BLASTX nr result
ID: Panax21_contig00008009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008009
(5696 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 1625 0.0
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 1589 0.0
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia... 1589 0.0
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab... 1587 0.0
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha... 1576 0.0
>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 1625 bits (4207), Expect = 0.0
Identities = 943/1869 (50%), Positives = 1203/1869 (64%), Gaps = 82/1869 (4%)
Frame = +2
Query: 23 IDYNLYGMGHLHVSKIKFRLPVPDVISCRKARDSRQHRQQ--TDNTNCLTADFLADSSGN 196
+DYNLYGMG LH+ K+KFR PVPD + R + DN NC+ +D AD+S
Sbjct: 180 VDYNLYGMGLLHLVKLKFRHPVPDAPGKKLDEIFRYMHENHAMDNPNCMPSDPQADTSNE 239
Query: 197 ACLDSPIWISSTIPDGWIWQQPSQLDLPTDPDIHIITRQSTCQLEGDASVDEIINQQFLS 376
A SP+WISS IP W+W+ P+ +D D I+ RQS C+LEGD +V++I+NQ
Sbjct: 240 AASTSPVWISSKIPADWMWKFPTAMDTLDDNGINFCKRQSVCELEGDVTVEDILNQHSKL 299
Query: 377 YSSLSQTGSDVKMVQSLVPIWEEEFERTGMHGASLLSEPGKPLPKDVLRTLSHGLEFMDN 556
Y+S SQ SDVKMVQSLV IWEE + RTG+ A L +PGKPL K+VL T S G+++ +
Sbjct: 300 YTSFSQNHSDVKMVQSLVSIWEE-YRRTGVQEAPLPPDPGKPLAKEVLETFSPGMDY-EK 357
Query: 557 FFMELHTDSSTRS-----RNEMMFSLSTRSSTDTHNVDEFGHTYSENKRELLKFSKEINE 721
EL+ + S + S SS N+ G + E F K + E
Sbjct: 358 KLTELYERPKSPSVLTPLEKDQRLVQSLTSSVKEANITRVGCSEGE-------FLKHVEE 410
Query: 722 IGV----LLSRDTPDIVDKHEEAIDACTEQLSADELQVLGT-VGPSDV------------ 850
G L + + DK + +LS DE+Q G S V
Sbjct: 411 TGRTNSDLFFASSFEDYDKMLTEGENVVPRLSMDEVQATPKGCGVSSVFRSNSHNLRRID 470
Query: 851 ----------------KAADQEALMLLKWLASSQAAEDINSDDELARDTILSPLLPATTM 982
A D+EAL LL+WLA+SQAA+DINSDDEL +TIL PLLPA M
Sbjct: 471 KLLLVLTVFFLHYIQRGAVDEEALGLLRWLATSQAAQDINSDDELLCETILGPLLPAANM 530
Query: 983 EKVLEKANMDYESQSQQECRDILDCVENSIDFEGLKGN--VSQSINHCQKSSKKTIPQVD 1156
++VLE+A+ DY S+SQ+EC+DILD VE+ FEG + + + SS++TIPQ+D
Sbjct: 531 DQVLERASQDYGSESQKECQDILDSVEDLDGFEGFNKTKCCTDDEHFFRSSSEETIPQLD 590
Query: 1157 DSSDDQMLIPC-ATKST-EIEMNSESEKSLQTNVQ-HDFGSSSTKHKRKRVLQSSLPFSL 1327
++DD +T++T + ++N E+E+S + + HD S S K+++ SLPF
Sbjct: 591 GAADDMFSSSGGSTENTPDRDLNVENERSSKLAILLHDIDSGSCSRKKEKSFWGSLPFHE 650
Query: 1328 NEKVNDAIQPKSSNLTGRSNNEHKDGIVTGFGGGNETNQCCSVAMGDADKDLGCSEEAST 1507
EKVN + +S G + KD G + Q V + +AD S E
Sbjct: 651 AEKVNTDSRCVNSCRPGIYTSSTKDSEFVSCFSGEDGGQV-DVTLQNADTSTYNSREGHL 709
Query: 1508 TFGSSMRDLMRRKRCYRVEPPECETPHSKVPFKDWKKDSSLCTKGGDNSQDKKPPKCRSP 1687
S+RDLMRRKR YR EP +C + D ++ + ++ D+ +
Sbjct: 710 FVERSVRDLMRRKRNYRSEPLDCGYGKANNFTVDSRQKKVVLSRDLDSEVLRSNEPSLRY 769
Query: 1688 LSNEQTEICERYMFEAKSESEEACDVKPDNSICSKYGKLPLVS-CN--TRSFPTSVSDYR 1858
+ C + K+ + KP S S YGKLPLV C+ ++ +V +
Sbjct: 770 RDSSHLMPC---LTNPKAIVNVFYENKPGYSNSSMYGKLPLVDVCDGLEQASSPNVGEIP 826
Query: 1859 SSHSFEGINDLVVTAANVRSGNRFHGPFSMHGQIKKIPKLLNSETEN---QNSAAQIGCC 2029
S + G + + + GP S+ G K NS N +S + C
Sbjct: 827 GSETVSGPSQVCFDPCLSEAETIGVGPVSLDGCEILASKKSNSGACNADAHDSTPSMQCA 886
Query: 2030 E---------------NTNCEDCVLGSDSLIS-------MVANTEVNSMELIGMGFYKKP 2143
+ N N D D+++ MV N + + IG+ +KP
Sbjct: 887 DKDYFSPSTKRRLLLGNQNSNDRKQKDDAVLPALSQSMPMVTNFDGEQILSIGLTTCRKP 946
Query: 2144 PVQHWTNGISGNAPVSS--AILNYPCPTDQKYEATSVQNKLLDDCLPFFVRDCIEGQEFQ 2317
P + P +S + +++ ++ + + LDD LPFF+ +
Sbjct: 947 P----NADLMHKEPFASTSSTMSWKRALLKQKDVEGETGRALDDLLPFFLD--------R 994
Query: 2318 DVRSIAEDFNHQ-QEGIMGVPTYFHNDGSYLYMLTPAISPPSTDGVKRWLLQ-DGTGSSG 2491
D I E+ + +E MGVP ++ NDGS++Y+LTP SPPS + V++WL G
Sbjct: 995 DKNDIFEEHGYSSKEAAMGVPIHYRNDGSFMYILTPVNSPPSKNSVRQWLTSGQGDEPLK 1054
Query: 2492 NLMD-SQSSQADACSEPLMESGSKP--DEDSXXXXXXXXXXGSHNAEL-QPFYNDATKIL 2659
+L++ S ++ + L++ +KP S G N+ + + + + +
Sbjct: 1055 DLLNISFAALGINLGKTLVDDRNKPLPQPASSSHTNIVIHGGLPNSSADETSFPENLEPV 1114
Query: 2660 QTDGNILNMKQNTGCSEDFSQISGPDGRPKLTPISQIGFRDPASVGGGQQLTVLSIEVQT 2839
++ G + ++ S+D SQISGPD K TP+SQIGFRDPASVGG QQLT+LS+EVQ
Sbjct: 1115 KSGGVTVEVRACASLSQDISQISGPDEISKATPLSQIGFRDPASVGGIQQLTLLSVEVQA 1174
Query: 2840 ASRGDFRPDPRLDAINFIILVIHEDDDLVIDTYCLLRSDTGHVQRNLDGIAGCKVLVLSE 3019
RGD RPDP+ DA+ I L I D V + +L + +RN GI G K+LV E
Sbjct: 1175 ECRGDLRPDPQFDAVKMIALTIQTDSGPVFEVVLILCTKIDSSKRNRYGI-GYKLLVHHE 1233
