BLASTX nr result

ID: Panax21_contig00008010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008010
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400...    59   4e-16
ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400...    56   4e-16
emb|CAN63503.1| hypothetical protein VITISV_011678 [Vitis vinifera]    55   5e-15
ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|2...    54   7e-13
ref|XP_002299602.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-12

>ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400 [Vitis vinifera]
          Length = 114

 Score = 59.3 bits (142), Expect(2) = 4e-16
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +1

Query: 262 DQSKDQRQQAYRTVEITPTIDPPSPKVSAGCGICFGKAKPEKKTHKRKPGHRKS 423
           ++S+    QAY+TV++ P IDPPSP+VS GCG+C    KP K  H+ K G RKS
Sbjct: 62  ERSRSNGGQAYKTVKVAPAIDPPSPRVS-GCGLCGVFGKPVKSHHRPKRGKRKS 114



 Score = 51.6 bits (122), Expect(2) = 4e-16
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +2

Query: 41  MAALPRSEVSFRRSGSSGLVWDDKYLSGELKPVQTKEGED 160
           MA L RSE+SFRR GSSG VWDDK+L+G L   +  + E+
Sbjct: 1   MAGLQRSEISFRRQGSSGSVWDDKFLAGALNQAKQNDQEE 40


>ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400-like [Cucumis sativus]
           gi|449484181|ref|XP_004156808.1| PREDICTED:
           uncharacterized protein At1g15400-like [Cucumis sativus]
          Length = 120

 Score = 56.2 bits (134), Expect(2) = 4e-16
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +2

Query: 41  MAALPRSEVSFRRSGSSGLVWDDKYLSGELKPVQTKEGEDAADN 172
           M  L RS VSFRR GSSGLVWDD++LSGELK   T   +++ +N
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEEN 44



 Score = 54.7 bits (130), Expect(2) = 4e-16
 Identities = 25/54 (46%), Positives = 36/54 (66%)
 Frame = +1

Query: 262 DQSKDQRQQAYRTVEITPTIDPPSPKVSAGCGICFGKAKPEKKTHKRKPGHRKS 423
           ++S+    + YRT +++P I+PPSPKVSA CG C    KP KK+ + K G R+S
Sbjct: 67  ERSRSNGGRGYRTGKVSPAIEPPSPKVSA-CGFCSAFGKPAKKSRRTKTGKRRS 119


>emb|CAN63503.1| hypothetical protein VITISV_011678 [Vitis vinifera]
          Length = 153

 Score = 55.5 bits (132), Expect(2) = 5e-15
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +1

Query: 262 DQSKDQRQQAYRTVEITPTIDPPSPKVSAGCGICFGKAKPEKKTHKRKPGHRKS*SC 432
           ++S+    QAY+TV++ P IDPPSP+VS GCG+C    KP K  H+ K G     +C
Sbjct: 62  ERSRSNGGQAYKTVKVAPAIDPPSPRVS-GCGLCGVFGKPVKSHHRPKRGFTDDQNC 117



 Score = 51.6 bits (122), Expect(2) = 5e-15
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +2

Query: 41  MAALPRSEVSFRRSGSSGLVWDDKYLSGELKPVQTKEGED 160
           MA L RSE+SFRR GSSG VWDDK+L+G L   +  + E+
Sbjct: 1   MAGLQRSEISFRRQGSSGSVWDDKFLAGALNQAKQNDQEE 40


>ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|222841580|gb|EEE79127.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 53.9 bits (128), Expect(2) = 7e-13
 Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +2

Query: 41  MAALPRSEVSFRRSGSSGLVWDDKYLSGELKPV-QTKEGEDAADNH 175
           MA L RS +SFRR GSSGLVWDDK +SGEL  V Q +E E+    H
Sbjct: 1   MAGLQRSAMSFRRQGSSGLVWDDKLISGELNKVNQKQEHEEQEPQH 46



 Score = 45.8 bits (107), Expect(2) = 7e-13
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +1

Query: 283 QQAYRTVEITPTIDPPSPKVSAGCGICFGKAKPEKKTHKR 402
           Q+ YRT  ++P I+PPSPKVSA CG C    KP K   K+
Sbjct: 81  QRGYRTGRVSPAIEPPSPKVSA-CGFCGAFGKPAKNRRKK 119


>ref|XP_002299602.1| predicted protein [Populus trichocarpa] gi|222846860|gb|EEE84407.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 57.0 bits (136), Expect(2) = 2e-12
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +2

Query: 41  MAALPRSEVSFRRSGSSGLVWDDKYLSGELKPVQTKE 151
           MA L RS+VSFRR GSSGL+WDD+Y+SGEL  V  K+
Sbjct: 1   MAGLQRSDVSFRRQGSSGLIWDDRYISGELNQVNQKQ 37



 Score = 41.6 bits (96), Expect(2) = 2e-12
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 247 PNKDHDQSKDQR-QQAYRTVEITPTIDPPSPKVSAGCGICFGKAKPEKKTHKR 402
           PN   ++S+    Q+ YRT  ++P I+PPSPKV   CG C    KP K   K+
Sbjct: 67  PNITIERSRSNGGQRGYRTGRVSPAIEPPSPKVFT-CGFCGAFGKPGKNHRKK 118


Top