BLASTX nr result

ID: Panax21_contig00006222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006222
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271645.1| PREDICTED: rae1-like protein At1g80670 [Viti...   614   e-173
ref|XP_002274315.1| PREDICTED: rae1-like protein At1g80670 [Viti...   608   e-172
gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]                   608   e-171
ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative ...   606   e-171
ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycin...   601   e-169

>ref|XP_002271645.1| PREDICTED: rae1-like protein At1g80670 [Vitis vinifera]
           gi|296081523|emb|CBI20046.3| unnamed protein product
           [Vitis vinifera]
          Length = 350

 Score =  614 bits (1583), Expect = e-173
 Identities = 284/319 (89%), Positives = 302/319 (94%), Gaps = 1/319 (0%)
 Frame = -2

Query: 955 MSAFG-VSTAANPNPNKSTDVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVMRNGT 779
           MS F  ++TA+NPNPNKS +VAQPPSDSVSSL FSPKAN LVATSWDNQVRCWE+MRNG 
Sbjct: 1   MSNFSSITTASNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQVRCWEIMRNGP 60

Query: 778 TLGTVGKAQISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKD 599
           T+G+V KA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAP+K+
Sbjct: 61  TVGSVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKE 120

Query: 598 LAWIPEMNLLVTGSWDKTIRYWDLRQSNPAHVQQLPERCYALTVRHPLMVVGTADRNLIV 419
           +AWIPEMNLL TGSWDKT++YWD RQ NP H QQLP+RCYALTVRHPLMVVGTADRNLIV
Sbjct: 121 VAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIV 180

Query: 418 FNLQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQSKNFTFKC 239
           FNLQNPQTEFKRI SPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD++QQSKNFTFKC
Sbjct: 181 FNLQNPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKC 240

Query: 238 HREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSAFNND 59
           HREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCS PIPCS FNND
Sbjct: 241 HREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNND 300

Query: 58  GSIYAYAVCYDWSKGAENH 2
           GSI+AY+VCYDWSKGAENH
Sbjct: 301 GSIFAYSVCYDWSKGAENH 319


>ref|XP_002274315.1| PREDICTED: rae1-like protein At1g80670 [Vitis vinifera]
           gi|297743618|emb|CBI36485.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  608 bits (1569), Expect = e-172
 Identities = 280/311 (90%), Positives = 296/311 (95%)
 Frame = -2

Query: 934 TAANPNPNKSTDVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVMRNGTTLGTVGKA 755
           +AANPNPNKS +VAQPP+DSVSSL FSPKANFLVATSWDNQVRCWE+ R+G T G+V KA
Sbjct: 5   SAANPNPNKSIEVAQPPTDSVSSLKFSPKANFLVATSWDNQVRCWEITRDGATTGSVPKA 64

Query: 754 QISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDLAWIPEMN 575
            ISHDQPVLCSAWKDDGT VFSGGCDKQVKMWPLLSGGQPVTVAMHDAP+K++AW+PEMN
Sbjct: 65  SISHDQPVLCSAWKDDGTIVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWVPEMN 124

Query: 574 LLVTGSWDKTIRYWDLRQSNPAHVQQLPERCYALTVRHPLMVVGTADRNLIVFNLQNPQT 395
           LLVTGSWDKTI+YWD RQSNP H QQLP+RCYA TVRHPLMVVGTADRNLIVFNLQNPQT
Sbjct: 125 LLVTGSWDKTIKYWDTRQSNPVHTQQLPDRCYAFTVRHPLMVVGTADRNLIVFNLQNPQT 184

Query: 394 EFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQSKNFTFKCHREGNEIY 215
           EFKRI SPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD++QQSKNFTFKCHREGNEIY
Sbjct: 185 EFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREGNEIY 244

Query: 214 SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSAFNNDGSIYAYAV 35
           SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCS PIPCSAFNNDGSI+ Y+V
Sbjct: 245 SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNNDGSIFVYSV 304

Query: 34  CYDWSKGAENH 2
           CYDWSKGAENH
Sbjct: 305 CYDWSKGAENH 315


>gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]
          Length = 347

 Score =  608 bits (1567), Expect = e-171
 Identities = 285/318 (89%), Positives = 297/318 (93%)
 Frame = -2

Query: 955 MSAFGVSTAANPNPNKSTDVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVMRNGTT 776
           MS FG + AAN NPNKST+V QPPSDSVSSLCFSPKANFL+ATSWDNQVRCWEVM +GT 
Sbjct: 1   MSIFGAAAAANTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWDNQVRCWEVMGSGTN 60

Query: 775 LGTVGKAQISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDL 596
           +GT  KA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPL  GGQ VTV MHDAPVKDL
Sbjct: 61  VGTAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPL--GGQAVTVGMHDAPVKDL 118

