BLASTX nr result

ID: Panax21_contig00008003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008003
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycin...   120   1e-25
ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis ...   120   2e-25
ref|XP_003542932.1| PREDICTED: uncharacterized protein LOC100788...   116   3e-24
ref|XP_002316726.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003593945.1| La-related protein [Medicago truncatula] gi|...   101   7e-20

>ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycine max]
           gi|255636971|gb|ACU18818.1| unknown [Glycine max]
          Length = 405

 Score =  120 bits (302), Expect = 1e-25
 Identities = 57/111 (51%), Positives = 71/111 (63%)
 Frame = +1

Query: 1   GMRVKLLKQMGKHGQRKTARKVSGSENSTSVQTSDPAGEEDNHVSSKHHDDTPGEEDGEH 180
           GMRVKLLK MG +G +K A K S SE ++S   S+  G+E+NH S++H +D   EEDG+H
Sbjct: 277 GMRVKLLKGMGTYGHKKQAWKGSHSEKNSSRHVSEQTGDEENHGSNEHREDAHEEEDGDH 336

Query: 181 LAKEKXXXXXXXXXXXXKQKYSGSNGQGHGTVPSNHVGETSKPPPGPRMPD 333
           L+K+K            K KY   NG GHG+ PS H  E SKPPPGPRMPD
Sbjct: 337 LSKDKGGQRYRNQGRSRKHKYRAGNGMGHGSTPSTHAAEASKPPPGPRMPD 387


>ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
           gi|297740679|emb|CBI30861.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/112 (56%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   GMRVKLL-KQMGKHGQRKTARKVSGSENSTSVQTSDPAGEEDNHVSSKHHDDTPGEEDGE 177
           GMRVKLL KQMGK+GQR+   K S  E ++SV  + PAG+E+N+ SS+ HD+TP EEDGE
Sbjct: 214 GMRVKLLHKQMGKYGQRRKGWKGSDMEKNSSVGPAHPAGDEENN-SSERHDETPDEEDGE 272

Query: 178 HLAKEKXXXXXXXXXXXXKQKYSGSNGQGHGTVPSNHVGETSKPPPGPRMPD 333
           HL KEK             QKY   NGQGHGT+ S++  E SKPPPGP+MPD
Sbjct: 273 HLTKEKNGPRGRNRGRSRGQKYRCMNGQGHGTLSSSYGAEGSKPPPGPKMPD 324


>ref|XP_003542932.1| PREDICTED: uncharacterized protein LOC100788145 [Glycine max]
          Length = 400

 Score =  116 bits (290), Expect = 3e-24
 Identities = 57/111 (51%), Positives = 70/111 (63%)
 Frame = +1

Query: 1   GMRVKLLKQMGKHGQRKTARKVSGSENSTSVQTSDPAGEEDNHVSSKHHDDTPGEEDGEH 180
           GMRVKLLK MGK+G +K A K   SE ++S    +  G+E+NH S+ HH+DT  EEDG+H
Sbjct: 274 GMRVKLLKGMGKYGHKKQAWKGHHSEKNSS--RPEQTGDEENHGSNDHHEDTHEEEDGDH 331

Query: 181 LAKEKXXXXXXXXXXXXKQKYSGSNGQGHGTVPSNHVGETSKPPPGPRMPD 333
           L+K+K            K KY   NG GHG+ PS H  E SK PPGPRMPD
Sbjct: 332 LSKDKGGQRYRNQGRSRKHKYRAGNGMGHGSAPSTHAAEASKSPPGPRMPD 382


>ref|XP_002316726.1| predicted protein [Populus trichocarpa] gi|222859791|gb|EEE97338.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/111 (49%), Positives = 69/111 (62%)
 Frame = +1

Query: 1   GMRVKLLKQMGKHGQRKTARKVSGSENSTSVQTSDPAGEEDNHVSSKHHDDTPGEEDGEH 180
           GMRVK L QM KHGQR+   +   SE +   + ++ AG+ + H SS+HHDDTP EEDGEH
Sbjct: 171 GMRVKHLNQMAKHGQRRQVWREPDSEKNRKGRGTNLAGDVEKHDSSEHHDDTPVEEDGEH 230

Query: 181 LAKEKXXXXXXXXXXXXKQKYSGSNGQGHGTVPSNHVGETSKPPPGPRMPD 333
           ++KEK            K K+  +NG GHGT   N V E SK PPGP+MPD
Sbjct: 231 ISKEKNGQQGGNRGRSRKNKFRVTNGMGHGTTSYNAV-EFSKAPPGPKMPD 280


>ref|XP_003593945.1| La-related protein [Medicago truncatula]
           gi|355482993|gb|AES64196.1| La-related protein [Medicago
           truncatula] gi|388506372|gb|AFK41252.1| unknown
           [Medicago truncatula]
          Length = 406

 Score =  101 bits (252), Expect = 7e-20
 Identities = 52/112 (46%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   GMRVKLLKQMG-KHGQRKTARKVSGSENSTSVQTSDPAGEEDNHVSSKHHDDTPGEEDGE 177
           GMRVK L +M  K+ Q+K   K S SE + S   S+  G+E+NH S +H +D P  EDGE
Sbjct: 277 GMRVKFLSRMAVKYVQKKQPLKGSNSEKNGSSHVSEKTGDEENHGSHEHREDMPVVEDGE 336

Query: 178 HLAKEKXXXXXXXXXXXXKQKYSGSNGQGHGTVPSNHVGETSKPPPGPRMPD 333
           H++K+K            KQKY  +NG GHG   S    E SKPPPGP+MPD
Sbjct: 337 HVSKDKGGQRNSKQGRSRKQKYRATNGMGHGGTSSIRTTEPSKPPPGPKMPD 388


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