Query: 3020 EQHLFNHFIKIICSFDPDILMGWDIQSGSLGFLAERAAHLGIGLLNKISRTPSQTNVLGR 3199
E+ LF F+KII DPDIL+GWDIQ SLG+LAERA+ LGI LLNKISRTP + +L
Sbjct: 1234 EKCLFQSFMKIIYLTDPDILIGWDIQGSSLGYLAERASQLGINLLNKISRTPDEAKMLDG 1293
Query: 3200 DSDVPAKGIISDALPESAVADSVVLEDAIIEDEWGRTHASGVHVSGRIVLNVWRLVRSEV 3379
DS + I + + E DS V+ED IIEDEWGRTHASG+H+ GRIVLN+WRL+R+EV
Sbjct: 1294 DSKTHTE-IPENLVSELVDFDSTVVEDMIIEDEWGRTHASGIHIGGRIVLNLWRLMRNEV 1352
Query: 3380 KLNMYSAEAVAEEVLRRKIPFIPCKVLTRWFSSGPGRAKYRCIEYVMERAKLNLQIITQL 3559
KLN+Y+ EAVAE VLRRK+P+I +VLT+WF+SGP +A++RCIEY+MERAKLNLQ+I+QL
Sbjct: 1353 KLNIYTLEAVAEAVLRRKLPYIHHRVLTQWFNSGPRQARFRCIEYMMERAKLNLQLISQL 1412
Query: 3560 DMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMEC 3739
DMINRTSELARVFGI+FFSVLSRGSQYRVESMLLRLAH+QNYLA++PG+ QVASQPAMEC
Sbjct: 1413 DMINRTSELARVFGIEFFSVLSRGSQYRVESMLLRLAHSQNYLAVSPGNLQVASQPAMEC 1472
Query: 3740 LPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFSTCLGKVKPSKSDTLGVSSYSPDS 3919
LPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCF TCLGKV PSK +TLGV SYSP+
Sbjct: 1473 LPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKVNTLGVISYSPEQ 1532
Query: 3920 NVLLDLKHEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLVPSQQVLKRI 4099
VL +LK +IL TPNGVMYV KVRKG+LPRLLEEIL TRIMVKQ MKKL PSQ+VL+R+
Sbjct: 1533 QVLNELKDQILFTPNGVMYVTPKVRKGILPRLLEEILLTRIMVKQEMKKLAPSQKVLQRV 1592
Query: 4100 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLETAISFVNAHDKWKAK 4279
FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLE+AISFVN+ +KWKAK
Sbjct: 1593 FNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLESAISFVNSQEKWKAK 1652
Query: 4280 VLYGDTDSMFVLLRGRSVKEALKIGQDIASTVTAMNPSPVTLKLEKVYHPCFLLTKKRYV 4459
V+YGDTDSMFVLL+GR+VK+A IGQ+IAS ++AMNP+PVTLK+EKVY PCFLLTKKRYV
Sbjct: 1653 VIYGDTDSMFVLLKGRTVKQAFGIGQEIASAISAMNPNPVTLKMEKVYSPCFLLTKKRYV 1712
Query: 4460 GYSYESPNQVDPIFDAKGIETVRRDTCAALSKTMEQSLRLYFEHEDINKVKLYLLRQWKR 4639
GYS+ESP Q++P FDAKGIETVRRDTCAA++KTMEQSLRL+FEH+DI+++K YL RQWKR
Sbjct: 1713 GYSFESPEQIEPTFDAKGIETVRRDTCAAVAKTMEQSLRLFFEHQDISEIKTYLQRQWKR 1772
Query: 4640 ILSGRVSLQDFVFAKEVRLGTYSTRA-SSLPPAAIVAIKAMRTDPRAEPRYAERIPYVVV 4816
ILSGRVS+QDFVFAKEVRLGTY +R S+LPPAAIVA KAMR DPRAEPRYAERIPYVV+
Sbjct: 1773 ILSGRVSIQDFVFAKEVRLGTYRSRGPSALPPAAIVATKAMRIDPRAEPRYAERIPYVVI 1832
Query: 4817 HGEPGARXXXXXXXXXXXXEIDSPFRLNDLYYINKQIIPALQRVFGLVGADLNRWFQDMP 4996
+ EPGAR +DSP+RLN LYYINKQIIPALQR FGLVGA+LN+WF +MP
Sbjct: 1833 YREPGARLADMVVDPMDLLAVDSPYRLNSLYYINKQIIPALQRAFGLVGANLNQWFLEMP 1892
Query: 4997 RPGQKVFNKRQYNALNPHRTRIDYYYLSKHCILCGELVQASAYLCSKCSENEAIVATAVV 5176
RP ++VF K+ +A NP+RTRIDYYYLSKHCILCGELVQ S+ LC++C +NEA T ++
Sbjct: 1893 RPVREVFFKQPVSAANPNRTRIDYYYLSKHCILCGELVQTSSNLCNQCLQNEAASTTTII 1952
Query: 5177 GRTSKLEREIQHLADICRHCGGGDWIIESGVKCTSLACSIFYERKKLQKELLSLSAVATE 5356
RTSKLE E+QHLA IC+HCGG D I+E GVKCTSLACS+FYER K QKEL L AVA
Sbjct: 1953 RRTSKLESEMQHLAAICQHCGGADGIVEFGVKCTSLACSVFYERLKAQKELRGLVAVAAH 2012
Query: 5357 ANFYPRCMV 5383
+ YP+ ++
Sbjct: 2013 KDLYPKLIL 2021
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 1589 bits (4115), Expect = 0.0
Identities = 918/1820 (50%), Positives = 1156/1820 (63%), Gaps = 30/1820 (1%)
Frame = +2
Query: 23 IDYNLYGMGHLHVSKIKFRLPVPDVISCRKARDSRQHRQQTDNTNCLTADFLADSSGNAC 202
+DYNLYGMGH+H+SK+KFR PVP R+ Q+ D A A+SS A
Sbjct: 182 VDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEV----AITKANSSAAAS 237
Query: 203 LDSPIWISSTIPDGWIWQQPSQLDLPTDPDIHI----ITRQSTCQLEGDASVDEIINQQF 370
+ P+W STIP W+W + D P H RQS C+LEGDA+ +I+NQQF
Sbjct: 238 VSFPVWSLSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILNQQF 297
Query: 371 LSYSSLSQTGSDVKMVQSLVPIWEEEFERTGMHGASLLSEPGKPLPKDVLRTLSHGLEFM 550
Y+SLSQ SD MVQSLV IWEEE+ERTG+H A + +PGKP DVL+T+S + F
Sbjct: 298 KMYNSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGF- 356
Query: 551 DNFFMELHTDSSTRSRNEMMFSLSTRSSTDTHNVDEFGHTYSENKR----ELLKFSKEIN 718
N E+ + S M + + + D H E + N S++++
Sbjct: 357 GNMLKEM-LNKVELSPPGMKPTAVSSAGPDMHAKPEITDLQALNHMVGTCSEFPASEQLS 415
Query: 719 EIGVLLSRDTPDIVDKHEEAIDACTEQLSADELQVLGTVGPSDVKAADQEALMLLKWLAS 898
+G +K EEA + DE T + + D EAL L KW AS
Sbjct: 416 PLG-----------EKSEEA------SMENDEYMKTPTDRDTPAQIQDAEALGLFKWFAS 458
Query: 899 SQAAEDINSDDELARDTILSPLLPATTMEKVLEKANMDYESQSQQECRDILDCVENSIDF 1078
