BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007605
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   166   1e-64
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    161   4e-62
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   135   5e-50
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         140   6e-50
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           134   4e-48

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  166 bits (421), Expect(2) = 1e-64
 Identities = 71/119 (59%), Positives = 95/119 (79%)
 Frame = +2

Query: 284 CYLINRSPSAPLDFQIPEKIWSGKDLSYSYLRVFGCKAFAHIPKEQRSKLDDKSTPCVFV 463
           CYLINRSPS PL F+IPE++W+ K++SYS+L+VFGC+AFAH+PKEQR+KLDDKS PC+F+
Sbjct: 618 CYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFI 677

Query: 464 GYGDAEFGYRLWDPVQKKLFRSRDVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQN 640
           GYGD EFGYRLWDPV+KK+ RSRDVVF E +    +D + + ++  +P+   +P    N
Sbjct: 678 GYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNN 736



 Score =  105 bits (263), Expect(2) = 1e-64
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +1

Query: 1   LKCLRSDNGGEYTSKEFAEYCSKHGIRHEQTVPGTPQHNGVAERMNRTIIERVRCM 168
           LK LRSDNGGEYTS+EF EYCS HGIRHE+TVPGTPQHNGVAERMNRTI+E+VR M
Sbjct: 544 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 599


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  161 bits (407), Expect(2) = 4e-62
 Identities = 70/116 (60%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
 Frame = +2

Query: 284 CYLINRSPSAPLDFQIPEKIWSGKDLSYSYLRVFGCKAFAHIPKEQRSKLDDKSTPCVFV 463
           CYLINRSPS PL+F IPE++W+ K++SYS+L+VFGCKAFAH+PKEQR+KLDDKS PC+F+
Sbjct: 619 CYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTKLDDKSVPCIFI 678

Query: 464 GYGDAEFGYRLWDPVQKKLFRSRDVVFHEHQNYEHSD--NATQPRDNRVPDLSEVP 625
           GYGD EFGYRLWD V+KK+ RSRDV+F E +    +D     + ++  +P+L  +P
Sbjct: 679 GYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKNGIIPNLVTIP 734



 Score =  103 bits (256), Expect(2) = 4e-62
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = +1

Query: 4   KCLRSDNGGEYTSKEFAEYCSKHGIRHEQTVPGTPQHNGVAERMNRTIIERVRCM 168
           K LR+DNGGEYTS+EF EYCS HGIRHE+TVPGTPQHNGVAERMNRTI+E+VR M
Sbjct: 546 KRLRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 600


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  135 bits (340), Expect(2) = 5e-50
 Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
 Frame = +2

Query: 287 YLINRSPSAPLDFQIPEKIWSGKDLSYSYLRVFGCKAFAHIPKEQRSKLDDKSTPCVFVG 466
           +++N +P  PL+F +P++IWS  ++SY +LRVFGCKAF HIPK++RSKLD K+ PCVF+G
Sbjct: 499 HVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIG 558

Query: 467 YGDAEFGYRLWDPVQKKLFRSRDVVFHEHQNYEHSDNATQPRDNRVPDLSEV-PPPVQN 640
           YG  E GYR +DPVQKKL RSRDVVF E    +  +           DL ++ P P+ N
Sbjct: 559 YGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTN 617



 Score = 88.6 bits (218), Expect(2) = 5e-50
 Identities = 39/56 (69%), Positives = 49/56 (87%)
 Frame = +1

Query: 1   LKCLRSDNGGEYTSKEFAEYCSKHGIRHEQTVPGTPQHNGVAERMNRTIIERVRCM 168
           LKC+R+DNGGEY+S  F EYC +HGIRH++T P TPQ NG+AERMNRT++ERVRC+
Sbjct: 425 LKCIRTDNGGEYSSP-FDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCL 479


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  140 bits (353), Expect(2) = 6e-50
 Identities = 62/114 (54%), Positives = 82/114 (71%)
 Frame = +2

Query: 287 YLINRSPSAPLDFQIPEKIWSGKDLSYSYLRVFGCKAFAHIPKEQRSKLDDKSTPCVFVG 466
           ++IN SP   L  ++P+K+W GKD+SY +LRVFGCKAF H+P+++RSKLD K+  C+F+G
Sbjct: 614 HVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIG 673

Query: 467 YGDAEFGYRLWDPVQKKLFRSRDVVFHEHQNYEHSDNATQPRDNRVPDLSEVPP 628
           YG  EFGYRL+DPV+KKL RSRDVVF E+Q  E  D   QP       L ++ P
Sbjct: 674 YGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDSGSLVDIEP 727



 Score = 83.2 bits (204), Expect(2) = 6e-50
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = +1

Query: 1   LKCLRSDNGGEYTSKEFAEYCSKHGIRHEQTVPGTPQHNGVAERMNRTIIERVRCM 168
           LKC+R+DNGGEY    F EYC ++GIRH++T P  PQ NG+AERMNRTI+ERVRCM
Sbjct: 540 LKCIRTDNGGEYCGP-FDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCM 594


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  134 bits (338), Expect(2) = 4e-48
 Identities = 62/116 (53%), Positives = 80/116 (68%)
 Frame = +2

Query: 287 YLINRSPSAPLDFQIPEKIWSGKDLSYSYLRVFGCKAFAHIPKEQRSKLDDKSTPCVFVG 466
           Y++N SP  PL ++ PEKIW G+D+SY  LRVFGCKA+ H+PK++RSKLD K+  CVF+G
Sbjct: 616 YVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIG 675

Query: 467 YGDAEFGYRLWDPVQKKLFRSRDVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPV 634
           YG    GY+ +DPV+KKL RSRDVVF E Q  E  D   +  D+      E+PP V
Sbjct: 676 YGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAE--FELPPTV 729



 Score = 82.8 bits (203), Expect(2) = 4e-48
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = +1

Query: 1   LKCLRSDNGGEYTSKEFAEYCSKHGIRHEQTVPGTPQHNGVAERMNRTIIERVRCM 168
           LKC+R+DNGGEY   +F  YC +HGIRH+ T P TPQ NG+AERMNRT+IER RC+
Sbjct: 542 LKCIRTDNGGEYQG-QFDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCL 596