BLASTX nr result

ID: Panax21_contig00006478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006478
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   194   1e-47
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]   192   4e-47
ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   190   2e-46
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             188   7e-46
gb|ABK22320.1| unknown [Picea sitchensis]                             183   2e-44

>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  194 bits (494), Expect = 1e-47
 Identities = 101/120 (84%), Positives = 102/120 (85%)
 Frame = -2

Query: 361 MSKLQSDALREAITQISNEAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 182
           MSKLQSDALREAIT I NE+KEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 181 KMKVCMLGDAQHVEEAEKIGLEYMDVEGXXXXXXXXXXXXXXXXKYHAFLASEAVIKQIP 2
           KMKVCMLGDAQHVEEAEKIGLEYMDVEG                KYHAFLASEAVIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score =  192 bits (489), Expect = 4e-47
 Identities = 100/119 (84%), Positives = 101/119 (84%)
 Frame = -2

Query: 358  SKLQSDALREAITQISNEAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 179
            SKLQSDALREAIT I NE+KEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 787  SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 846

Query: 178  MKVCMLGDAQHVEEAEKIGLEYMDVEGXXXXXXXXXXXXXXXXKYHAFLASEAVIKQIP 2
            MKVCMLGDAQHVEEAEKIGLEYMDVEG                KYHAFLASEAVIKQIP
Sbjct: 847  MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 905


>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  190 bits (482), Expect = 2e-46
 Identities = 98/120 (81%), Positives = 101/120 (84%)
 Frame = -2

Query: 361 MSKLQSDALREAITQISNEAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 182
           MSKLQS+ALREAITQI  +AKEKKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAITQIVGDAKEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 181 KMKVCMLGDAQHVEEAEKIGLEYMDVEGXXXXXXXXXXXXXXXXKYHAFLASEAVIKQIP 2
           KMK+CMLGDAQHVEEAEKIGLEYMDVEG                KYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  188 bits (478), Expect = 7e-46
 Identities = 95/120 (79%), Positives = 102/120 (85%)
 Frame = -2

Query: 361 MSKLQSDALREAITQISNEAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 182
           MSKLQSD LREAI+QI+N+++EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 181 KMKVCMLGDAQHVEEAEKIGLEYMDVEGXXXXXXXXXXXXXXXXKYHAFLASEAVIKQIP 2
           KMKVCMLGDAQHVEEAEKIGL+YMDVE                 KYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/120 (76%), Positives = 98/120 (81%)
 Frame = -2

Query: 361 MSKLQSDALREAITQISNEAKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 182
           MSKLQSD LRE ITQ+  E+K+KKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 181 KMKVCMLGDAQHVEEAEKIGLEYMDVEGXXXXXXXXXXXXXXXXKYHAFLASEAVIKQIP 2
           KMKVCMLGDAQH+EEAEKI L+YMDVEG                KYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120


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