BLASTX nr result

ID: Panax21_contig00008043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008043
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...    99   1e-18
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...    80   1e-12
emb|CBI16834.3| unnamed protein product [Vitis vinifera]               64   6e-08
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-06

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 57/129 (44%), Positives = 69/129 (53%)
 Frame = +3

Query: 600 MAEEQLDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 779
           MAEEQLDYEDEEYGG+QKM +  GGAIS                  NDVNVGEGFLQ+ R
Sbjct: 1   MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 780 SEXXXXXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERL 959
           SE            FQ  KT VP  + E   +Q + + GV+ +GKY+     F E+KE  
Sbjct: 61  SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGP 118

Query: 960 TVEGGPQKG 986
               GP+ G
Sbjct: 119 MAVKGPEMG 127


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 52/129 (40%), Positives = 69/129 (53%)
 Frame = +3

Query: 600 MAEEQLDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQR 779
           MA+EQ+DYEDEEYGG+QK+QY   GAI                   NDVN+GE FLQ+ R
Sbjct: 1   MADEQIDYEDEEYGGAQKLQYQGSGAI-PALAEEEMGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 780 SEXXXXXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERL 959
           SE            FQ P+ S  + R E+  +Q +++ GVA + KY+  G  FPEQ  + 
Sbjct: 60  SEAPPAPPSVGNGGFQ-PRNS-NDLRVESGGSQGLNIPGVAVESKYS-TGTHFPEQNVK- 115

Query: 960 TVEGGPQKG 986
               GP+ G
Sbjct: 116 ----GPEIG 120


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 40/111 (36%), Positives = 51/111 (45%)
 Frame = +3

Query: 654 MQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQRSEXXXXXXXXXXXXFQTP 833
           M +  GGAIS                  NDVNVGEGFLQ+ RSE            FQ  
Sbjct: 1   MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60

Query: 834 KTSVPEPRAENVVTQEISVHGVATDGKYTKAGLQFPEQKERLTVEGGPQKG 986
           KT VP  + E   +Q + + GV+ +GKY+     F E+KE      GP+ G
Sbjct: 61  KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGPMAVKGPEMG 109


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = +3

Query: 615 LDYEDEEYGGSQKMQYHRGGAISXXXXXXXXXXXXXXXXXXNDVNVGEGFLQLQRSEXXX 794
           +D+E+EE     KMQY   GAI                   NDVNVGE FLQ+  SE   
Sbjct: 1   MDFEEEE-----KMQYQGSGAIPALAEEELGEDDEYDDLY-NDVNVGENFLQMHGSEAPA 54

Query: 795 XXXXXXXXXFQTPKTSVPEPRAENVVTQEISVHG--VATDGKYTKAGLQFPEQKE 953
                    FQT   +  E R E   +Q ++  G  VA +GKY+ AG  FPEQK+
Sbjct: 55  PPATAGNGGFQT--RNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ 107


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