BLASTX nr result

ID: Panax21_contig00008078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008078
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20540.3| unnamed protein product [Vitis vinifera]              310   3e-82
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l...   310   3e-82
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici...   282   8e-74
ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l...   279   7e-73
gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis t...   235   1e-59

>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  310 bits (795), Expect = 3e-82
 Identities = 177/300 (59%), Positives = 210/300 (70%)
 Frame = -1

Query: 903 MEVEVRVVAGIESCFVSLPLYLIQTLESTRSGSGPLPPFLALELHSRDSDQLWHVXXXXX 724
           ME+ VR V GIESCFVSLPL LIQTL+ST SG   LPP LALEL S ++D +W V     
Sbjct: 1   MELAVRTVGGIESCFVSLPLPLIQTLQSTSSGL--LPPVLALELRSSNND-VWVVAWSGS 57

Query: 723 XXXXXXXAIEIAQQFAECIYLSDHTIVQVRAVPNLPKATLVTIEPHTEDDWEVXXXXXXX 544
                   IE+A+QFAECI L DHT VQVRAV NLPKATLVTIEPHTEDDWEV       
Sbjct: 58  ASTSSS--IEVARQFAECISLPDHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELNAEH 115

Query: 543 XXASILKQVGLVHEGMRFPLWLRGRTIITFLVVSTSPKNHIVQLKPGTEVAVAPKRRKTN 364
             A+ILKQ+G+VHE MRFPLWL GRT ITFLVVST PK  +VQL PGTEVAVAPKRRK  
Sbjct: 116 AEAAILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKAVVQLVPGTEVAVAPKRRKKY 175

Query: 363 VNSSGDSSVPSEDKNHLTTKALLRIQDPDSRFIHNCEINGLEMGVVITSAVFIHPETATN 184
           ++S  ++ V S +K+H   KALLR+QD   + IH  E+ G+E+GVV+T+ V+IHPETA N
Sbjct: 176 LDSHKNALVQSSNKDHPIAKALLRVQDSGQKLIHKSEVKGVELGVVLTNVVYIHPETARN 235

Query: 183 YSFDSLQFVIIEPRLAPKESKTNHETDKQKVRSSIAKEVNHGVPIGKQDYRHTVVRLLIS 4
           YSFDSLQ VI+ PR +P +   N     +K   S AKE + G+   K++    VVRLLIS
Sbjct: 236 YSFDSLQLVILVPR-SPSKGNYNDTDMFRKKSISTAKEFSDGL-ADKKEPCQVVVRLLIS 293


>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
          Length = 1134

 Score =  310 bits (795), Expect = 3e-82
 Identities = 177/300 (59%), Positives = 210/300 (70%)
 Frame = -1

Query: 903 MEVEVRVVAGIESCFVSLPLYLIQTLESTRSGSGPLPPFLALELHSRDSDQLWHVXXXXX 724
           ME+ VR V GIESCFVSLPL LIQTL+ST SG   LPP LALEL S ++D +W V     
Sbjct: 1   MELAVRTVGGIESCFVSLPLPLIQTLQSTSSGL--LPPVLALELRSSNND-VWVVAWSGS 57

Query: 723 XXXXXXXAIEIAQQFAECIYLSDHTIVQVRAVPNLPKATLVTIEPHTEDDWEVXXXXXXX 544
                   IE+A+QFAECI L DHT VQVRAV NLPKATLVTIEPHTEDDWEV       
Sbjct: 58  ASTSSS--IEVARQFAECISLPDHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELNAEH 115

Query: 543 XXASILKQVGLVHEGMRFPLWLRGRTIITFLVVSTSPKNHIVQLKPGTEVAVAPKRRKTN 364
             A+ILKQ+G+VHE MRFPLWL GRT ITFLVVST PK  +VQL PGTEVAVAPKRRK  
Sbjct: 116 AEAAILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKAVVQLVPGTEVAVAPKRRKKY 175