Query: 595 AWIPEMNLLVTGSWDKTIRYWDLRQSNPAHVQQLPERCYALTVRHPLMVVGTADRNLIVF 416
           AWIPEM+LLVTGSWDKT+RYWDLRQ NPAHVQQLPERCYALTV+HPLMV   ADRNL+VF
Sbjct: 119 AWIPEMSLLVTGSWDKTLRYWDLRQPNPAHVQQLPERCYALTVKHPLMVAAMADRNLVVF 178

Query: 415 NLQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQSKNFTFKCH 236
           NLQNPQTEFKRI SPLKYQTRC+AAFPDQQGFLVGSIEGRVGVHHLD+SQQSKNFTFKCH
Sbjct: 179 NLQNPQTEFKRITSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH 238

Query: 235 REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSAFNNDG 56
           REGNEIYSVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLKAMSRCS PIPCSAFN+DG
Sbjct: 239 REGNEIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNHDG 298

Query: 55  SIYAYAVCYDWSKGAENH 2
           SIYAYAVCYDWSKGAENH
Sbjct: 299 SIYAYAVCYDWSKGAENH 316


>ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
           gi|223533320|gb|EEF35072.1| plant poly(A)+ RNA export
           protein, putative [Ricinus communis]
          Length = 349

 Score =  606 bits (1562), Expect = e-171
 Identities = 274/318 (86%), Positives = 299/318 (94%)
 Frame = -2

Query: 955 MSAFGVSTAANPNPNKSTDVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVMRNGTT 776
           M+ FG +  AN NPNKS +V+QPPSDSVSSLCFSPKANFLVATSWDNQVRCWE+ RNGTT
Sbjct: 1   MATFGAAATANQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEITRNGTT 60

Query: 775 LGTVGKAQISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDL 596
           +G+V K QI+HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAP+K++
Sbjct: 61  IGSVPKTQITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEI 120

Query: 595 AWIPEMNLLVTGSWDKTIRYWDLRQSNPAHVQQLPERCYALTVRHPLMVVGTADRNLIVF 416
           AWIPEMNLL TGSWDKT++YWD RQSNP H QQLP+RCYA+TVR+PLMVVGTADRNLIVF
Sbjct: 121 AWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAMTVRYPLMVVGTADRNLIVF 180

Query: 415 NLQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQSKNFTFKCH 236
           NLQ PQTE+KRI SPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD++QQ+KNFTFKCH
Sbjct: 181 NLQQPQTEYKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQNKNFTFKCH 240

Query: 235 REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSAFNNDG 56
           R+GN+IYSVN+LNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRC  PIPC  FNNDG
Sbjct: 241 RDGNDIYSVNALNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCPLPIPCCTFNNDG 300

Query: 55  SIYAYAVCYDWSKGAENH 2
           SI+AY+VCYDWSKGAENH
Sbjct: 301 SIFAYSVCYDWSKGAENH 318


>ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycine max]
           gi|255638763|gb|ACU19686.1| unknown [Glycine max]
          Length = 347

 Score =  601 bits (1550), Expect = e-169
 Identities = 277/318 (87%), Positives = 296/318 (93%)
 Frame = -2

Query: 955 MSAFGVSTAANPNPNKSTDVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVMRNGTT 776
           MS FG   AAN NPNKS +VAQPPSDS+SS+CFSPKANFLVATSWDNQVRCWE+ RNGT 
Sbjct: 1   MSTFGA--AANTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWDNQVRCWEITRNGTV 58

Query: 775 LGTVGKAQISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDL 596
           + +  KA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPL+SGGQP+TVAMHDAPVKD+
Sbjct: 59  VNSTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLMSGGQPMTVAMHDAPVKDI 118

Query: 595 AWIPEMNLLVTGSWDKTIRYWDLRQSNPAHVQQLPERCYALTVRHPLMVVGTADRNLIVF 416
           AWI EMNLL TGSWDKT++YWD RQSNP H QQLP+RCYA+TV+HPLMVVGTADRNLIVF
Sbjct: 119 AWISEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAITVKHPLMVVGTADRNLIVF 178

Query: 415 NLQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQSKNFTFKCH 236
           NLQNPQTE+KRIVSPLKYQTR VAAFPDQQGFLVGSIEGRVGVHHLD++QQ+KNFTFKCH
Sbjct: 179 NLQNPQTEYKRIVSPLKYQTRSVAAFPDQQGFLVGSIEGRVGVHHLDDAQQNKNFTFKCH 238

Query: 235 REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSAFNNDG 56
           RE NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM RCS PIPCS FNNDG
Sbjct: 239 RENNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMQRCSQPIPCSTFNNDG 298

Query: 55  SIYAYAVCYDWSKGAENH 2
           SI+AYAVCYDWSKGAENH
Sbjct: 299 SIFAYAVCYDWSKGAENH 316


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