BLASTX nr result

ID: Panax21_contig00006251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006251
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313010.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07
ref|XP_002533810.1| nuclear receptor binding set domain containi...    60   7e-07
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    59   2e-06
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    59   2e-06
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    59   2e-06

>ref|XP_002313010.1| predicted protein [Populus trichocarpa] gi|222849418|gb|EEE86965.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 96/362 (26%), Positives = 131/362 (36%), Gaps = 5/362 (1%)
 Frame = +2

Query: 2    KEDEGLSAVNKMENLVTEVEDSGVGGHEVKILGIEGTEKTEVAGEEERETSVVGGGGNFV 181
            KED  +    +M+N+V E E   V   E      EG EKT ++G        VGG    V
Sbjct: 201  KEDADVVDKVEMDNVVEEAETVKVKEEE------EGAEKTGISG--------VGGEVEAV 246

Query: 182  TKLSELQFGGVEAVSEVKGSGYGVED-ANEMELKADSKVDANEM-EVRADSKVDANEMEL 355
             +     F     V E K     V D A EME  A   ++  E+ E     K++ANE E 
Sbjct: 247  EQKEVTDF-----VEEGKAEKTEVADGAGEME--AVELIEMTEIVEEENVEKMEANEEEE 299

Query: 356  KADSKXXXXXXXXXXXXXXXXXKLKPESDKEDDVGMEEKPEMELVMGDDGKRETISKXXX 535
            K  ++                   K E    +++ + EK E   V G  G  E I++   
Sbjct: 300  KQPAQQVEMTDIAEETREDE----KNEMTDIEEMKVAEKIETTDVAG--GMEEVINEEG- 352

Query: 536  XXXXXXXQIAAEEIMGRENLKLGADLDVAEDT---VLEKENLAMEVLTETKVDEPESVPX 706
                        E+   E + +  + D  EDT   + EKEN A ++L     DE E    
Sbjct: 353  ------------EMKETEKIDVAEEGDKEEDTKVEMAEKENEAEDML-----DEMEGEMK 395

Query: 707  XXXXXXXXXXXXXXXXAKVDGGEPVPQLDDFQLAVXXXXXXXXXXXXXXXGIPXXXXXXX 886
                            AKV+  E   + +D    +               G         
Sbjct: 396  ETEMIDVAEEGDKEEDAKVEMAEKENEAEDMLDEMEGAEEEVEKGGTSGGG--------- 446

Query: 887  XXXXXXXSAXXXXXXXXXXXXXXXTAKAPGQKTTILVEEEDVCFICFDGGDLVLCDRKNC 1066
                                     AKAP + T+    EEDVCFICFDGG+LVLCDR+ C
Sbjct: 447  -----------------GKRKRQKNAKAPSRATSKKKTEEDVCFICFDGGELVLCDRRGC 489

Query: 1067 PK 1072
            PK
Sbjct: 490  PK 491


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
            putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
            nuclear receptor binding set domain containing protein 1,
            nsd, putative [Ricinus communis]
          Length = 1586

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = +2

Query: 971  PGQKTTILVEEEDVCFICFDGGDLVLCDRKNCPK 1072
            P +KTT   +EEDVCFICFDGG LVLCDR+ CPK
Sbjct: 119  PKRKTTTTDDEEDVCFICFDGGSLVLCDRRGCPK 152


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +2

Query: 962  AKAPGQKTTILVEEEDVCFICFDGGDLVLCDRKNCPK 1072
            AKA G+  +    EEDVCFICFDGGDLVLCDR+ CPK
Sbjct: 217  AKATGRVASRKKMEEDVCFICFDGGDLVLCDRRGCPK 253


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 962  AKAPGQKTTILVEEEDVCFICFDGGDLVLCDRKNCPK 1072
            +KAP +  +    EEDVCFICFDGGDLVLCDR+ CPK
Sbjct: 176  SKAPARVASRKKVEEDVCFICFDGGDLVLCDRRGCPK 212


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 962  AKAPGQKTTILVEEEDVCFICFDGGDLVLCDRKNCPK 1072
            +KAP +  +    EEDVCFICFDGGDLVLCDR+ CPK
Sbjct: 176  SKAPARVASRKKVEEDVCFICFDGGDLVLCDRRGCPK 212


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