BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008020
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36838.3| unnamed protein product [Vitis vinifera]              194   1e-47
ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-l...   192   4e-47
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l...   191   9e-47
ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putat...   191   2e-46
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   191   2e-46

>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  194 bits (494), Expect = 1e-47
 Identities = 96/128 (75%), Positives = 99/128 (77%)
 Frame = +1

Query: 133 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 312
           KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 46  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 105

Query: 313 YIRGNTIKYLRVPDEVIDKVQEETKNXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGHGT 492
           YIRGNTIKYLRVPDEVIDKVQEETKN                         PAKG+G G 
Sbjct: 106 YIRGNTIKYLRVPDEVIDKVQEETKN-RADRKPPGVGRGRGRGREDGSSGRPAKGIGRGL 164

Query: 493 DDGNAKSV 516
           DDG A+ +
Sbjct: 165 DDGGARGM 172


>ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 150

 Score =  192 bits (489), Expect = 4e-47
 Identities = 95/127 (74%), Positives = 98/127 (77%)
 Frame = +1

Query: 136 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 315
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 316 IRGNTIKYLRVPDEVIDKVQEETKNXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGHGTD 495
           IRGNTIKYLRVPDEVIDKVQEETKN                         PAKG+G G D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKN-RADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLD 119

Query: 496 DGNAKSV 516
           DG A+ +
Sbjct: 120 DGGARGM 126


>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 148

 Score =  191 bits (486), Expect = 9e-47
 Identities = 95/125 (76%), Positives = 97/125 (77%)
 Frame = +1

Query: 136 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 315
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 316 IRGNTIKYLRVPDEVIDKVQEETKNXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGHGTD 495
           IRGNTIKYLRVPDEVIDKVQEETK+                         PAKG+G G D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKS-RADRKPPGVGRGRGRGREDGPGGRPAKGIGRGLD 119

Query: 496 DGNAK 510
           DG AK
Sbjct: 120 DGGAK 124


>ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
           gi|223537623|gb|EEF39246.1| Small nuclear
           ribonucleoprotein SM D3, putative [Ricinus communis]
          Length = 147

 Score =  191 bits (484), Expect = 2e-46
 Identities = 94/126 (74%), Positives = 98/126 (77%)
 Frame = +1

Query: 136 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 315
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 316 IRGNTIKYLRVPDEVIDKVQEETKNXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGHGTD 495
           IRGNTIKYLRVPDEVIDKVQEETK+                         P KG+G G D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKS---RSDRKPPGVGRGRGRGREDGGRPVKGIGRGLD 117

Query: 496 DGNAKS 513
           DG+AK+
Sbjct: 118 DGSAKA 123


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  191 bits (484), Expect = 2e-46
 Identities = 94/126 (74%), Positives = 97/126 (76%)
 Frame = +1

Query: 139  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 318
            LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI
Sbjct: 3656 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 3715

Query: 319  RGNTIKYLRVPDEVIDKVQEETKNXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGHGTDD 498
            RGNTIKYLRVPDEVIDKVQEETKN                         PAKG+G G DD
Sbjct: 3716 RGNTIKYLRVPDEVIDKVQEETKN-RADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLDD 3774

Query: 499  GNAKSV 516
            G A+ +
Sbjct: 3775 GGARGM 3780