BLASTX nr result

ID: Panax21_contig00008021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008021
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   637   0.0  
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   635   e-180
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   635   e-180
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   635   e-180
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   635   e-180

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  637 bits (1644), Expect = 0.0
 Identities = 315/324 (97%), Positives = 320/324 (98%)
 Frame = -3

Query: 973  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQ 794
            QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTSIPEIQ
Sbjct: 821  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQ 880

Query: 793  RINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 614
            RINLG TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA
Sbjct: 881  RINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 940

Query: 613  EFPIDPPLSKMLLASVDLGCSDEILTIIAMITTGNIFYRPREKQAQADQKRAKFFQPEGD 434
            EFP+DPPLSKMLLASVDLGCSDEILTIIAMI TGNIFYRPREKQAQADQKRAKFFQPEGD
Sbjct: 941  EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 1000

Query: 433  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDVVSAGKNFT 254
            HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD+YKLDVVSAGKNFT
Sbjct: 1001 HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFT 1060

Query: 253  KIRKAMTAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 74
            KIRKA+TAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY
Sbjct: 1061 KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1120

Query: 73   MREVTVVDPKWLVELAPRFFKVAD 2
            MREVTV+DPKWLVELAPRFFKVAD
Sbjct: 1121 MREVTVIDPKWLVELAPRFFKVAD 1144


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  635 bits (1639), Expect = e-180
 Identities = 311/324 (95%), Positives = 322/324 (99%)
 Frame = -3

Query: 973  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQ 794
            QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPT+IPEIQ
Sbjct: 841  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQ 900

Query: 793  RINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 614
            RINLG+TTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA
Sbjct: 901  RINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 960

Query: 613  EFPIDPPLSKMLLASVDLGCSDEILTIIAMITTGNIFYRPREKQAQADQKRAKFFQPEGD 434
            EFP+DPPLSKMLLASVDLGCSDEILTIIAMI TGNIFYRPREKQAQADQKRAKFFQPEGD
Sbjct: 961  EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 1020

Query: 433  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDVVSAGKNFT 254
            HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMD+YKLDVVSAGKNFT
Sbjct: 1021 HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFT 1080

Query: 253  KIRKAMTAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 74
            K+RKA+TAGFFFHA+RKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY
Sbjct: 1081 KVRKAITAGFFFHASRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1140

Query: 73   MREVTVVDPKWLVELAPRFFKVAD 2
            MREVTV+DPKWLVELAPR+FKVAD
Sbjct: 1141 MREVTVIDPKWLVELAPRYFKVAD 1164


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  635 bits (1639), Expect = e-180
 Identities = 311/324 (95%), Positives = 322/324 (99%)
 Frame = -3

Query: 973  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQ 794
            QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPT+IPEIQ
Sbjct: 847  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQ 906

Query: 793  RINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 614
            RINLG+TTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA
Sbjct: 907  RINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 966

Query: 613  EFPIDPPLSKMLLASVDLGCSDEILTIIAMITTGNIFYRPREKQAQADQKRAKFFQPEGD 434
            EFP+DPPLSKMLLASVDLGCSDEILTIIAMI TGNIFYRPREKQAQADQKRAKFFQPEGD
Sbjct: 967  EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 1026

Query: 433  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDVVSAGKNFT 254
            HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMD+YKLDVVSAGKNFT
Sbjct: 1027 HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFT 1086

Query: 253  KIRKAMTAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 74
            K+RKA+TAGFFFHA+RKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY
Sbjct: 1087 KVRKAITAGFFFHASRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1146

Query: 73   MREVTVVDPKWLVELAPRFFKVAD 2
            MREVTV+DPKWLVELAPR+FKVAD
Sbjct: 1147 MREVTVIDPKWLVELAPRYFKVAD 1170


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  635 bits (1638), Expect = e-180
 Identities = 312/324 (96%), Positives = 321/324 (99%)
 Frame = -3

Query: 973  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQ 794
            QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTS+PEIQ
Sbjct: 816  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQ 875

Query: 793  RINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 614
            RINLG+TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA
Sbjct: 876  RINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 935

Query: 613  EFPIDPPLSKMLLASVDLGCSDEILTIIAMITTGNIFYRPREKQAQADQKRAKFFQPEGD 434
            EFP++PPLSKMLLASVDLGCSDEILTIIAMI TGNIFYRPREKQAQADQKRAKFFQPEGD
Sbjct: 936  EFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 995

Query: 433  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDVVSAGKNFT 254
            HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMD+YKLDVVSAGKNFT
Sbjct: 996  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFT 1055

Query: 253  KIRKAMTAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 74
            KIRKA+TAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY
Sbjct: 1056 KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1115

Query: 73   MREVTVVDPKWLVELAPRFFKVAD 2
            MREVTV+DPKWLVELAPRFFKVAD
Sbjct: 1116 MREVTVIDPKWLVELAPRFFKVAD 1139


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  635 bits (1638), Expect = e-180
 Identities = 312/324 (96%), Positives = 321/324 (99%)
 Frame = -3

Query: 973  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIPEIQ 794
            QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTS+PEIQ
Sbjct: 819  QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQ 878

Query: 793  RINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 614
            RINLG+TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA
Sbjct: 879  RINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 938

Query: 613  EFPIDPPLSKMLLASVDLGCSDEILTIIAMITTGNIFYRPREKQAQADQKRAKFFQPEGD 434
            EFP++PPLSKMLLASVDLGCSDEILTIIAMI TGNIFYRPREKQAQADQKRAKFFQPEGD
Sbjct: 939  EFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 998

Query: 433  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDVVSAGKNFT 254
            HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMD+YKLDVVSAGKNFT
Sbjct: 999  HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFT 1058

Query: 253  KIRKAMTAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 74
            KIRKA+TAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY
Sbjct: 1059 KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1118

Query: 73   MREVTVVDPKWLVELAPRFFKVAD 2
            MREVTV+DPKWLVELAPRFFKVAD
Sbjct: 1119 MREVTVIDPKWLVELAPRFFKVAD 1142


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