BLASTX nr result

ID: Panax21_contig00006137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006137
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246...   328   2e-87
emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]   322   2e-85
ref|XP_002510750.1| protein with unknown function [Ricinus commu...   317   4e-84
ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   317   6e-84
ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83

>ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
          Length = 247

 Score =  328 bits (842), Expect = 2e-87
 Identities = 170/272 (62%), Positives = 192/272 (70%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1187 MVSPIVRMGNEEMGPPWLKPLLKANYFVPCLSHGDSNKSECNMYCLDCMGNALCSYCLIH 1008
            MVS I RMGN+ +GPPWLKP+L+A+YFVPC  HGDSNKSECNM+CLDCMG+ALCSYCLIH
Sbjct: 1    MVSSIGRMGNDHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIH 60

Query: 1007 HKDHHVIQIRRSSYHNVVRVNEIQKYIDIACVQTYIINSAKIVFLNERPQPRPGKGVTNT 828
            HKDH V+QIRRSSYHNVVRVNEIQKYIDI+CVQTY+INSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HKDHCVVQIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNT 120

Query: 827  CEICGRSLLDSFRFCSLGCKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 648
            CEIC RSLLDSFRFCSLGCKLG                                      
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGS------------- 167

Query: 647  YFESDEPSTPKKIRRAHVFDQ-FLNAPMFSSDFRRIYGGVYNKSSGSTSGDEEQGIHCIS 471
              ESDE STP+K +R H+F +  ++ P  S D         +KS+ S+SGDE   I+ IS
Sbjct: 168  --ESDESSTPRKFQRTHLFSRLMIDGPTISLDGHHDATVAADKSTASSSGDET--INNIS 223

Query: 470  PGTPPIFNHRNSNGIRHSSSRRRKGIPHRAPF 375
            P TPPIFN        HS++RRRKGIPHRAPF
Sbjct: 224  PATPPIFN--------HSNARRRKGIPHRAPF 247


>emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]
          Length = 240

 Score =  322 bits (824), Expect = 2e-85
 Identities = 165/265 (62%), Positives = 187/265 (70%), Gaps = 1/265 (0%)
 Frame = -2

Query: 1166 MGNEEMGPPWLKPLLKANYFVPCLSHGDSNKSECNMYCLDCMGNALCSYCLIHHKDHHVI 987
            MGN+ +GPPWLKP+L+A+YFVPC  HGDSNKSECNM+CLDCMG+ALCSYCLIHHKDH V+
Sbjct: 1    MGNDHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVV 60

Query: 986  QIRRSSYHNVVRVNEIQKYIDIACVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICGRS 807
            QIRRSSYHNVVRVNEIQKYIDI+CVQTY+INSAKIVFLNERPQPRPGKGVTNTCEIC RS
Sbjct: 61   QIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRS 120

Query: 806  LLDSFRFCSLGCKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFESDEP 627
            LLDSFRFCSLGCKLG                                        ESDE 
Sbjct: 121  LLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGS---------------ESDES 165

Query: 626  STPKKIRRAHVFDQ-FLNAPMFSSDFRRIYGGVYNKSSGSTSGDEEQGIHCISPGTPPIF 450
            STP+K +R H+F +  ++ P  S D         +KS+ S+SGDE   I+ ISP TPPIF
Sbjct: 166  STPRKFQRTHLFSRLMIDGPTISLDGHHDATVAADKSTASSSGDET--INNISPATPPIF 223

Query: 449  NHRNSNGIRHSSSRRRKGIPHRAPF 375
            N        HS++RRRKGIPHRAPF
Sbjct: 224  N--------HSNARRRKGIPHRAPF 240


>ref|XP_002510750.1| protein with unknown function [Ricinus communis]
            gi|223551451|gb|EEF52937.1| protein with unknown function
            [Ricinus communis]
          Length = 235

 Score =  317 bits (813), Expect = 4e-84
 Identities = 164/272 (60%), Positives = 188/272 (69%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1187 MVSPIVRMGNEEMGPPWLKPLLKANYFVPCLSHGDSNKSECNMYCLDCMGNALCSYCLIH 1008
            MVSP  +M + ++GPPWL+P+L+A+YFVPC  HGDSNKSECN++CLDCMGNALCSYCLI+
Sbjct: 1    MVSPFGQMVHHDLGPPWLRPMLRASYFVPCSFHGDSNKSECNLFCLDCMGNALCSYCLIN 60

Query: 1007 HKDHHVIQIRRSSYHNVVRVNEIQKYIDIACVQTYIINSAKIVFLNERPQPRPGKGVTNT 828
            HKDH ++QIRRSSYHNVVRVNEIQKYIDI+CVQTYIINSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HKDHRIVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNT 120

