BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006092
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   367   4e-99
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              367   4e-99
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       347   4e-93
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   342   9e-92
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...   336   6e-90

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  367 bits (941), Expect = 4e-99
 Identities = 204/378 (53%), Positives = 260/378 (68%), Gaps = 8/378 (2%)
 Frame = +2

Query: 8    YVNSLCP-GSSN--LRQRGPSRRYLLSLSLEDRFKTWFLEGPAVHRFDALKHLAPNDSVE 178
            YVNSLCP G SN   R +G SRR+LLS+ LE+RFKT   EGP VHRF ALKH AP++SVE
Sbjct: 296  YVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVE 355

Query: 179  DVLGVLQKLCYLVQGLWVPKSSLLYP--QGLEALVRDYSLYLFSKSHHILYKEIPQKSKI 352
            DVLGVL K  +LVQGLWVPKSSLL+P  QG+  L RDY L LFSK   I Y ++     +
Sbjct: 356  DVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSL 415

Query: 353  ASPMKNMLSVFAVERPGFNDWKFKEPKDMSFVKLYPDIVKEQEQAWESRGELVYLQIY-G 529
               +K  LS+ AVERP F DWKFKEP D+SF+KL+PDIV+EQ + WES  + +   I+ G
Sbjct: 416  NKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG 475

Query: 530  ERSNPGMKNPPKTNTTDKHVSMEPTNKGVPKTLNRAPA-KTSISDETREALLKALQKLFQ 706
             R  P  KN  K +  +K       + G  +  N  P  +T++S ETREAL KAL+++F+
Sbjct: 476  GRRGPVTKNSGKPSIANK-TGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFR 534

Query: 707  TYKVCSFQRICQLLRDMATSEANRPK-GAREMISAASGLEAPPEELRAIINQVAIDIHGV 883
             +KVCSFQ ICQ LRD+A S++  PK   R  ++AA G +AP EEL AII++ A  +HGV
Sbjct: 535  LHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 594

Query: 884  FVSKSSPDHSFDGLRKIVIDLLIVEGPNAKLKKASIIEAGKMGLKREEIPNVEYNKVMNE 1063
            +V K+S     + LRK+V+DL   + PNAKLK+A I+EA K+ LK+ EI   EYNKV++E
Sbjct: 595  YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKK-EITTHEYNKVVSE 653

Query: 1064 LCVSRGSVWVLKSGDGSP 1117
            LC SRGS+WVLKSGDG P
Sbjct: 654  LCESRGSLWVLKSGDGKP 671


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  367 bits (941), Expect = 4e-99
 Identities = 204/378 (53%), Positives = 260/378 (68%), Gaps = 8/378 (2%)
 Frame = +2

Query: 8    YVNSLCP-GSSN--LRQRGPSRRYLLSLSLEDRFKTWFLEGPAVHRFDALKHLAPNDSVE 178
            YVNSLCP G SN   R +G SRR+LLS+ LE+RFKT   EGP VHRF ALKH AP++SVE
Sbjct: 312  YVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVE 371

Query: 179  DVLGVLQKLCYLVQGLWVPKSSLLYP--QGLEALVRDYSLYLFSKSHHILYKEIPQKSKI 352
            DVLGVL K  +LVQGLWVPKSSLL+P  QG+  L RDY L LFSK   I Y ++     +
Sbjct: 372  DVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSL 431

Query: 353  ASPMKNMLSVFAVERPGFNDWKFKEPKDMSFVKLYPDIVKEQEQAWESRGELVYLQIY-G 529
               +K  LS+ AVERP F DWKFKEP D+SF+KL+PDIV+EQ + WES  + +   I+ G
Sbjct: 432  NKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG 491

Query: 530  ERSNPGMKNPPKTNTTDKHVSMEPTNKGVPKTLNRAPA-KTSISDETREALLKALQKLFQ 706
             R  P  KN  K +  +K       + G  +  N  P  +T++S ETREAL KAL+++F+
Sbjct: 492  GRRGPVTKNSGKPSIANK-TGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFR 550

