BLASTX nr result

ID: Panax21_contig00008035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008035
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518419.1| NSFL1 cofactor p47, putative [Ricinus commun...   481   e-133
ref|XP_002317152.1| predicted protein [Populus trichocarpa] gi|2...   481   e-133
gb|ABK96017.1| unknown [Populus trichocarpa]                          469   e-130
ref|XP_002272066.1| PREDICTED: UBA and UBX domain-containing pro...   469   e-130
ref|XP_002331560.1| predicted protein [Populus trichocarpa] gi|2...   462   e-128

>ref|XP_002518419.1| NSFL1 cofactor p47, putative [Ricinus communis]
            gi|223542264|gb|EEF43806.1| NSFL1 cofactor p47, putative
            [Ricinus communis]
          Length = 305

 Score =  481 bits (1239), Expect = e-133
 Identities = 243/306 (79%), Positives = 269/306 (87%), Gaps = 4/306 (1%)
 Frame = +1

Query: 130  MSSRDKKPSKPSTSRTGGIRTLSDLNRPTGPDSDSDSDVPQEYYTGGEKSGMLVQDPTKG 309
            M+S+DKKPSK S+SR GGIRTLSDLNR TGPDSDSD D PQEYYTGGEKSGMLVQDP+KG
Sbjct: 1    MASKDKKPSKSSSSRAGGIRTLSDLNRHTGPDSDSDDDAPQEYYTGGEKSGMLVQDPSKG 60

Query: 310  N--DIDAIFNQARQLGAVEGPMEIXXXXXXXXXXXGTGRLLSGDTVPSAPQQPEAVVHNI 483
            N  D+DAIFNQARQLGAVEGP++            GTGRLLSG+T+PSAPQQPEAV+HNI
Sbjct: 61   NGNDVDAIFNQARQLGAVEGPLDPLRPSSSSRSFTGTGRLLSGETIPSAPQQPEAVIHNI 120

Query: 484  VFWRNGFSVNDGPLRRLDDPENAPFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPE 663
            VFW NGF+VNDGPLRRLDDPENAPFLESIRKSECPKEL PADRRSSVHVNLIRR+E CPE
Sbjct: 121  VFWTNGFTVNDGPLRRLDDPENAPFLESIRKSECPKELAPADRRSSVHVNLIRREEQCPE 180

Query: 664  P-KERQVAFQGVGRTLGSSTPPSGAAEP-SDATPVNAAPTPSVGLVVDQSLPSTSIQLRL 837
            P K+R V FQGVGRTLGSS   + A+EP +++TPVN APT S+G+VVD+SLPSTSIQLRL
Sbjct: 181  PEKQRHVPFQGVGRTLGSSC--TAASEPTANSTPVNTAPTSSMGVVVDESLPSTSIQLRL 238

Query: 838  ADGTRMVSHFNYHHTVGDIRAFIDASRPGGSRNYQLQTVGFPPKQLTDLTQTIEQAGLAN 1017
            ADGTRM++HFNYHHTV DIRAFIDASRPGG++NYQLQ +GFPPK L D TQTIEQAGLAN
Sbjct: 239  ADGTRMIAHFNYHHTVNDIRAFIDASRPGGAQNYQLQLMGFPPKLLGDPTQTIEQAGLAN 298

Query: 1018 SVVIQK 1035
            SVVIQK
Sbjct: 299  SVVIQK 304


>ref|XP_002317152.1| predicted protein [Populus trichocarpa] gi|222860217|gb|EEE97764.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  481 bits (1237), Expect = e-133
 Identities = 241/304 (79%), Positives = 264/304 (86%), Gaps = 2/304 (0%)
 Frame = +1

Query: 130  MSSRDKKPSKPSTSRTGGIRTLSDLNRPTGPDSDSDS-DVPQEYYTGGEKSGMLVQDPTK 306
            M+SRDKKP+KPS+SR GGIRTLSDLNR +GPDSDSD  D PQEYYTGGEKSGMLVQDPTK
Sbjct: 1    MASRDKKPAKPSSSRAGGIRTLSDLNRRSGPDSDSDDEDAPQEYYTGGEKSGMLVQDPTK 60

Query: 307  GNDIDAIFNQARQLGAVEGPMEIXXXXXXXXXXXGTGRLLSGDTVPSAPQQPEAVVHNIV 486
            GND+DAIFNQARQLGAVEGP+E            GTGRLLSG+TVPSAPQQPEAVVHNIV
Sbjct: 61   GNDVDAIFNQARQLGAVEGPLENINQSSSSSSFSGTGRLLSGETVPSAPQQPEAVVHNIV 120

