BLASTX nr result

ID: Panax21_contig00008066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008066
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517858.1| 26S proteasome regulatory subunit rpn1, puta...   252   2e-65
ref|XP_003527419.1| PREDICTED: 26S proteasome non-ATPase regulat...   250   7e-65
ref|XP_002277029.1| PREDICTED: 26S proteasome non-ATPase regulat...   250   1e-64
ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulat...   248   3e-64
ref|NP_565477.1| 26S proteasome regulatory subunit N1 [Arabidops...   247   6e-64

>ref|XP_002517858.1| 26S proteasome regulatory subunit rpn1, putative [Ricinus communis]
           gi|223542840|gb|EEF44376.1| 26S proteasome regulatory
           subunit rpn1, putative [Ricinus communis]
          Length = 895

 Score =  252 bits (644), Expect = 2e-65
 Identities = 125/145 (86%), Positives = 135/145 (93%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   QYVKQVFTSSSDLLRKKQFCYVLARHGITFELDDEMCADDEDREALQEIVNNTKLSEGYL 182
           QYVKQVFT   D+LRKKQF Y++ARHGITFELDDE+ ADDEDREALQ+IVNNTKLSEGYL
Sbjct: 273 QYVKQVFTVCDDVLRKKQFSYIVARHGITFELDDEVAADDEDREALQDIVNNTKLSEGYL 332

Query: 183 TLARDIEVMEPKSPEDVYKAHLLDGRASAG--VDSARQNLAATFVNAFVNAGFGQDKLMT 356
           TLARDIEVMEPKSP+D+YKAHLLDGRASAG  VDSARQNLAATFVNAFVNAGFGQDKLMT
Sbjct: 333 TLARDIEVMEPKSPDDIYKAHLLDGRASAGVSVDSARQNLAATFVNAFVNAGFGQDKLMT 392

Query: 357 IPSEAPSDSSSGNWLFKNKEHGKAS 431
           +PS++ S  SSGNWLFKNKEHGKAS
Sbjct: 393 VPSDSSSGGSSGNWLFKNKEHGKAS 417


>ref|XP_003527419.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like
           [Glycine max]
          Length = 885

 Score =  250 bits (639), Expect = 7e-65
 Identities = 122/145 (84%), Positives = 136/145 (93%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   QYVKQVFTSSSDLLRKKQFCYVLARHGITFELDDEMCADDEDREALQEIVNNTKLSEGYL 182
           Q+V++VFTS +D+LRKKQFCY+LARHGITFELD+EM  DDEDRE LQEI+NN+KLSEGYL
Sbjct: 264 QHVREVFTSCNDVLRKKQFCYMLARHGITFELDEEMVPDDEDRELLQEIINNSKLSEGYL 323

Query: 183 TLARDIEVMEPKSPEDVYKAHLLDGRASAG--VDSARQNLAATFVNAFVNAGFGQDKLMT 356
           TLARDIEVMEPKSPED+YKAHLLDGRASAG  VDSARQNLAATFVNAFVNAGFGQDKLMT
Sbjct: 324 TLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMT 383

Query: 357 IPSEAPSDSSSGNWLFKNKEHGKAS 431
           +PS++ S +SSGNWLFKNKEHGK S
Sbjct: 384 VPSDSSSSASSGNWLFKNKEHGKTS 408


>ref|XP_002277029.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A [Vitis
           vinifera] gi|302143338|emb|CBI21899.3| unnamed protein
           product [Vitis vinifera]
          Length = 890

 Score =  250 bits (638), Expect = 1e-64
 Identities = 122/145 (84%), Positives = 134/145 (92%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   QYVKQVFTSSSDLLRKKQFCYVLARHGITFELDDEMCADDEDREALQEIVNNTKLSEGYL 182
           QYVKQ+FTS  DLL+KKQFCY+LARHG+ FELDDEM  D+++REALQ+I+NN+KLSEGYL
Sbjct: 268 QYVKQIFTSCDDLLQKKQFCYILARHGVAFELDDEMVVDNDEREALQDIINNSKLSEGYL 327

