BLASTX nr result

ID: Panax21_contig00006979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006979
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-li...    72   3e-10
emb|CBI36050.3| unnamed protein product [Vitis vinifera]               72   3e-10
gb|ADL36580.1| ARF domain class transcription factor [Malus x do...    71   7e-10
ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ric...    69   3e-09
gb|AEX00365.1| IAA26 [Solanum lycopersicum]                            68   6e-09

>ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
          Length = 364

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 43/69 (62%), Positives = 44/69 (63%)
 Frame = +2

Query: 1088 VVDLQNAEKKXXXXXXXXXXXXXXXXQKRTAPAPVVGWPPIRSFRKNLASSSSSKLPPVP 1267
            VVDLQN EKK                QKR+AP  VVGWPPIRSFRKNLASSSSSK  P  
Sbjct: 159  VVDLQNTEKKAFSPASANTAVPNSS-QKRSAPTAVVGWPPIRSFRKNLASSSSSK--PAN 215

Query: 1268 ESQHVVPKK 1294
            ESQ VVP K
Sbjct: 216  ESQDVVPNK 224


>emb|CBI36050.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 43/69 (62%), Positives = 44/69 (63%)
 Frame = +2

Query: 1088 VVDLQNAEKKXXXXXXXXXXXXXXXXQKRTAPAPVVGWPPIRSFRKNLASSSSSKLPPVP 1267
            VVDLQN EKK                QKR+AP  VVGWPPIRSFRKNLASSSSSK  P  
Sbjct: 159  VVDLQNTEKKAFSPASANTAVPNSS-QKRSAPTAVVGWPPIRSFRKNLASSSSSK--PAN 215

Query: 1268 ESQHVVPKK 1294
            ESQ VVP K
Sbjct: 216  ESQDVVPNK 224


>gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
          Length = 325

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 40/68 (58%), Positives = 42/68 (61%)
 Frame = +2

Query: 1091 VDLQNAEKKXXXXXXXXXXXXXXXXQKRTAPAPVVGWPPIRSFRKNLASSSSSKLPPVPE 1270
            VDLQNAE K                QKRTAPAPVVGWPPIRSFRKNLAS   S  P V E
Sbjct: 125  VDLQNAENKGFSPAPANTAVLPNTSQKRTAPAPVVGWPPIRSFRKNLASKKGSSKPAV-E 183

Query: 1271 SQHVVPKK 1294
            S++VV  K
Sbjct: 184  SENVVQIK 191


>ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
            gi|223544864|gb|EEF46379.1| Auxin-responsive protein
            IAA6, putative [Ricinus communis]
          Length = 320

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 41/71 (57%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +2

Query: 1085 VVVDLQ-NAEKKXXXXXXXXXXXXXXXXQKRTAPAPVVGWPPIRSFRKNLASSSSSKLPP 1261
            VVVDLQ +AEKK                QKRTAP PVVGWPPIRSFRKNLASS+SSK   
Sbjct: 128  VVVDLQQSAEKKAFSQPAPANTAVPNISQKRTAPGPVVGWPPIRSFRKNLASSNSSK--S 185

Query: 1262 VPESQHVVPKK 1294
              +SQ+  P K
Sbjct: 186  AADSQNESPNK 196


>gb|AEX00365.1| IAA26 [Solanum lycopersicum]
          Length = 287

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 40/67 (59%), Positives = 43/67 (64%)
 Frame = +2

Query: 1094 DLQNAEKKXXXXXXXXXXXXXXXXQKRTAPAPVVGWPPIRSFRKNLASSSSSKLPPVPES 1273
            DLQ+ EKK                QKRTAPAPVVGWPPIRSFRKNLASSSS K     E+
Sbjct: 94   DLQSTEKKKAFSQTATVQNSA---QKRTAPAPVVGWPPIRSFRKNLASSSSVK--SASET 148

Query: 1274 QHVVPKK 1294
            Q+VVP K
Sbjct: 149  QNVVPNK 155


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