BLASTX nr result

ID: Panax21_contig00008042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008042
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   374   e-101
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   341   2e-91
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...   312   7e-83
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...   277   2e-72
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              274   3e-71

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  374 bits (961), Expect = e-101
 Identities = 200/331 (60%), Positives = 234/331 (70%), Gaps = 6/331 (1%)
 Frame = +2

Query: 2   EQLDYEDDGYGGSQKMQYNGGGEISALAEDEITGEEDEYDDLYSDVNVGQGFLQLRRSEA 181
           EQLDYED+ YGG+QKM + GGG ISALA+DE+ GE+DEYDDLY+DVNVG+GFLQ+ RSEA
Sbjct: 4   EQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEA 63

Query: 182 PVPSVGVPNGGFQAQKTSVPEPRTVNVVPEELSIHVVATERTAINDGLRFLEQKEGLTAM 361
           P PS  +  G FQA KT VP  +      + L I  V+ E    N    F E+KEG  A+
Sbjct: 64  PAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGPMAV 121

Query: 362 EGSDMGTLN------ISQKGIAPDMTRDSQALNLGHRGSIPTAHKFEAVPVDMSSKVANE 523
           +G +MG+ +      +SQKG   +MT D+Q  NLG +GS P   K  A P D+  K+ANE
Sbjct: 122 KGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANE 181

Query: 524 SVPLLNPSVGISIGSSQMPSXXXXXXXXXXXXXXXXXXDDNQIRPPVENGATMLFVGELH 703
           S P+LN   G      QM S                  ++NQIRP V+NGATMLFVGELH
Sbjct: 182 STPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMV----NENQIRPAVDNGATMLFVGELH 237

Query: 704 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSAAAAACKEGMNGHFFNG 883
           WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD++AAAACKEGMNG+ FNG
Sbjct: 238 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNG 297

Query: 884 RACVVAFASPQTIKQMGASYTNKSQVQPQSQ 976
           RACVVAFASPQT+KQMGASY NK+Q Q QSQ
Sbjct: 298 RACVVAFASPQTLKQMGASYMNKTQAQSQSQ 328


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  341 bits (874), Expect = 2e-91
 Identities = 185/335 (55%), Positives = 235/335 (70%), Gaps = 6/335 (1%)
 Frame = +2

Query: 2   EQLDYEDDGYGGSQKMQYNGGGEISALAEDEITGEEDEYDDLYSDVNVGQGFLQLRRSEA 181
           EQ+DYED+ YGG+QK+QY G G I ALAE+E+ GE+DEYDDLY+DVN+G+ FLQ+ RSEA
Sbjct: 4   EQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHRSEA 62

Query: 182 PVPSVGVPNGGFQAQKTSVPEPRTVNVVPEELSIHVVATERTAINDGLRFLEQKEGLTAM 361
           P     V NGGFQ + ++  + R  +   + L+I  VA E +  + G  F EQ      +
Sbjct: 63  PPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVE-SKYSTGTHFPEQN-----V 114

Query: 362 EGSDMGTL------NISQKGIAPDMTRDSQALNLGHRGSIPTAHKFEAVPVDMSSKVANE 523
           +G ++G++      +I+QK    +MT DSQA N+G +GS          P DM++K++N+
Sbjct: 115 KGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISND 174

Query: 524 SVPLLNPSVGISIGSSQMPSXXXXXXXXXXXXXXXXXXDDNQIRPPVENGATMLFVGELH 703
             P+  P+ G+     Q+P+                  ++NQIRPP+ENG+TML+VGELH
Sbjct: 175 PTPV--PNAGVPRVIPQLPASQMNMNMDTNRSAT----NENQIRPPLENGSTMLYVGELH 228

Query: 704 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSAAAAACKEGMNGHFFNG 883
           WWTTDAELE+VLSQYG VKEIKFFDERASGKSKGYCQVEFYD+AAAAACKEGMNGH FNG
Sbjct: 229 WWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNG 288

Query: 884 RACVVAFASPQTIKQMGASYTNKSQVQPQSQPQGR 988
           RACVVAFAS QT+KQMGASY NK+Q QPQSQ QGR
Sbjct: 289 RACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGR 323


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  312 bits (800), Expect = 7e-83
 Identities = 173/330 (52%), Positives = 211/330 (63%), Gaps = 3/330 (0%)
 Frame = +2

Query: 8   LDYEDDGYGGSQKMQYNGGGEISALAEDEITGEEDEYDDLYSDVNVGQGFLQLRRSEAPV 187
           +DYE++     +KMQY G G I ALAE+E+ GE+DEYDDLY+DVNVG+ FLQ+  SEAP 
Sbjct: 1   MDYEEE-----EKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54

Query: 188 PSVGVPNGGFQAQKTSVPEPRTVNVVPEELSIHVVATERTAINDGLRFLEQKEGLTAMEG 367
           P   V NGGFQ +        T       ++    A E    N    F EQK+   A+E 
Sbjct: 55  PPATVGNGGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEA 114

