BLASTX nr result

ID: Panax21_contig00008036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008036
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318704.1| global transcription factor group [Populus t...   112   3e-23
ref|XP_002511228.1| bromodomain-containing protein, putative [Ri...   109   2e-22
ref|XP_002322229.1| global transcription factor group [Populus t...   109   3e-22
emb|CBI15622.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   105   5e-21

>ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
           gi|222859377|gb|EEE96924.1| global transcription factor
           group [Populus trichocarpa]
          Length = 613

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/74 (72%), Positives = 65/74 (87%)
 Frame = +1

Query: 13  ENDSLNDLNQVELNSQSKPVSVETDGHQEGESAPPERQVSPEKLYRAALLRSRFADTILK 192
           +N S++ L QVEL+++ KPV+ E DGHQEGESAPPERQVSPEKLYRAALLR+RFADTILK
Sbjct: 387 KNKSVDGLAQVELDTEGKPVAAEADGHQEGESAPPERQVSPEKLYRAALLRNRFADTILK 446

Query: 193 AQERTLGKGEMQDP 234
           A+E+ L KGE +DP
Sbjct: 447 AREKALEKGEKRDP 460


>ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223550343|gb|EEF51830.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 759

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/78 (66%), Positives = 66/78 (84%)
 Frame = +1

Query: 1   DPGIENDSLNDLNQVELNSQSKPVSVETDGHQEGESAPPERQVSPEKLYRAALLRSRFAD 180
           D  I  +S N L ++E NSQ +P++VETDGHQEGE+APP+RQVSP+KLYRAA+LR+RFAD
Sbjct: 539 DNAIVLESANGLAKIESNSQGEPLNVETDGHQEGENAPPDRQVSPDKLYRAAILRNRFAD 598

Query: 181 TILKAQERTLGKGEMQDP 234
           TILKA+E+ L KGE +DP
Sbjct: 599 TILKAREKALEKGEKRDP 616


>ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
           gi|222869225|gb|EEF06356.1| global transcription factor
           group [Populus trichocarpa]
          Length = 709

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   DPGIENDSLNDLNQVELNSQSKPVSVETDGHQEGESAPPERQVSPEKLYRAALLRSRFAD 180
           D  + N S++ L+QVEL+++ KPV+ E DGHQEGESAP +RQVSPEKLYRAALLR+RFAD
Sbjct: 489 DSDVGNQSVDGLDQVELDTEGKPVAAEVDGHQEGESAPSKRQVSPEKLYRAALLRNRFAD 548

Query: 181 TILKAQERTLGKGEMQDP 234
           TILKA+E+ L KGE  DP
Sbjct: 549 TILKAREKALEKGEKCDP 566


>emb|CBI15622.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = +1

Query: 10  IENDSLNDLNQVELNSQSKPVSVETDGHQEGESAPPERQVSPEKLYRAALLRSRFADTIL 189
           I N++LN    V+ N +SKP+S E DGHQEGESAP ERQVSPEKLYRAALLRSRFADTIL
Sbjct: 478 IGNEALNIPCNVDPNLESKPISAEADGHQEGESAPSERQVSPEKLYRAALLRSRFADTIL 537

Query: 190 KAQERTLGKGEMQDP 234
           KA+E+TL KGE  DP
Sbjct: 538 KAREKTLEKGEKGDP 552


>ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
           [Vitis vinifera]
          Length = 770

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/72 (73%), Positives = 60/72 (83%)
 Frame = +1

Query: 19  DSLNDLNQVELNSQSKPVSVETDGHQEGESAPPERQVSPEKLYRAALLRSRFADTILKAQ 198
           ++LN    V+ N +SKP+S E DGHQEGESAP ERQVSPEKLYRAALLRSRFADTILKA+
Sbjct: 551 EALNIPCNVDPNLESKPISAEADGHQEGESAPSERQVSPEKLYRAALLRSRFADTILKAR 610

Query: 199 ERTLGKGEMQDP 234
           E+TL KGE  DP
Sbjct: 611 EKTLEKGEKGDP 622


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