SQAAEDINSDDE+ R+TILSPLLP ++ KVLE A+ DY SQSQ+EC+DILD EN DF
Sbjct: 459 SQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQENLPDF 518
Query: 1079 EGLKGNVSQSINHCQK---SSKKTIPQVDDSSDDQMLIPCATKSTEIEMNS-----ESEK 1234
S Q SS K +++ +SD +P ++ S NS +S+
Sbjct: 519 GSSTKRALPSNPDSQNLRTSSDKQSLEIEVASD----VPDSSTSNGASENSFRRYRKSDL 574
Query: 1235 SLQTNVQHDFGSSSTKHKRKRVLQSSLPFSLNEKVN-DAIQPKSSNLTGRSNNEHKDGIV 1411
+++ S S +K + LPF+L + + D +S+ G + +
Sbjct: 575 HTSEVMEYKNRSFSKSNKPSNSVWGPLPFTLTKNLQKDFDSTNASDKLGLTK-------I 627
Query: 1412 TGFGGGNETNQCCSVAMGDADKDLGCSEEASTTFGSSMRDLMRRKRCYRVEPPECETPHS 1591
+ + NE V + + D+ + + + G S+RDLMR+KR E P
Sbjct: 628 SSYPM-NEMTDNYIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKRLCHGESPV------ 680
Query: 1592 KVPFKDWKKDSSLCTKGGDNSQDKKPPKCRSPLSNEQTEICERYMFEAKSESEEACDVKP 1771
SQ K K R E+ E R EAK + A +
Sbjct: 681 --------------------SQHMKSRKVRDSRHGEKNECTLRC--EAKKQGP-ALSAEF 717
Query: 1772 DNSICSKYGKL-PLVSCNTRSFPTSVSDYRSSHSFEGINDLVVTAAN----VRSGNRFHG 1936
+C L P+ S N ++ S HS + + + N +R+ +
Sbjct: 718 SEFVCGDTPNLSPIDSGNCECNISTESS--ELHSVDRCSAKETASQNSDEVLRNLSSTTV 775
Query: 1937 PFSMHGQIKKIPKLLNSETENQNSAAQIGCCENTNCEDCVLGSDSLISMVANTEVNSMEL 2116
PF Q + L++S N + +I + + E AN + L
Sbjct: 776 PFGKDPQTVESGTLVSS---NIHVGIEIDSVQKSGREQ---------ESTANETDETGRL 823
Query: 2117 IGMGFYKKPP-VQHWTNGISGNAPVSSAILNYPCPTDQKYEATSVQNKLLDDCLPFFVRD 2293
I + KKPP + + G+ +A S ++ +YE S + +PFF
Sbjct: 824 ICLTLSKKPPSLDCLSAGLQDSA--HSHEIHAREKQHDEYEGNS-------NDIPFF--- 871
Query: 2294 CIEGQEFQDVRSIAEDFNHQQEGI-MGVPTYFHNDGSYLYMLTPAISPPSTDGVKRWLLQ 2470
+ E+ H +G +G+P + NDGS LY+LTPA SPPS D V +W+
Sbjct: 872 --------PLEDNKEEKKHFFQGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISN 923
Query: 2471 DGTGSSGN-----LMDSQSSQADACSEPLMESGSKPDEDSXXXXXXXXXXGSHNAELQPF 2635
D S+ + L D+ + + + ++ S + NA
Sbjct: 924 DKGDSNIDSEKQPLRDNHNDRGASFTDLASASNVVSVSEHVEQHNNLFVNSESNA----- 978
Query: 2636 YNDATKILQTDGNILNMKQNTGCSEDFSQISGPDGRPKLTPISQIGFRDPASVGGGQQLT 2815
Y ++ L+ G LN+ S++ SQISGPDG+ TP+SQ+GFRDPAS+G GQQLT
Sbjct: 979 YTESEIDLKPKGTFLNLNLQASVSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLT 1038
Query: 2816 VLSIEVQTASRGDFRPDPRLDAINFIILVIHEDDDLVIDTYCLLRSDTGHVQRNLDGIAG 2995
+LSIEV SRGD RPDPR D++N I LV+ DD V + + LL S QRN+DG++G
Sbjct: 1039 ILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSG 1098
Query: 2996 CKVLVLSEEQHLFNHFIKIICSFDPDILMGWDIQSGSLGFLAERAAHLGIGLLNKISRTP 3175
CK+ V EE+ LF +FI+ +C +DPD+L+GWDIQ GS+GFLAERAA LGI LN ISRTP
Sbjct: 1099 CKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTP 1158
Query: 3176 SQTNVLGRDSDVPAKGIISDALPESAVADSVVLEDAIIEDEWGRTHASGVHVSGRIVLNV 3355
S T D+ + + ++ LP+ VA+ +E+ +IEDEWGRTHASGVHV GRIVLN
Sbjct: 1159 SPTTTNNSDNK---RKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNA 1215
Query: 3356 WRLVRSEVKLNMYSAEAVAEEVLRRKIPFIPCKVLTRWFSSGPGRAKYRCIEYVMERAKL 3535
WRL+R EVKLNMY+ EAV+E VLR+K+P IP KVLT WFSSGP A+YRCIEYV+ RA L
Sbjct: 1216 WRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANL 1275
Query: 3536 NLQIITQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQV 3715
NL+I++QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI+PG+QQV
Sbjct: 1276 NLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQV 1335
Query: 3716 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFSTCLGKVKPSKSDTLG 3895
ASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPSMIIAYNLCFSTCLGK+ K +TLG
Sbjct: 1336 ASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLG 1395
Query: 3896 VSSYSPDSNVLLDLKHEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLVP 4075
VSSYS D +VL DL ++IL TPN VMYVP +VR+G+LPRLLEEILSTRIMVK+AMKKL P
Sbjct: 1396 VSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTP 1454
Query: 4076 SQQVLKRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLETAISFVN 4255
S+ VL RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AISFVN
Sbjct: 1455 SEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1514
Query: 4256 AHDKWKAKVLYGDTDSMFVLLRGRSVKEALKIGQDIASTVTAMNPSPVTLKLEKVYHPCF 4435
A+D W A+V+YGDTDSMFVLL+GR+VKEA +GQ+IAS +T MNP PVTLK+EKVYHPCF
Sbjct: 1515 ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNPHPVTLKMEKVYHPCF 1574
Query: 4436 LLTKKRYVGYSYESPNQVDPIFDAKGIETVRRDTCAALSKTMEQSLRLYFEHEDINKVKL 4615