Query: 368 SDMGTLN---ISQKGIAPDMTRDSQALNLGHRGSIPTAHKFEAVPVDMSSKVANESVPLL 538
            D+G ++   ++QKG   +M+ D Q  N+G + S P        P DMS K A E  PL 
Sbjct: 115 QDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLP 174

Query: 539 NPSVGISIGSSQMPSXXXXXXXXXXXXXXXXXXDDNQIRPPVENGATMLFVGELHWWTTD 718
                   G+ QM                    ++NQ+RPP+ENG+T L+VGELHWWTTD
Sbjct: 175 ITGSAGPRGAPQMQ----VNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTD 230

Query: 719 AELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSAAAAACKEGMNGHFFNGRACVV 898
           AELES  SQ+GRVKEIKFFDERASGKSKGYCQV+FY++AAAAACKEGMNGH FNGR CVV
Sbjct: 231 AELESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVV 290

Query: 899 AFASPQTIKQMGASYTNKSQVQPQSQPQGR 988
           AFASPQT+KQMGASY NK+Q QPQ+Q QGR
Sbjct: 291 AFASPQTLKQMGASYMNKTQGQPQTQSQGR 320


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  277 bits (709), Expect = 2e-72
 Identities = 160/327 (48%), Positives = 199/327 (60%)
 Frame = +2

Query: 8   LDYEDDGYGGSQKMQYNGGGEISALAEDEITGEEDEYDDLYSDVNVGQGFLQLRRSEAPV 187
           +D+E++     +KMQY G G I ALAE+E+ GE+DEYDDLY+DVNVG+ FLQ+  SEAP 
Sbjct: 1   MDFEEE-----EKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54

Query: 188 PSVGVPNGGFQAQKTSVPEPRTVNVVPEELSIHVVATERTAINDGLRFLEQKEGLTAMEG 367
           P     NGGFQ +        T        S   VA E    N G  F EQK+    +E 
Sbjct: 55  PPATAGNGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEA 114

Query: 368 SDMGTLNISQKGIAPDMTRDSQALNLGHRGSIPTAHKFEAVPVDMSSKVANESVPLLNPS 547
           +D+G++         D +  +Q  + G RG +P       + V+  +  A+ + P++N  
Sbjct: 115 NDVGSIGYG------DGSSVAQKGSAGPRG-VPQ------MQVNQMNMNADVNRPVVN-- 159

Query: 548 VGISIGSSQMPSXXXXXXXXXXXXXXXXXXDDNQIRPPVENGATMLFVGELHWWTTDAEL 727
                                          +NQ+RPP+ENG T L+VGELHWWTTDAEL
Sbjct: 160 -------------------------------ENQVRPPIENGPTTLYVGELHWWTTDAEL 188

Query: 728 ESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSAAAAACKEGMNGHFFNGRACVVAFA 907
           ESV SQYGRVKEIKFFDERASGKSKGYCQV+FY++AAAAACKEGMN H FNGR CVVAFA
Sbjct: 189 ESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFA 248

Query: 908 SPQTIKQMGASYTNKSQVQPQSQPQGR 988
           S QT+KQMGASY +K+Q QPQ Q QGR
Sbjct: 249 SAQTLKQMGASYMSKTQGQPQPQSQGR 275


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  274 bits (700), Expect = 3e-71
 Identities = 155/280 (55%), Positives = 185/280 (66%), Gaps = 8/280 (2%)
 Frame = +2

Query: 47  MQYNGGGEISALAEDEITGEEDEYDDLYSDVNVGQGFLQLRRSEAPVPSVGVPNGGFQAQ 226
           M + GGG ISALA+DE+ GE+DEYDDLY+DVNVG+GFLQ+ RSEAP PS  +  G FQA 
Sbjct: 1   MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60

Query: 227 KTSVPEPRTVNVVPEELSIHVVATERTAINDGLRFLEQKEGLTAMEGSDMGTLN------ 388
           KT VP  +      + L I  V+ E    N    F E+KEG  A++G +MG+ +      
Sbjct: 61  KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKKEGPMAVKGPEMGSTSHLDGPS 118

Query: 389 ISQKGIAPDMTRDSQALNLGHRGSIPTAHKFEAVPVDMSSKVANESVPLLNPSVGISIGS 568
           +SQKG   +MT D+Q  NLG +GS P   K  A P D+  K+ANES P+LN   G     
Sbjct: 119 VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAV 178

Query: 569 SQMPSXXXXXXXXXXXXXXXXXXDDNQIRPPVENGATMLFVGELHWWTTDAELESVLSQY 748
            QM S                  ++NQIRP V+NGATMLFVGELHWWTTDAELESVLSQY
Sbjct: 179 PQMLSNQMGMNVNVNRPMV----NENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQY 234

Query: 749 GRVKEIKFFDERASGKSKGYCQVEFYDSAAAAAC--KEGM 862
           GRVKEIKFFDERASGKSKGYCQVEFYD++AAAA   KEG+
Sbjct: 235 GRVKEIKFFDERASGKSKGYCQVEFYDASAAAAFSGKEGI 274


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