Query: 363 VNSSGDSSVPSEDKNHLTTKALLRIQDPDSRFIHNCEINGLEMGVVITSAVFIHPETATN 184
           ++S  ++ V S +K+H   KALLR+QD   + IH  E+ G+E+GVV+T+ V+IHPETA N
Sbjct: 176 LDSHKNALVQSSNKDHPIAKALLRVQDSGQKLIHKSEVKGVELGVVLTNVVYIHPETARN 235

Query: 183 YSFDSLQFVIIEPRLAPKESKTNHETDKQKVRSSIAKEVNHGVPIGKQDYRHTVVRLLIS 4
           YSFDSLQ VI+ PR +P +   N     +K   S AKE + G+   K++    VVRLLIS
Sbjct: 236 YSFDSLQLVILVPR-SPSKGNYNDTDMFRKKSISTAKEFSDGL-ADKKEPCQVVVRLLIS 293


>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
           gi|223543202|gb|EEF44734.1| peroxisome biogenesis
           factor, putative [Ricinus communis]
          Length = 1137

 Score =  282 bits (722), Expect = 8e-74
 Identities = 158/301 (52%), Positives = 199/301 (66%), Gaps = 1/301 (0%)
 Frame = -1

Query: 903 MEVEVRVVAGIESCFVSLPLYLIQTLESTRSGSGPLPPFLALELHSRDSDQLWHVXXXXX 724
           ME EV+ V+GIE+CF+SLP+ LIQTLESTR G       L LEL S  +D  W V     
Sbjct: 1   MEFEVKHVSGIENCFISLPIQLIQTLESTRPGDFH-SQILTLELRSSTTDHQWVVAWSGA 59

Query: 723 XXXXXXXAIEIAQQFAECIYLSDHTIVQVRAVPNLPKATLVTIEPHTEDDWEVXXXXXXX 544
                   IE+A+QFA+CI L D   V+VRAV N+  ATLVTIEP +EDDWEV       
Sbjct: 60  TSSSSA--IEVARQFADCISLPDRISVKVRAVSNVASATLVTIEPSSEDDWEVLELNADL 117

Query: 543 XXASILKQVGLVHEGMRFPLWLRGRTIITFLVVSTSPKNHIVQLKPGTEVAVAPKRRKTN 364
             A+IL QV +VHE M+FPLWL GRTIITF VVST PK  +VQL PGTEVAVAPKRRKT+
Sbjct: 118 AEAAILNQVRIVHETMKFPLWLHGRTIITFHVVSTLPKKAVVQLVPGTEVAVAPKRRKTD 177

Query: 363 VNSSGDSSVPSEDKNHLTTKALLRIQDPDSRFIHNCEINGLEMGVVITSAVFIHPETATN 184
           +N      + S  K    TKALLR+QD D R +H  E+ G+E+GVV+TS  +IHPETAT 
Sbjct: 178 LNK---QDLQSSSKEFKITKALLRLQDSDRRLLHRREVEGVELGVVLTSVAYIHPETATR 234

Query: 183 YSFDSLQFVIIEPRLAPKESKTNHETDKQKVRSSIA-KEVNHGVPIGKQDYRHTVVRLLI 7
           +S DSLQ V I PRL+ KE+    E+D  + ++S A KE+ + +   K++YR  +VR++ 
Sbjct: 235 FSLDSLQLVTIVPRLSSKETIRTPESDVSRTKNSSALKEIKNDILTDKKEYRQAIVRIVF 294

Query: 6   S 4
           S
Sbjct: 295 S 295


>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
          Length = 1130

 Score =  279 bits (714), Expect = 7e-73
 Identities = 160/301 (53%), Positives = 197/301 (65%), Gaps = 1/301 (0%)
 Frame = -1

Query: 903 MEVEVRVVAGIESCFVSLPLYLIQTLESTRSGSGPLPPFLALELHSRDSDQLWHVXXXXX 724
           ME+EV+VV GI+SCFVSLPL LIQTL+STRS   P+P  LALEL S              
Sbjct: 1   MELEVQVVGGIDSCFVSLPLSLIQTLQSTRSS--PIPQILALELRSPTHPPHTWFVAWSG 58

