BLASTX nr result

ID: Panax21_contig00008034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008034
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...    60   2e-07
emb|CBI20856.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CBI15418.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...    58   7e-07
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   DYLHCLERGRAAGAKLSDFLRKSLQLQVPNDSSKAG 110
           DYLHCLERG+AA  K+S FLR+SLQ Q PNDSS+AG
Sbjct: 210 DYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   DYLHCLERGRAAGAKLSDFLRKSLQLQVPNDSSKAG 110
           DYLHCLERG+AA  K+S FLR+SLQ Q PNDSS+AG
Sbjct: 208 DYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 243


>emb|CBI15418.3| unnamed protein product [Vitis vinifera]
          Length = 134

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   DYLHCLERGRAAGAKLSDFLRKSLQLQVPNDSSKAG 110
           DYLHCLERG+A  AK+S FLR++LQ Q PNDSSKAG
Sbjct: 99  DYLHCLERGQATSAKMSAFLRRNLQWQGPNDSSKAG 134


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   DYLHCLERGRAAGAKLSDFLRKSLQLQVPNDSSKAG 110
           DY+HCLERGRAA  K+S FLR+SLQ Q+P DSSKAG
Sbjct: 208 DYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   DYLHCLERGRAAGAKLSDFLRKSLQLQVPNDSSKA 107
           +YL CLERGRAA  KLSDFLR+SLQ Q+P+DSSKA
Sbjct: 208 EYLKCLERGRAASTKLSDFLRRSLQSQLPSDSSKA 242