Query: 487  FWRNGFSVNDGPLRRLDDPENAPFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPEP 666
            FW NGF+VNDGPLR LDDPENA FLESIRKSECPKELEPADRRSSVHVNLIRRD+ CPEP
Sbjct: 121  FWTNGFTVNDGPLRSLDDPENASFLESIRKSECPKELEPADRRSSVHVNLIRRDQKCPEP 180

Query: 667  -KERQVAFQGVGRTLGSSTPPSGAAEPSDATPVNAAPTPSVGLVVDQSLPSTSIQLRLAD 843
             ++R VAFQGVGRTLGSS+        +D+ P+N+APTP +GLVVD++LPSTSIQLRLAD
Sbjct: 181  ERQRHVAFQGVGRTLGSSSTALATEPTADSAPLNSAPTPFMGLVVDETLPSTSIQLRLAD 240

Query: 844  GTRMVSHFNYHHTVGDIRAFIDASRPGGSRNYQLQTVGFPPKQLTDLTQTIEQAGLANSV 1023
            GTRMV+HFN HHTV DIR+FIDASRPG + NYQLQ +GFPPK LTD TQTIEQAGLANSV
Sbjct: 241  GTRMVAHFNNHHTVNDIRSFIDASRPGAALNYQLQLMGFPPKLLTDPTQTIEQAGLANSV 300

Query: 1024 VIQK 1035
            VIQK
Sbjct: 301  VIQK 304


>gb|ABK96017.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  469 bits (1208), Expect = e-130
 Identities = 234/304 (76%), Positives = 265/304 (87%), Gaps = 2/304 (0%)
 Frame = +1

Query: 130  MSSRDKKPSKPSTSRTGGIRTLSDLNRPTGPDSDSDS-DVPQEYYTGGEKSGMLVQDPTK 306
            M+SR+KKP+KPS+SR GGIRTLSDLNR +G DSDSD  D PQEYYTGGEKSGMLVQDPTK
Sbjct: 1    MASRNKKPAKPSSSRAGGIRTLSDLNRRSGLDSDSDDEDAPQEYYTGGEKSGMLVQDPTK 60

Query: 307  GNDIDAIFNQARQLGAVEGPMEIXXXXXXXXXXXGTGRLLSGDTVPSAPQQPEAVVHNIV 486
            GND+DAIFNQARQLGAVEGP+E            GTGRLLSG+TVPSAPQQPEAVVHNIV
Sbjct: 61   GNDVDAIFNQARQLGAVEGPLENLNQSSSSRSFTGTGRLLSGETVPSAPQQPEAVVHNIV 120

Query: 487  FWRNGFSVNDGPLRRLDDPENAPFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPEP 666
            FW NGF+V+DGPLRRLDDPENA FLESIRKSECPKELEP+DRRSSVHVNLIRRD+ CPEP
Sbjct: 121  FWTNGFTVDDGPLRRLDDPENASFLESIRKSECPKELEPSDRRSSVHVNLIRRDQKCPEP 180

Query: 667  -KERQVAFQGVGRTLGSSTPPSGAAEPSDATPVNAAPTPSVGLVVDQSLPSTSIQLRLAD 843
             K+R  AFQG+GRTLGSS+    +  P+D+ P+++AP P +GLVVD++LPSTSIQLRLAD
Sbjct: 181  EKQRHAAFQGIGRTLGSSSASPASEPPADSAPLSSAPAPLMGLVVDETLPSTSIQLRLAD 240

Query: 844  GTRMVSHFNYHHTVGDIRAFIDASRPGGSRNYQLQTVGFPPKQLTDLTQTIEQAGLANSV 1023
            GTRMV+HFN  +TV DIR+FIDASRPGG+RNYQLQ +GFPPK LT+ TQTIEQAGL+NSV
Sbjct: 241  GTRMVAHFNNSNTVNDIRSFIDASRPGGARNYQLQLMGFPPKLLTEPTQTIEQAGLSNSV 300

Query: 1024 VIQK 1035
            VIQK
Sbjct: 301  VIQK 304


>ref|XP_002272066.1| PREDICTED: UBA and UBX domain-containing protein At4g15410 [Vitis
            vinifera] gi|147798327|emb|CAN74529.1| hypothetical
            protein VITISV_031346 [Vitis vinifera]
            gi|297741768|emb|CBI32997.3| unnamed protein product
            [Vitis vinifera]
          Length = 299

 Score =  469 bits (1207), Expect = e-130
 Identities = 238/305 (78%), Positives = 262/305 (85%), Gaps = 3/305 (0%)
 Frame = +1

Query: 130  MSSRDKKPSKPSTSRTGGIRTLSDLNRPTGPDSDSDSDVPQEYYTGGEKSGMLVQDPTKG 309
            M+SRDKK SKPS+SR  GIRTLSDLNRPT PDSDSDSD PQEYYTGGEKSGMLVQDP+KG
Sbjct: 1    MASRDKKSSKPSSSR--GIRTLSDLNRPTAPDSDSDSDGPQEYYTGGEKSGMLVQDPSKG 58