Query: 183 TLARDIEVMEPKSPEDVYKAHLLDGRASAG--VDSARQNLAATFVNAFVNAGFGQDKLMT 356
           TLARDIEVMEPKSPED+YKAHLLDGRASAG  VDSARQNLAATFVNAFVNAGFGQDKLMT
Sbjct: 328 TLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMT 387

Query: 357 IPSEAPSDSSSGNWLFKNKEHGKAS 431
           + SEA S  SSGNWLFKNKEHGKAS
Sbjct: 388 VASEASSGGSSGNWLFKNKEHGKAS 412


>ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like
           [Glycine max]
          Length = 885

 Score =  248 bits (634), Expect = 3e-64
 Identities = 120/145 (82%), Positives = 137/145 (94%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   QYVKQVFTSSSDLLRKKQFCYVLARHGITFELDDEMCADDEDREALQEIVNNTKLSEGYL 182
           Q+V++VFTS +D+LRKKQFCY+LARHGITFELD++M +DDEDRE LQEI+NN+KLSEGYL
Sbjct: 264 QHVREVFTSCNDVLRKKQFCYMLARHGITFELDEKMVSDDEDRELLQEIINNSKLSEGYL 323

Query: 183 TLARDIEVMEPKSPEDVYKAHLLDGRASAG--VDSARQNLAATFVNAFVNAGFGQDKLMT 356
           TLARDIEVMEPKSPED+YKAHLLDGRASAG  VDSARQNLAATFVNAFVNAGFGQDKLMT
Sbjct: 324 TLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMT 383

Query: 357 IPSEAPSDSSSGNWLFKNKEHGKAS 431
           +P+++ S +SSGNWLFKNKEHGK S
Sbjct: 384 VPTDSSSSASSGNWLFKNKEHGKTS 408


>ref|NP_565477.1| 26S proteasome regulatory subunit N1 [Arabidopsis thaliana]
           gi|75265911|sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S
           proteasome non-ATPase regulatory subunit 2 1A; AltName:
           Full=26S proteasome regulatory subunit RPN1 A;
           Short=AtRPN1a; AltName: Full=26S proteasome regulatory
           subunit S2 1A gi|13430608|gb|AAK25926.1|AF360216_1
           putative 26S proteasome regulatory subunit S2
           [Arabidopsis thaliana] gi|14532874|gb|AAK64119.1|
           putative 26S proteasome regulatory subunit S2
           [Arabidopsis thaliana] gi|20198043|gb|AAD21708.2| 26S
           proteasome regulatory subunit S2 (RPN1) [Arabidopsis
           thaliana] gi|32700010|gb|AAP86655.1| 26S proteasome
           subunit RPN1a [Arabidopsis thaliana]
           gi|330251938|gb|AEC07032.1| 26S proteasome regulatory
           subunit N1 [Arabidopsis thaliana]
          Length = 891

 Score =  247 bits (631), Expect = 6e-64
 Identities = 123/145 (84%), Positives = 136/145 (93%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   QYVKQVFTSSSDLLRKKQFCYVLARHGITFELDDEMCADDEDREALQEIVNNTKLSEGYL 182
           QYVKQVFTS +DLL+KKQFCY++ARHGITFELDDEM ADD+DREALQ+IVNNTKLSEGYL
Sbjct: 271 QYVKQVFTSCTDLLKKKQFCYMIARHGITFELDDEMVADDDDREALQDIVNNTKLSEGYL 330

Query: 183 TLARDIEVMEPKSPEDVYKAHLLDGRASAG--VDSARQNLAATFVNAFVNAGFGQDKLMT 356
           TLARDIEVME K+PED+YKAHLLDGRAS+G  VDSARQNLAATFVNAFVNAGFGQDKLMT
Sbjct: 331 TLARDIEVMEAKTPEDIYKAHLLDGRASSGASVDSARQNLAATFVNAFVNAGFGQDKLMT 390

Query: 357 IPSEAPSDSSSGNWLFKNKEHGKAS 431
           +PS++ +  SSGNWLFKNKEHGK S
Sbjct: 391 VPSDS-TTGSSGNWLFKNKEHGKTS 414