LLTKKRYVGYSYESPNQ +PIFDAKGIETVRRDTC A++KTMEQSLRL+FE ++I+KVK
Sbjct: 1575 LLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQSLRLFFEQKNISKVKS 1634
Query: 4616 YLLRQWKRILSGRVSLQDFVFAKEVRLGTYSTRASS-LPPAAIVAIKAMRTDPRAEPRYA 4792
YL RQWKRILSGRVSLQDF+FAKEVRLGTYSTR SS LPPAAIVA K+M+ DPR EPRYA
Sbjct: 1635 YLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAIVATKSMKADPRTEPRYA 1694
Query: 4793 ERIPYVVVHGEPGARXXXXXXXXXXXXEIDSPFRLNDLYYINKQIIPALQRVFGLVGADL 4972
ER+PYVV+HGEPGAR ++D+P+RLNDLYYINKQIIPALQRVFGLVGADL
Sbjct: 1695 ERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQIIPALQRVFGLVGADL 1754
Query: 4973 NRWFQDMPRPGQKVFNKRQYNALNPHRTRIDYYYLSKHCILCGELVQASAYLCSKCSENE 5152
N+WF +MPR + +R N+ N H+TRIDY+YLSKHCILCGE+VQ SA LC++C +N+
Sbjct: 1755 NQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGEVVQESAQLCNRCLQNK 1814
Query: 5153 AIVATAVVGRTSKLEREIQHLADICRHCGGGDWIIESGVKCTSLACSIFYERKKLQKELL 5332
+ A +V +TSKLERE+QHLA ICRHCGGGDW+++SGVKC SLACS+FYER+K+QKEL
Sbjct: 1815 SAAAATIVWKTSKLEREMQHLATICRHCGGGDWVVQSGVKCNSLACSVFYERRKVQKELR 1874
Query: 5333 SLSAVATEANFYPRCMVEWF 5392
LS++ATE+ YP+CM EWF
Sbjct: 1875 GLSSIATESELYPKCMAEWF 1894
>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of
polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1890
Score = 1589 bits (4115), Expect = 0.0
Identities = 918/1820 (50%), Positives = 1156/1820 (63%), Gaps = 30/1820 (1%)
Frame = +2
Query: 23 IDYNLYGMGHLHVSKIKFRLPVPDVISCRKARDSRQHRQQTDNTNCLTADFLADSSGNAC 202
+DYNLYGMGH+H+SK+KFR PVP R+ Q+ D A A+SS A
Sbjct: 178 VDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEV----AITKANSSAAAS 233
Query: 203 LDSPIWISSTIPDGWIWQQPSQLDLPTDPDIHI----ITRQSTCQLEGDASVDEIINQQF 370
+ P+W STIP W+W + D P H RQS C+LEGDA+ +I+NQQF
Sbjct: 234 VSFPVWSLSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILNQQF 293
Query: 371 LSYSSLSQTGSDVKMVQSLVPIWEEEFERTGMHGASLLSEPGKPLPKDVLRTLSHGLEFM 550
Y+SLSQ SD MVQSLV IWEEE+ERTG+H A + +PGKP DVL+T+S + F
Sbjct: 294 KMYNSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGF- 352
Query: 551 DNFFMELHTDSSTRSRNEMMFSLSTRSSTDTHNVDEFGHTYSENKR----ELLKFSKEIN 718
N E+ + S M + + + D H E + N S++++
Sbjct: 353 GNMLKEM-LNKVELSPPGMKPTAVSSAGPDMHAKPEITDLQALNHMVGTCSEFPASEQLS 411
Query: 719 EIGVLLSRDTPDIVDKHEEAIDACTEQLSADELQVLGTVGPSDVKAADQEALMLLKWLAS 898
+G +K EEA + DE T + + D EAL L KW AS
Sbjct: 412 PLG-----------EKSEEA------SMENDEYMKTPTDRDTPAQIQDAEALGLFKWFAS 454
Query: 899 SQAAEDINSDDELARDTILSPLLPATTMEKVLEKANMDYESQSQQECRDILDCVENSIDF 1078
SQAAEDINSDDE+ R+TILSPLLP ++ KVLE A+ DY SQSQ+EC+DILD EN DF
Sbjct: 455 SQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQENLPDF 514
Query: 1079 EGLKGNVSQSINHCQK---SSKKTIPQVDDSSDDQMLIPCATKSTEIEMNS-----ESEK 1234
S Q SS K +++ +SD +P ++ S NS +S+
Sbjct: 515 GSSTKRALPSNPDSQNLRTSSDKQSLEIEVASD----VPDSSTSNGASENSFRRYRKSDL 570
Query: 1235 SLQTNVQHDFGSSSTKHKRKRVLQSSLPFSLNEKVN-DAIQPKSSNLTGRSNNEHKDGIV 1411
+++ S S +K + LPF+L + + D +S+ G + +
Sbjct: 571 HTSEVMEYKNRSFSKSNKPSNSVWGPLPFTLTKNLQKDFDSTNASDKLGLTK-------I 623
Query: 1412 TGFGGGNETNQCCSVAMGDADKDLGCSEEASTTFGSSMRDLMRRKRCYRVEPPECETPHS 1591
+ + NE V + + D+ + + + G S+RDLMR+KR E P
Sbjct: 624 SSYPM-NEMTDNYIVPVKEHQADVCNTIDRNVLAGCSLRDLMRKKRLCHGESPV------ 676
Query: 1592 KVPFKDWKKDSSLCTKGGDNSQDKKPPKCRSPLSNEQTEICERYMFEAKSESEEACDVKP 1771
SQ K K R E+ E R EAK + A +
Sbjct: 677 --------------------SQHMKSRKVRDSRHGEKNECTLRC--EAKKQGP-ALSAEF 713
Query: 1772 DNSICSKYGKL-PLVSCNTRSFPTSVSDYRSSHSFEGINDLVVTAAN----VRSGNRFHG 1936
+C L P+ S N ++ S HS + + + N +R+ +
Sbjct: 714 SEFVCGDTPNLSPIDSGNCECNISTESS--ELHSVDRCSAKETASQNSDEVLRNLSSTTV 771
Query: 1937 PFSMHGQIKKIPKLLNSETENQNSAAQIGCCENTNCEDCVLGSDSLISMVANTEVNSMEL 2116
PF Q + L++S N + +I + + E AN + L
Sbjct: 772 PFGKDPQTVESGTLVSS---NIHVGIEIDSVQKSGREQ---------ESTANETDETGRL 819
Query: 2117 IGMGFYKKPP-VQHWTNGISGNAPVSSAILNYPCPTDQKYEATSVQNKLLDDCLPFFVRD 2293
I + KKPP + + G+ +A S ++ +YE S + +PFF
Sbjct: 820 ICLTLSKKPPSLDCLSAGLQDSA--HSHEIHAREKQHDEYEGNS-------NDIPFF--- 867
Query: 2294 CIEGQEFQDVRSIAEDFNHQQEGI-MGVPTYFHNDGSYLYMLTPAISPPSTDGVKRWLLQ 2470
+ E+ H +G +G+P + NDGS LY+LTPA SPPS D V +W+
Sbjct: 868 --------PLEDNKEEKKHFFQGTSLGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQWISN 919
