = 149/214 (69%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
 Frame = +1

Query: 607  PLPLNSTTARSPEK--LLFDPXXXXXXXXXXXXXXXXXTNKFRLSRPNSA--TALPRXXX 774
            P  LN TT+RS EK    FDP                 T K RLS  + +   A P    
Sbjct: 15   PFSLNGTTSRSHEKHQSFFDPLRTAPSSSSFLGS----TRKLRLSSASKSKLVANPNRRS 70

Query: 775  XXXXXXXXXXXXXLKSNTSLTNLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFV 954
                         +KS T   NLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFV
Sbjct: 71   AVVAVSDVVKEKKVKSTT---NLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFV 127

Query: 955  HLYNGQEAVSSGFIKLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGG 1134
            HLYNGQEAVS+GFIKLLK+EDSVVSTYRDHVHALSKGVPAR VMSELFGKTTGCCRGQGG
Sbjct: 128  HLYNGQEAVSTGFIKLLKREDSVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGG 187

Query: 1135 SMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKY 1236
            SMHMFSKEHN++GGFAFIGEGIPVATGAAF+SKY
Sbjct: 188  SMHMFSKEHNLIGGFAFIGEGIPVATGAAFSSKY 221


>ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis]
            gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase,
            putative [Ricinus communis]
          Length = 433

 Score =  270 bits (690), Expect = 6e-70
 Identities = 144/216 (66%), Positives = 160/216 (74%), Gaps = 3/216 (1%)
 Frame = +1

Query: 598  MIHPLPLNSTTARSPEKLLFDPXXXXXXXXXXXXXXXXXTNKFRLS---RPNSATALPRX 768
            +I PLP+++T + +  + LFDP                 T+K R S   + N  ++  R 
Sbjct: 10   LIQPLPVDNTRSYNKHQPLFDP-------LKTTSSFIGSTSKLRFSALPKLNHVSSFRRS 62

Query: 769  XXXXXXXXXXXXXXXLKSNTSLTNLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFG 948
                            K   S +NLLITKEEGL +YEDM+LGRAFEDMCAQMYYRGKMFG
Sbjct: 63   AIVAVSEAVKE-----KKLKSTSNLLITKEEGLVLYEDMVLGRAFEDMCAQMYYRGKMFG 117

Query: 949  FVHLYNGQEAVSSGFIKLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQ 1128
            FVHLYNGQEAVS+GFIKLLKKEDSVVSTYRDHVHALSKGVPAR VMSELFGKTTGCCRGQ
Sbjct: 118  FVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQ 177

Query: 1129 GGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKY 1236
            GGSMHMFSK+HNVLGGFAFIGEGIPVATGAAFTSKY
Sbjct: 178  GGSMHMFSKDHNVLGGFAFIGEGIPVATGAAFTSKY 213


>ref|XP_002267676.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha [Vitis
            vinifera] gi|296089009|emb|CBI38712.3| unnamed protein
            product [Vitis vinifera]
          Length = 433

 Score =  267 bits (682), Expect = 5e-69
 Identities = 148/218 (67%), Positives = 157/218 (72%), Gaps = 5/218 (2%)
 Frame = +1

Query: 598  MIHPLPLNSTTARSPEK--LLFDPXXXXXXXXXXXXXXXXXTNKFR---LSRPNSATALP 762
            +I PLPL     RSP+K   LFD                  T+K R   LS+PN     P
Sbjct: 10   IIQPLPL-----RSPDKPQTLFD-------HLKTTSTFLGSTSKLRSVSLSKPNLPN--P 55

Query: 763  RXXXXXXXXXXXXXXXXLKSNTSLTNLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKM 942
                              KS  S + LLIT+EEGLE+YEDM+LGRAFEDMCAQMYYRGKM
Sbjct: 56   HRRSTVVAVSDVLKEKKTKSAASSSQLLITREEGLELYEDMVLGRAFEDMCAQMYYRGKM 115

Query: 943  FGFVHLYNGQEAVSSGFIKLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCR 1122
            FGFVHLYNGQEAVS+GFIKLLKKED VVSTYRDHVHALSKGVPAR VMSELFGK TGCCR
Sbjct: 116  FGFVHLYNGQEAVSTGFIKLLKKEDCVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 175

Query: 1123 GQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKY 1236
            GQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKY
Sbjct: 176  GQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKY 213


>ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|222843168|gb|EEE80715.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  264 bits (675), Expect = 3e-68
 Identities = 126/133 (94%), Positives = 132/133 (99%)
 Frame = +1

Query: 838  NLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSSGFIKLLKKED 1017
            N+LITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVS+GFIKLLK+ED
Sbjct: 2    NMLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKRED 61

Query: 1018 SVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 1197
            SVVSTYRDHVHALSKGVPAR VMSELFGKTTGCCRGQGGSMHMFSKEHN++GGFAFIGEG
Sbjct: 62   SVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEG 121

Query: 1198 IPVATGAAFTSKY 1236
            IPVATGAAF+SKY
Sbjct: 122  IPVATGAAFSSKY 134


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