BLASTX nr result
ID: Panax21_contig00008043
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008043 (1012 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 99 1e-18 ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 80 1e-12 emb|CBI16834.3| unnamed protein product [Vitis vinifera] 64 6e-08 ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2... 59 2e-06 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 99.4 bits (246), Expect = 1e-18 Identities = 57/129 (44%), Positives = 69/129 (53%) Frame = +3 Query: 600 MAEEQLDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 779 MAEEQLDYEDEEYGG+QKM + GGAIS NDVNVGEGFLQ+ R Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60 Query: 780 SEXXXXXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERL 959 SE FQ KT VP + E +Q + + GV+ +GKY+ F E+KE Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGP 118 Query: 960 TVEGGPQKG 986 GP+ G Sbjct: 119 MAVKGPEMG 127 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 79.7 bits (195), Expect = 1e-12 Identities = 52/129 (40%), Positives = 69/129 (53%) Frame = +3 Query: 600 MAEEQLDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 779 MA+EQ+DYEDEEYGG+QK+QY GAI NDVN+GE FLQ+ R Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAI-PALAEEEMGEDDEYDDLYNDVNIGENFLQMHR 59 Query: 780 SEXXXXXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERL 959 SE FQ P+ S + R E+ +Q +++ GVA + KY+ G FPEQ + Sbjct: 60 SEAPPAPPSVGNGGFQ-PRNS-NDLRVESGGSQGLNIPGVAVESKYS-TGTHFPEQNVK- 115 Query: 960 TVEGGPQKG 986 GP+ G Sbjct: 116 ----GPEIG 120 >emb|CBI16834.3| unnamed protein product [Vitis vinifera] Length = 491 Score = 63.9 bits (154), Expect = 6e-08 Identities = 40/111 (36%), Positives = 51/111 (45%) Frame = +3 Query: 654 MQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQRSEXXXXXXXXXXXXFQTP 833 M + GGAIS NDVNVGEGFLQ+ RSE FQ Sbjct: 1 MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60 Query: 834 KTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERLTVEGGPQKG 986 KT VP + E +Q + + GV+ +GKY+ F E+KE GP+ G Sbjct: 61 KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGPMAVKGPEMG 109 >ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa] Length = 573 Score = 58.9 bits (141), Expect = 2e-06 Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Frame = +3 Query: 615 LDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQRSEXXX 794 +D+E+EE KMQY GAI NDVNVGE FLQ+ SE Sbjct: 1 MDFEEEE-----KMQYQGSGAIPALAEEELGEDDEYDDLY-NDVNVGENFLQMHGSEAPA 54 Query: 795 XXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHG--VATDGKYTKAGLQFPEQKE 953 FQT + E R E +Q ++ G VA +GKY+ AG FPEQK+ Sbjct: 55 PPATAGNGGFQT--RNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ 107