Query: 2471 DGTGSSGN-----LMDSQSSQADACSEPLMESGSKPDEDSXXXXXXXXXXGSHNAELQPF 2635
D S+ + L D+ + + + ++ S + NA
Sbjct: 920 DKGDSNIDSEKQPLRDNHNDRGASFTDLASASNVVSVSEHVEQHNNLFVNSESNA----- 974
Query: 2636 YNDATKILQTDGNILNMKQNTGCSEDFSQISGPDGRPKLTPISQIGFRDPASVGGGQQLT 2815
Y ++ L+ G LN+ S++ SQISGPDG+ TP+SQ+GFRDPAS+G GQQLT
Sbjct: 975 YTESEIDLKPKGTFLNLNLQASVSQELSQISGPDGKSGPTPLSQMGFRDPASMGAGQQLT 1034
Query: 2816 VLSIEVQTASRGDFRPDPRLDAINFIILVIHEDDDLVIDTYCLLRSDTGHVQRNLDGIAG 2995
+LSIEV SRGD RPDPR D++N I LV+ DD V + + LL S QRN+DG++G
Sbjct: 1035 ILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLFSPDSIDQRNVDGLSG 1094
Query: 2996 CKVLVLSEEQHLFNHFIKIICSFDPDILMGWDIQSGSLGFLAERAAHLGIGLLNKISRTP 3175
CK+ V EE+ LF +FI+ +C +DPD+L+GWDIQ GS+GFLAERAA LGI LN ISRTP
Sbjct: 1095 CKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTP 1154
Query: 3176 SQTNVLGRDSDVPAKGIISDALPESAVADSVVLEDAIIEDEWGRTHASGVHVSGRIVLNV 3355
S T D+ + + ++ LP+ VA+ +E+ +IEDEWGRTHASGVHV GRIVLN
Sbjct: 1155 SPTTTNNSDNK---RKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNA 1211
Query: 3356 WRLVRSEVKLNMYSAEAVAEEVLRRKIPFIPCKVLTRWFSSGPGRAKYRCIEYVMERAKL 3535
WRL+R EVKLNMY+ EAV+E VLR+K+P IP KVLT WFSSGP A+YRCIEYV+ RA L
Sbjct: 1212 WRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANL 1271
Query: 3536 NLQIITQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQV 3715
NL+I++QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAI+PG+QQV
Sbjct: 1272 NLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQV 1331
Query: 3716 ASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFSTCLGKVKPSKSDTLG 3895
ASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPSMIIAYNLCFSTCLGK+ K +TLG
Sbjct: 1332 ASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLG 1391
Query: 3896 VSSYSPDSNVLLDLKHEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLVP 4075
VSSYS D +VL DL ++IL TPN VMYVP +VR+G+LPRLLEEILSTRIMVK+AMKKL P
Sbjct: 1392 VSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTP 1450
Query: 4076 SQQVLKRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRTLETAISFVN 4255
S+ VL RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AISFVN
Sbjct: 1451 SEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVN 1510
Query: 4256 AHDKWKAKVLYGDTDSMFVLLRGRSVKEALKIGQDIASTVTAMNPSPVTLKLEKVYHPCF 4435
A+D W A+V+YGDTDSMFVLL+GR+VKEA +GQ+IAS +T MNP PVTLK+EKVYHPCF
Sbjct: 1511 ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNPHPVTLKMEKVYHPCF 1570
Query: 4436 LLTKKRYVGYSYESPNQVDPIFDAKGIETVRRDTCAALSKTMEQSLRLYFEHEDINKVKL 4615
LLTKKRYVGYSYESPNQ +PIFDAKGIETVRRDTC A++KTMEQSLRL+FE ++I+KVK
Sbjct: 1571 LLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQSLRLFFEQKNISKVKS 1630
Query: 4616 YLLRQWKRILSGRVSLQDFVFAKEVRLGTYSTRASS-LPPAAIVAIKAMRTDPRAEPRYA 4792
YL RQWKRILSGRVSLQDF+FAKEVRLGTYSTR SS LPPAAIVA K+M+ DPR EPRYA
Sbjct: 1631 YLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAIVATKSMKADPRTEPRYA 1690
Query: 4793 ERIPYVVVHGEPGARXXXXXXXXXXXXEIDSPFRLNDLYYINKQIIPALQRVFGLVGADL 4972
ER+PYVV+HGEPGAR ++D+P+RLNDLYYINKQIIPALQRVFGLVGADL
Sbjct: 1691 ERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQIIPALQRVFGLVGADL 1750
Query: 4973 NRWFQDMPRPGQKVFNKRQYNALNPHRTRIDYYYLSKHCILCGELVQASAYLCSKCSENE 5152
N+WF +MPR + +R N+ N H+TRIDY+YLSKHCILCGE+VQ SA LC++C +N+
Sbjct: 1751 NQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGEVVQESAQLCNRCLQNK 1810
Query: 5153 AIVATAVVGRTSKLEREIQHLADICRHCGGGDWIIESGVKCTSLACSIFYERKKLQKELL 5332
+ A +V +TSKLERE+QHLA ICRHCGGGDW+++SGVKC SLACS+FYER+K+QKEL
Sbjct: 1811 SAAAATIVWKTSKLEREMQHLATICRHCGGGDWVVQSGVKCNSLACSVFYERRKVQKELR 1870
Query: 5333 SLSAVATEANFYPRCMVEWF 5392
LS++ATE+ YP+CM EWF
Sbjct: 1871 GLSSIATESELYPKCMAEWF 1890
>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
Length = 1899
Score = 1587 bits (4110), Expect = 0.0
Identities = 920/1829 (50%), Positives = 1158/1829 (63%), Gaps = 39/1829 (2%)
Frame = +2
Query: 23 IDYNLYGMGHLHVSKIKFRLPVPDVISCRKARDSRQHRQQTDNTNCLTADFLADSSGNAC 202
+DYNLYGM H+H+SK+KFR PVP R+ Q+ D A A+SS A
Sbjct: 182 VDYNLYGMCHVHISKMKFRSPVPHHFLPRRFDLEDCAGQRIDEV----AITKANSSAAAS 237
Query: 203 LDSPIWISSTIPDGWIWQQPSQLDLPTDPDIH--IITRQSTCQLEGDASVDEIINQQFLS 376
+ PIW STIP W+W + D P H RQS C+LEGDA++ +I+NQQF
Sbjct: 238 VSFPIWSLSTIPGQWMWNISEESDTPLSQSQHRHYYRRQSLCELEGDATITDILNQQFKM 297