Query: 827  CEICGRSLLDSFRFCSLGCKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 648
            CEIC RSLLDSFRFCSLGCKLG                                      
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFTLRMKHNRDPFLGGS------------ 168

Query: 647  YFESDEPSTPKKIRRAHVFDQFLNA-PMFSSDFRRIYGGVYNKSSGSTSGDEEQGIHCIS 471
              ESDE STPKKIR+ H F++ ++   ++SSD             G +SGDE      IS
Sbjct: 169  --ESDESSTPKKIRKTHAFNRLMDGLSIYSSD-------------GHSSGDE--ATTNIS 211

Query: 470  PGTPPIFNHRNSNGIRHSSSRRRKGIPHRAPF 375
            P TPPI+NHRN        +RRRKGIPHRAPF
Sbjct: 212  PSTPPIYNHRN--------ARRRKGIPHRAPF 235


>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222856458|gb|EEE94005.1| predicted protein [Populus
            trichocarpa]
          Length = 238

 Score =  317 bits (811), Expect = 6e-84
 Identities = 165/272 (60%), Positives = 184/272 (67%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1187 MVSPIVRMGNEEMGPPWLKPLLKANYFVPCLSHGDSNKSECNMYCLDCMGNALCSYCLIH 1008
            MVS   +MGN +MGPPWL P+L+A+YF+PC  HG+SNKSECNM+CLDCMGNA CSYCLI+
Sbjct: 1    MVSSFGQMGNHDMGPPWLIPMLRASYFIPCGVHGESNKSECNMFCLDCMGNAFCSYCLIY 60

Query: 1007 HKDHHVIQIRRSSYHNVVRVNEIQKYIDIACVQTYIINSAKIVFLNERPQPRPGKGVTNT 828
            HKDH V+QIRRSSYHNVVRVNEIQKYIDI+CVQTYIINSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HKDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNT 120

Query: 827  CEICGRSLLDSFRFCSLGCKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 648
            CEIC RSLLDSFRFCSLGCKLG                                      
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFAVKLKHNRDPFFGGS------------ 168

Query: 647  YFESDEPSTPKKIRRAHVFDQFLNA-PMFSSDFRRIYGGVYNKSSGSTSGDEEQGIHCIS 471
              ESDE STPKKIRR H F++ +    ++SS          N     +SGD+      IS
Sbjct: 169  --ESDESSTPKKIRRTHAFNRLMEGLSIYSS----------NNDGAESSGDD--AATNIS 214

Query: 470  PGTPPIFNHRNSNGIRHSSSRRRKGIPHRAPF 375
            P TPPIFNHRN        +RRRKGIPHRAPF
Sbjct: 215  PATPPIFNHRN--------ARRRKGIPHRAPF 238


>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  314 bits (805), Expect = 3e-83
 Identities = 163/271 (60%), Positives = 182/271 (67%)
 Frame = -2

Query: 1187 MVSPIVRMGNEEMGPPWLKPLLKANYFVPCLSHGDSNKSECNMYCLDCMGNALCSYCLIH 1008
            MVSP  +M N + GPPWL P+L+A+YF+PC  HG+SNKSECNM+CLDCMGNA CSYCLI+
Sbjct: 1    MVSPFGQMRNHDTGPPWLIPMLRASYFIPCAVHGESNKSECNMFCLDCMGNAFCSYCLIY 60

Query: 1007 HKDHHVIQIRRSSYHNVVRVNEIQKYIDIACVQTYIINSAKIVFLNERPQPRPGKGVTNT 828
            H+DH V+QIRRSSYHNVVRVNEIQKYIDI+CVQTYIINSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HRDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNT 120

Query: 827  CEICGRSLLDSFRFCSLGCKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 648
            CEIC RSLLDSFRFCSLGCKLG                                      
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFALKLKQNRDPFFGGS------------ 168

Query: 647  YFESDEPSTPKKIRRAHVFDQFLNAPMFSSDFRRIYGGVYNKSSGSTSGDEEQGIHCISP 468
              ESDE STPKKIRR H F++ +       D   IY    N     +SGD+      ISP
Sbjct: 169  --ESDESSTPKKIRRTHAFNRLM-------DGLSIYSS--NNDGAESSGDD--AATNISP 215

Query: 467  GTPPIFNHRNSNGIRHSSSRRRKGIPHRAPF 375
             TPP+FNHRN        +RRRKGIPHRAPF
Sbjct: 216  ATPPLFNHRN--------ARRRKGIPHRAPF 238


Top