Query: 310  NDIDAIFNQARQLGAVEGPMEIXXXXXXXXXXXGTGRLLSGDTVPSAPQQPEAVVHNIVF 489
            ND+DAIFNQARQLGAVEGPM             GTGRLLSG+ VP+APQQPE V+HNIVF
Sbjct: 59   NDVDAIFNQARQLGAVEGPM--INPSSSSRSFTGTGRLLSGELVPTAPQQPETVIHNIVF 116

Query: 490  WRNGFSVNDGPLRRLDDPENAPFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPEPK 669
            W NGF+VNDGPLRRLDDPENA FLESIRKSECPKELEPADRRSSVHVNLIRRDENCPE +
Sbjct: 117  WSNGFTVNDGPLRRLDDPENASFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPESE 176

Query: 670  ERQVAFQGVGRTLGSSTPPSGAAEPSDA---TPVNAAPTPSVGLVVDQSLPSTSIQLRLA 840
            + +V FQGVGRTLGSS   S A EP      TP+N AP+P++GL+VD++LPSTSIQLRL+
Sbjct: 177  KTRVPFQGVGRTLGSS---SAAPEPEPTVAPTPLNTAPSPNMGLIVDEALPSTSIQLRLS 233

Query: 841  DGTRMVSHFNYHHTVGDIRAFIDASRPGGSRNYQLQTVGFPPKQLTDLTQTIEQAGLANS 1020
            DGTRM++HFNYHHT+ DIRAFI+ASRPGGS NYQLQ +GFPPKQL D  QTIEQAGLANS
Sbjct: 234  DGTRMIAHFNYHHTITDIRAFIEASRPGGSTNYQLQMMGFPPKQLNDPMQTIEQAGLANS 293

Query: 1021 VVIQK 1035
            VVIQK
Sbjct: 294  VVIQK 298


>ref|XP_002331560.1| predicted protein [Populus trichocarpa] gi|222873784|gb|EEF10915.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  462 bits (1189), Expect = e-128
 Identities = 232/308 (75%), Positives = 263/308 (85%), Gaps = 6/308 (1%)
 Frame = +1

Query: 130  MSSRDKKPSKPSTSRTGGIRTLSDLNRPTGPDSDSDS-DVPQEYYTGGEKSGMLVQDPTK 306
            M+SR+KKP+KPS+SR GGIRTLSDLNR +G DSDSD  D PQEYYTGGEKSGMLVQDPTK
Sbjct: 1    MASRNKKPAKPSSSRAGGIRTLSDLNRRSGLDSDSDDEDAPQEYYTGGEKSGMLVQDPTK 60

Query: 307  GNDIDAIFNQARQLGAVEGPMEIXXXXXXXXXXXGTGRLLSGDTVPSAPQQPEAVVHNIV 486
            GND+DAIFNQARQLGAVEGP+E            GTGRLLSG+TVPSAPQQPEAVVHNIV
Sbjct: 61   GNDVDAIFNQARQLGAVEGPLENLNQSSSSRSFTGTGRLLSGETVPSAPQQPEAVVHNIV 120

Query: 487  FWRNGFSVNDGPLRRLDDPENAPFLE-----SIRKSECPKELEPADRRSSVHVNLIRRDE 651
            FW NGF+V+DGPLRRLDDPENA FLE     SIRKSECPKELEP+DRRSSVHVNLIRRD+
Sbjct: 121  FWTNGFTVDDGPLRRLDDPENASFLEVIAIKSIRKSECPKELEPSDRRSSVHVNLIRRDQ 180

Query: 652  NCPEPKERQVAFQGVGRTLGSSTPPSGAAEPSDATPVNAAPTPSVGLVVDQSLPSTSIQL 831
             CP  K+R  AFQG+GRTLGSS+    +  P+D+ P+++AP P +GLVVD++LPSTSIQL
Sbjct: 181  KCPVKKQRHAAFQGIGRTLGSSSASPASEPPADSAPLSSAPAPLMGLVVDETLPSTSIQL 240

Query: 832  RLADGTRMVSHFNYHHTVGDIRAFIDASRPGGSRNYQLQTVGFPPKQLTDLTQTIEQAGL 1011
            RLADGTRMV+HFN  +TV DIR+FIDASRPGG+RNYQLQ +GFPPK LT+ TQTIEQAGL
Sbjct: 241  RLADGTRMVAHFNNSNTVNDIRSFIDASRPGGARNYQLQLMGFPPKLLTEPTQTIEQAGL 300

Query: 1012 ANSVVIQK 1035
            +NSVVIQK
Sbjct: 301  SNSVVIQK 308


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