Query: 377 YSSLSQTGSDVKMVQSLVPIWEEEFERTGMHGASLLSEPGKPLPKDVLRTLSHGLEFMDN 556
Y+SLSQ SD MVQSLV IWEEE+ERTG+H A + +PGKP DVL+T+S + F +N
Sbjct: 298 YNSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLKTMSDYVGF-EN 356
Query: 557 FFMELHTDSSTRSRNEMMFSLSTRSSTDTHNVDEFGHTYSENKR----ELLKFSKEINEI 724
E+H + S+++M + + + D H E N S++++ +
Sbjct: 357 MLKEMHNEVDL-SQSDMKPTAVSSAGPDRHAKPEISDLQVLNHMVGTSSKFPASEQLSPL 415
Query: 725 GVLLSRDTPDIVDKHEEAIDACTEQLSADELQVLGTVGPSDVKAADQEALMLLKWLASSQ 904
G +++ EA + DE + + D EAL L KW ASSQ
Sbjct: 416 G-----------ERNGEA------SMENDEYMKTPMDRDTPAEIQDAEALGLFKWFASSQ 458
Query: 905 AAEDINSDDELARDTILSPLLPATTMEKVLEKANMDYESQSQQECRDILDCVENSIDFEG 1084
AAEDINSDDE+ R+TILSPLLP ++ KVLE A+ DY SQSQ+EC+DILD E+ DF
Sbjct: 459 AAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQKECQDILDSQEDLPDFGS 518
Query: 1085 LKGNVSQSINHCQKSSKKTIPQVDDS------SDDQML-------IPCATKSTEIEMNSE 1225
S+K+ +P DS SD Q L +P + S NS
Sbjct: 519 --------------STKRALPSNPDSQNLITSSDKQSLETEVASDVPDISTSNGASENSF 564
Query: 1226 SEKSLQTNVQHDFGSSSTKHKRKRVLQSSLPFSLNEKV-NDAIQPKSSNLTG--RSNNEH 1396
+++ S S +K + L F+L + + ND +S+ G + N++H
Sbjct: 565 QRYRKSEVMENKNRSYSKSNKPSNSVWGPLLFTLTKNLQNDFDSTNTSDKLGLTKINSDH 624
Query: 1397 KDGIVTGFGGGNETNQCCSVAMGDADKDLGCSEEASTTFGSSMRDLMRRKRCYRVEPPEC 1576
NET +V + + D+ S + + G S+RDLMR+KR
Sbjct: 625 PM---------NETTDKYNVPVKEHQADVCNSIDKNVLAGCSLRDLMRKKRLC------- 668
Query: 1577 ETPHSKVPFKDWKKDSSLCTKGGDNSQ-DKKPPKCRSPLSNE----QTEICERYMFEAKS 1741
H P K + + D+ +KK RS + E E +A S
Sbjct: 669 ---HGDSPVSQHMKFRKVLPQSRDSPHGEKKQCTLRSEAEKQGPALSAEFSEVDYGDAPS 725
Query: 1742 ESEEACDVKPDNSICSKYGKLPLVS-CNTRSFPTSVSDYRSSHSFEGINDLVVTAANVRS 1918
D + +I ++ +L V C+ + SD E + + T +
Sbjct: 726 TLSPIDDGTCECNISTQMTELHSVGRCSAKETAFQNSD-------EVVRNFSFTTVS--- 775
Query: 1919 GNRFHGPFSMHGQIKKIPKLLNSET---ENQNSAAQIGCCENTNCEDCVLGSDSLISMVA 2089
+ K P+ + S T N+ +I + + E A
Sbjct: 776 -------------LGKDPQTVESGTLVSSNKLLGIEIDDVQKSGREQ---------ESTA 813
Query: 2090 NTEVNSMELIGMGFYKKPP-VQHWTNGISGNAPVSSAILNYPCPTDQKYEATSVQNKLLD 2266
N V + LI + KKPP V ++G+ + + + +++++ +K
Sbjct: 814 NEIVETGRLICLTLSKKPPSVDCLSSGLHDSGHSHDILAQFHHAREKQHDGCEGNSK--- 870
Query: 2267 DCLPFFVRDCIEGQEFQDVRSIAEDFNHQQEGI-MGVPTYFHNDGSYLYMLTPAISPPST 2443
+PFF +D + H +G +G+P + NDGS LY+L PA+SPPS
Sbjct: 871 -DIPFF--------PLEDTGINKDGNKHFFQGASLGIPLHHLNDGSNLYLLAPALSPPSV 921
Query: 2444 DGVKRWLLQDGTGSSGNLMDSQSSQADACSEPLMESGSKPDEDSXXXXXXXXXXGSHNAE 2623
D V +W+ +D + +DS+ + + + S D S H+
Sbjct: 922 DSVLQWIAEDKGDYN---IDSEKQPLE--DDHIDRGASFTDLASASNVVSVSEHVQHHNN 976
Query: 2624 L-----QPFYNDATKILQTDGNILNMKQNTGCSEDFSQISGPDGRPKLTPISQIGFRDPA 2788
+ Y ++ L+ G LN+ N+ S++ SQISGPDG+ TP+SQ+GFRDPA
Sbjct: 977 VFVNSESNTYTESEIDLKRRGTFLNL--NSQISQEMSQISGPDGKSGPTPLSQMGFRDPA 1034
Query: 2789 SVGGGQQLTVLSIEVQTASRGDFRPDPRLDAINFIILVIHEDDDLVIDTYCLLRSDTGHV 2968
S+G GQQLTVLSIEV SRGD RPDPR D++N I LV+ DD V + + LL S
Sbjct: 1035 SMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFVAEVFVLLVSPDSID 1094
Query: 2969 QRNLDGIAGCKVLVLSEEQHLFNHFIKIICSFDPDILMGWDIQSGSLGFLAERAAHLGIG 3148
QRN+DG++GCK V EE+ LF++FI+ +C +DPDIL+GWDIQ GS+GFLAERAA LGI
Sbjct: 1095 QRNVDGLSGCKFSVFLEERQLFSYFIETLCKWDPDILLGWDIQGGSIGFLAERAAQLGIR 1154
Query: 3149 LLNKISRTPSQTNVLGRDSDVPAKGIISDALPESAVADSVVLEDAIIEDEWGRTHASGVH 3328
LN ISRTPS T DSD K + + LP+ VAD +E+ +IEDEWGRTHASGVH
Sbjct: 1155 FLNNISRTPSPTT--RNDSDNKRK-LGKNLLPDPLVADPAQVEEVVIEDEWGRTHASGVH 1211
Query: 3329 VSGRIVLNVWRLVRSEVKLNMYSAEAVAEEVLRRKIPFIPCKVLTRWFSSGPGRAKYRCI 3508
V GRIVLN WRL+R EVKLNMY+ EAV+E VLR+KIP IP KVLT WFSSGP A+YRCI
Sbjct: 1212 VGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKIPSIPYKVLTEWFSSGPAGARYRCI 1271
Query: 3509 EYVMERAKLNLQIITQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 3688
EYV+ R LNL+I++QLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL
Sbjct: 1272 EYVVRRTNLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1331
Query: 3689 AIAPGSQQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFSTCLGKV 3868
AI+PG+QQVASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPSMIIAYNLCFSTCLGK+
Sbjct: 1332 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1391
Query: 3869 KPSKSDTLGVSSYSPDSNVLLDLKHEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMV 4048