Query: 723 XXXXXXXAIEIAQQFAECIYLSDHTIVQVRAVPNLPKATLVTIEPHTEDDWEVXXXXXXX 544
                  AIE++ QFAEC+ L +H  VQVRA PN+P A+LVTIEPHTEDDWE+       
Sbjct: 59  ATSSSSSAIEVSPQFAECVSLPNHATVQVRAAPNVPHASLVTIEPHTEDDWEILELNADQ 118

Query: 543 XXASILKQVGLVHEGMRFPLWLRGRTIITFLVVSTSPKNHIVQLKPGTEVAVAPKRRKTN 364
             A IL QV +VHEGMRFPLWL G T+ITF V S  PKN +VQL PGTEVAVAPKRRK +
Sbjct: 119 AEAQILSQVRIVHEGMRFPLWLHGHTVITFQVASVFPKNVVVQLMPGTEVAVAPKRRKKS 178

Query: 363 VNSSGDSSVPSEDKNHLTTKALLRIQDPDSRFIHNCEINGLEMGVVITSAVFIHPETATN 184
            +S+GDS + S +K H T K LLR+QDPD     +  + G+E+ V +TS  F+HPETA  
Sbjct: 179 SDSAGDSHLDSSNKEH-TAKMLLRLQDPDGLCSTSTHVKGVELHVGLTSVAFVHPETAKK 237

Query: 183 YSFDSLQFVIIEPRLAPKESKTNHETDKQKVRSSIA-KEVNHGVPIGKQDYRHTVVRLLI 7
           YSF+ LQ V I PR+  KE+     ++  K +S  A  EV +G    K +YR T+V+LLI
Sbjct: 238 YSFNMLQLVSIVPRVT-KENVNISRSNIMKAKSGPATNEVENGY-TDKTEYRQTIVQLLI 295

Query: 6   S 4
           S
Sbjct: 296 S 296


>gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]
          Length = 1119

 Score =  235 bits (599), Expect = 1e-59
 Identities = 139/303 (45%), Positives = 180/303 (59%), Gaps = 2/303 (0%)
 Frame = -1

Query: 906 VMEVE--VRVVAGIESCFVSLPLYLIQTLESTRSGSGPLPPFLALELHSRDSDQLWHVXX 733
           VME E  V  VAG++ CFVSLP  L+  L+ST   S PLPP L +EL  R  D+ W V  
Sbjct: 2   VMETEAVVNTVAGVD-CFVSLPRQLLHALQST--SSSPLPPLLPVEL--RSGDRRWSVAW 56

Query: 732 XXXXXXXXXXAIEIAQQFAECIYLSDHTIVQVRAVPNLPKATLVTIEPHTEDDWEVXXXX 553
                      IEIA+ FAE I L D T+V+VR +PN+PKATLVT+EP TEDDWEV    
Sbjct: 57  SGSSSSSSA--IEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELN 114

Query: 552 XXXXXASILKQVGLVHEGMRFPLWLRGRTIITFLVVSTSPKNHIVQLKPGTEVAVAPKRR 373
                A+IL QV ++HE M+FPLWL  RT+I F VVST P   +VQL PGTEVAVAPKRR
Sbjct: 115 AELAEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 174

Query: 372 KTNVNSSGDSSVPSEDKNHLTTKALLRIQDPDSRFIHNCEINGLEMGVVITSAVFIHPET 193
             N+ +       S++K     KALLR+Q+ D    H  ++ G E+ V +TS  +IHPET
Sbjct: 175 DRNLKAK-----KSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET 229

Query: 192 ATNYSFDSLQFVIIEPRLAPKESKTNHETDKQKVRSSIAKEVNHGVPIGKQDYRHTVVRL 13
           A  +S +SLQ + + PR+  K S    E    K  S  +K   +G    K++ R  ++RL
Sbjct: 230 AKKHSLESLQLISVSPRIPLKGSAKKDEALNMK-NSEASKVAENGTSSAKKEPRQAILRL 288

Query: 12  LIS 4
           + S
Sbjct: 289 VFS 291


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