K +TLGVSSYS D VL DL ++IL TPN VMYVP +VR+G+LPRLLEEILSTRIMV
Sbjct: 1392 AHLKMNTLGVSSYSLDLGVLQDL-NQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMV 1450
Query: 4049 KQAMKKLVPSQQVLKRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRRT 4228
K+AMKKL PS+ VL RIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGR T
Sbjct: 1451 KKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1510
Query: 4229 LETAISFVNAHDKWKAKVLYGDTDSMFVLLRGRSVKEALKIGQDIASTVTAMNPSPVTLK 4408
LE AISFVNA+D W A+V+YGDTDSMFVLL+GR+VKEA +GQ+IAS +T MNP PVTLK
Sbjct: 1511 LEKAISFVNANDSWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNPHPVTLK 1570
Query: 4409 LEKVYHPCFLLTKKRYVGYSYESPNQVDPIFDAKGIETVRRDTCAALSKTMEQSLRLYFE 4588
+EKVYHPCFLLTKKRYVGYSYESP+Q +PIFDAKGIETVRRDTC A+SKTMEQSLRL+FE
Sbjct: 1571 MEKVYHPCFLLTKKRYVGYSYESPDQNEPIFDAKGIETVRRDTCEAVSKTMEQSLRLFFE 1630
Query: 4589 HEDINKVKLYLLRQWKRILSGRVSLQDFVFAKEVRLGTYSTRASS-LPPAAIVAIKAMRT 4765
+ I+KVK YL RQWKRILSGRVSLQDFVFAKEVRLGTYSTR SS LPPAAIVA K+MRT
Sbjct: 1631 KKSISKVKSYLYRQWKRILSGRVSLQDFVFAKEVRLGTYSTRDSSLLPPAAIVATKSMRT 1690
Query: 4766 DPRAEPRYAERIPYVVVHGEPGARXXXXXXXXXXXXEIDSPFRLNDLYYINKQIIPALQR 4945
DPR EPRYAER+PYVV+HGEPGAR +ID+P+RLNDLYYINKQIIPALQR
Sbjct: 1691 DPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDIDTPYRLNDLYYINKQIIPALQR 1750
Query: 4946 VFGLVGADLNRWFQDMPRPGQKVFNKRQYNALNPHRTRIDYYYLSKHCILCGELVQASAY 5125
VFGL+GADLN+WF +MPR + +R ++ N H+TRIDY+YLSKHCILCGE+VQ SA
Sbjct: 1751 VFGLLGADLNQWFLEMPRLTRSSLGQRPLSSKNSHKTRIDYFYLSKHCILCGEVVQESAQ 1810
Query: 5126 LCSKCSENEAIVATAVVGRTSKLEREIQHLADICRHCGGGDWIIESGVKCTSLACSIFYE 5305
LC++C +N++ +V +TSKLERE+QHLA ICRHCGGGDW+++ GVKC SLACS+FYE
Sbjct: 1811 LCNRCLKNKSAADATIVWKTSKLEREMQHLATICRHCGGGDWVVQCGVKCNSLACSVFYE 1870
Query: 5306 RKKLQKELLSLSAVATEANFYPRCMVEWF 5392
R+K+QKEL LS++ATE+ YP+CM EWF
Sbjct: 1871 RRKVQKELRGLSSIATESELYPKCMAEWF 1899
>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1916
Score = 1576 bits (4081), Expect = 0.0
Identities = 919/1846 (49%), Positives = 1157/1846 (62%), Gaps = 56/1846 (3%)
Frame = +2
Query: 23 IDYNLYGMGHLHVSKIKFRLPVPDVISCRKARDSRQHRQQTDNTNCLTADFLADSSGNAC 202
+DYNLYGMGH+H+SK+KFR PVP R+ Q+ D A A+SS A
Sbjct: 178 VDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEV----AITKANSSAAAS 233
Query: 203 LDSPIWISSTIPDGWIWQQPSQLDLPTDPDIHI----ITRQSTCQLEGDA---------- 340
+ P+W STIP W+W + D P H RQS C+LEGDA
Sbjct: 234 VSFPVWSLSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSGNFPDSK 293
Query: 341 ----------------SVDEIINQQFLSYSSLSQTGSDVKMVQSLVPIWEEEFERTGMHG 472
S+ +I+NQQF Y+SLSQ SD MVQSLV IWEEE+ERTG+H
Sbjct: 294 FNCLCFMYDRTFELASSLVDILNQQFKMYNSLSQAQSDTNMVQSLVAIWEEEYERTGVHD 353
Query: 473 ASLLSEPGKPLPKDVLRTLSHGLEFMDNFFMELHTDSSTRSRNEMMFSLSTRSSTDTHNV 652
A + +PGKP DVL+T+S + F N E+ + S M + + + D H
Sbjct: 354 APIPPDPGKPSAADVLQTMSDYVGF-GNMLKEM-LNKVELSPPGMKPTAVSSAGPDMHAK 411
Query: 653 DEFGHTYSENKR----ELLKFSKEINEIGVLLSRDTPDIVDKHEEAIDACTEQLSADELQ 820
E + N S++++ +G +K EEA + DE
Sbjct: 412 PEITDLQALNHMVGTCSEFPASEQLSPLG-----------EKSEEA------SMENDEYM 454
Query: 821 VLGTVGPSDVKAADQEALMLLKWLASSQAAEDINSDDELARDTILSPLLPATTMEKVLEK 1000
T + + D EAL L KW ASSQAAEDINSDDE+ R+TILSPLLP ++ KVLE
Sbjct: 455 KTPTDRDTPAQIQDAEALGLFKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEM 514
Query: 1001 ANMDYESQSQQECRDILDCVENSIDFEGLKGNVSQSINHCQK---SSKKTIPQVDDSSDD 1171
A+ DY SQSQ+EC+DILD EN DF S Q SS K +++ +SD
Sbjct: 515 ASTDYVSQSQKECQDILDSQENLPDFGSSTKRALPSNPDSQNLRTSSDKQSLEIEVASD- 573
Query: 1172 QMLIPCATKSTEIEMNS-----ESEKSLQTNVQHDFGSSSTKHKRKRVLQSSLPFSLNEK 1336
+P ++ S NS +S+ +++ S S +K + LPF+L +
Sbjct: 574 ---VPDSSTSNGASENSFRRYRKSDLHTSEVMEYKNRSFSKSNKPSNSVWGPLPFTLTKN 630
Query: 1337 VN-DAIQPKSSNLTGRSNNEHKDGIVTGFGGGNETNQCCSVAMGDADKDLGCSEEASTTF 1513
+ D +S+ G + ++ + NE V + + D+ + + +
Sbjct: 631 LQKDFDSTNASDKLGLTK-------ISSYPM-NEMTDNYIVPVKEHQADVCNTIDRNVLA 682
Query: 1514 GSSMRDLMRRKRCYRVEPPECETPHSKVPFKDWKKDSSLCTKGGDNSQDKKPPKCRSPLS 1693
G S+RDLMR+KR E P SQ K K R
Sbjct: 683 GCSLRDLMRKKRLCHGESPV--------------------------SQHMKSRKVRDSRH 716
Query: 1694 NEQTEICERYMFEAKSESEEACDVKPDNSICSKYGKL-PLVSCNTRSFPTSVSDYRSSHS 1870
E+ E R EAK + A + +C L P+ S N ++ S HS
Sbjct: 717 GEKNECTLRC--EAKKQGP-ALSAEFSEFVCGDTPNLSPIDSGNCECNISTESS--ELHS 771
Query: 1871 FEGINDLVVTAAN----VRSGNRFHGPFSMHGQIKKIPKLLNSETENQNSAAQIGCCENT 2038
+ + + N +R+ + PF Q + L++S N + +I + +
Sbjct: 772 VDRCSAKETASQNSDEVLRNLSSTTVPFGKDPQTVESGTLVSS---NIHVGIEIDSVQKS 828
Query: 2039 NCEDCVLGSDSLISMVANTEVNSMELIGMGFYKKPP-VQHWTNGISGNAPVSSAILNYPC 2215
E AN + LI + KKPP + + G+ +A S ++
Sbjct: 829 GREQ---------ESTANETDETGRLICLTLSKKPPSLDCLSAGLQDSA--HSHEIHARE 877
Query: 2216 PTDQKYEATSVQNKLLDDCLPFFVRDCIEGQEFQDVRSIAEDFNHQQEGI-MGVPTYFHN 2392
+YE S + +PFF + E+ H +G +G+P + N
Sbjct: 878 KQHDEYEGNS-------NDIPFF-----------PLEDNKEEKKHFFQGTSLGIPLHHLN 919
Query: 2393 DGSYLYMLTPAISPPSTDGVKRWLLQDGTGSSGN-----LMDSQSSQADACSEPLMESGS 2557
DGS LY+LTPA SPPS D V +W+ D S+ + L D+ + + + ++ S
Sbjct: 920 DGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDRGASFTDLASASNV 979
Query: 2558 KPDEDSXXXXXXXXXXGSHNAELQPFYNDATKILQTDGNILNMKQNTGCSEDFSQISGPD 2737
+ NA Y ++ L+ G LN+ S++ SQISGPD
Sbjct: 980 VSVSEHVEQHNNLFVNSESNA-----YTESEIDLKPKGTFLNLNLQASVSQELSQISGPD 1034
Query: 2738 GRPKLTPISQIGFRDPASVGGGQQLTVLSIEVQTASRGDFRPDPRLDAINFIILVIHEDD 2917
G+ TP+SQ+GFRDPAS+G GQQLT+LSIEV SRGD RPDPR D++N I LV+ DD
Sbjct: 1035 GKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDD 1094
Query: 2918 DLVIDTYCLLRSDTGHVQRNLDGIAGCKVLVLSEEQHLFNHFIKIICSFDPDILMGWDIQ 3097
V + + LL S QRN+DG++GCK+ V EE+ LF +FI+ +C +DPD+L+GWDIQ
Sbjct: 1095 SFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQ 1154
Query: 3098 SGSLGFLAERAAHLGIGLLNKISRTPSQTNVLGRDSDVPAKGIISDALPESAVADSVVLE 3277
GS+GFLAERAA LGI LN ISRTPS T D+ + + ++ LP+ VA+ +E
Sbjct: 1155 GGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNK---RKLGNNLLPDPLVANPAQVE 1211
Query: 3278 DAIIEDEWGRTHASGVHVSGRIVLNVWRLVRSEVKLNMYSAEAVAEEVLRRKIPFIPCKV 3457
+ +IEDEWGRTHASGVHV GRIVLN WRL+R EVKLNMY+ EAV+E VLR+K+P IP KV
Sbjct: 1212 EVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKV 1271
Query: 3458 LTRWFSSGPGRAKYRCIEYVMERAKLNLQIITQLDMINRTSELARVFGIDFFSVLSRGSQ 3637
LT WFSSGP A+YRCIEYV+ RA LNL+I++QLDMINRTSELARVFGIDFFSVLSRGSQ
Sbjct: 1272 LTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQ 1331
Query: 3638 YRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYP 3817
YRVESMLLRLAHTQNYLAI+PG+QQVASQPAMEC+PLVMEPES FY DPV+VLDFQSLYP
Sbjct: 1332 YRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYP 1391
Query: 3818 SMIIAYNLCFSTCLGKVKPSKSDTLGVSSYSPDSNVLLDLKHEILLTPNGVMYVPSKVRK 3997
SMIIAYNLCFSTCLGK+ K +TLGVSSYS D +VL DL ++IL TPN VMYVP +VR+
Sbjct: 1392 SMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRR 1450
Query: 3998 GVLPRLLEEILSTRIMVKQAMKKLVPSQQVLKRIFNARQLALKLIANVTYGYTAAGFSGR 4177
G+LPRLLEEILSTRIMVK+AMKKL PS+ VL RIFNARQLALKLIANVTYGYTAAGFSGR
Sbjct: 1451 GILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGR 1510
Query: 4178 MPCAELADSIVQCGRRTLETAISFVNAHDKWKAKVLYGDTDSMFVLLRGRSVKEALKIGQ 4357
MPCAELADSIVQCGR TLE AISFVNA+D W A+V+YGDTDSMFVLL+GR+VKEA +GQ
Sbjct: 1511 MPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQ 1570
Query: 4358 DIASTVTAMNPSPVTLKLEKVYHPCFLLTKKRYVGYSYESPNQVDPIFDAKGIETVRRDT 4537
+IAS +T MNP PVTLK+EKVYHPCFLLTKKRYVGYSYESPNQ +PIFDAKGIETVRRDT
Sbjct: 1571 EIASAITEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDT 1630
Query: 4538 CAALSKTMEQSLRLYFEHEDINKVKLYLLRQWKRILSGRVSLQDFVFAKEVRLGTYSTRA 4717
C A++KTMEQSLRL+FE ++I+KVK YL RQWKRILSGRVSLQDF+FAKEVRLGTYSTR
Sbjct: 1631 CEAVAKTMEQSLRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRD 1690
Query: 4718 SS-LPPAAIVAIKAMRTDPRAEPRYAERIPYVVVHGEPGARXXXXXXXXXXXXEIDSPFR 4894
SS LPPAAIVA K+M+ DPR EPRYAER+PYVV+HGEPGAR ++D+P+R
Sbjct: 1691 SSLLPPAAIVATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYR 1750
Query: 4895 LNDLYYINKQIIPALQRVFGLVGADLNRWFQDMPRPGQKVFNKRQYNALNPHRTRIDYYY 5074
LNDLYYINKQIIPALQRVFGLVGADLN+WF +MPR + +R N+ N H+TRIDY+Y
Sbjct: 1751 LNDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFY 1810
Query: 5075 LSKHCILCGELVQASAYLCSKCSENEAIVATAVVGRTSKLEREIQHLADICRHCGGGDWI 5254
LSKHCILCGE+VQ SA LC++C +N++ A +V +TSKLERE+QHLA ICRHCGGGDW+
Sbjct: 1811 LSKHCILCGEVVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWV 1870
Query: 5255 IESGVKCTSLACSIFYERKKLQKELLSLSAVATEANFYPRCMVEWF 5392
++SGVKC SLACS+FYER+K+QKEL LS++ATE+ YP+CM EWF
Sbjct: 1871 VQSGVKCNSLACSVFYERRKVQKELRGLSSIATESELYPKCMAEWF 1916