Query: 707  TYKVCSFQRICQLLRDMATSEANRPK-GAREMISAASGLEAPPEELRAIINQVAIDIHGV 883
             +KVCSFQ ICQ LRD+A S++  PK   R  ++AA G +AP EEL AII++ A  +HGV
Sbjct: 551  LHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 610

Query: 884  FVSKSSPDHSFDGLRKIVIDLLIVEGPNAKLKKASIIEAGKMGLKREEIPNVEYNKVMNE 1063
            +V K+S     + LRK+V+DL   + PNAKLK+A I+EA K+ LK+ EI   EYNKV++E
Sbjct: 611  YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKK-EITTHEYNKVVSE 669

Query: 1064 LCVSRGSVWVLKSGDGSP 1117
            LC SRGS+WVLKSGDG P
Sbjct: 670  LCESRGSLWVLKSGDGKP 687


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  347 bits (890), Expect = 4e-93
 Identities = 192/376 (51%), Positives = 250/376 (66%), Gaps = 5/376 (1%)
 Frame = +2

Query: 5    NYVNSLCPGSSNLRQ--RGPSRRYLLSLSLEDRFKTWFLEGPAVHRFDALKHLAPNDSVE 178
            +YVN+LCPG+SN      GPSR  LLSL LE+RF+TW L+GP +HRFDALKHLAP+ SVE
Sbjct: 310  DYVNTLCPGTSNENNGSNGPSR-VLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVE 368

Query: 179  DVLGVLQKLCYLVQGLWVPKSSLLY--PQGLEALVRDYSLYLFSKSHHILYKEIPQKSKI 352
            D+L VL +   LVQGLW+PKSSLLY   QG++AL RDY L LFS++  I   ++PQ+ K+
Sbjct: 369  DILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKL 428

Query: 353  ASPMKNMLSVFAVERPGFNDWKFKEPKDMSFVKLYPDIVKEQEQAWESRGELVYLQIYGE 532
               M+++L   A ER   NDWKFKEP DM+F+KL P IV+EQEQ WE   +L+  +I+G+
Sbjct: 429  NRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGD 488

Query: 533  RSNPGMKNPPKTNTTDKHVSMEPTNKGVPKTLNRAPAKTSISDETREALLKALQKLFQTY 712
            ++ P  KN  +  TT+   + +  +K    +LN    +  +S+ETREAL KALQKLFQ++
Sbjct: 489  KNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSH 548

Query: 713  KVCSFQRICQLLRDMATSEANRPKG-AREMISAASGLEAPPEELRAIINQVAIDIHGVFV 889
            KVC FQ+ICQ LR+MA SE++RPKG ARE I+AA G+EAPPEEL+AII+QVAI+IHGV+V
Sbjct: 549  KVC-FQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYV 607

Query: 890  SKSSPDHSFDGLRKIVIDLLIVEGPNAKLKKASIIEAGKMGLKREEIPNVEYNKVMNELC 1069
             KSSP H                                   + +E        V+ ELC
Sbjct: 608  LKSSPVHP----------------------------------EHDEF-------VVQELC 626

Query: 1070 VSRGSVWVLKSGDGSP 1117
            VS+GS WVLKSGDG+P
Sbjct: 627  VSQGSAWVLKSGDGNP 642


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  342 bits (878), Expect = 9e-92
 Identities = 190/361 (52%), Positives = 250/361 (69%), Gaps = 11/361 (3%)
 Frame = +2

Query: 5    NYVNSLCPGSSN--LRQRGPSRRYLLSLSLEDRFKTWFLEGPAVHRFDALKHLAPNDSVE 178
            +Y++SLCP +SN   + +GP RR+LLSL L +R K   LEGP V RF  LKH AP+DSVE
Sbjct: 306  DYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVE 365

Query: 179  DVLGVLQKLCYLVQGLWVPKSSLLYPQ-GLEALVRDYSLYLFSKSHHILYKEIPQKSKIA 355
            DVL VLQ+   LVQGLW PKSSLL+P    +  +RDY L LFSK+  I   ++    KI 
Sbjct: 366  DVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIK 425

Query: 356  SPMKNMLSVFAVERPGFNDWKFKEPKDMSFVKLYPDIVKEQEQAWESRGELVYLQIYGER 535
              +K+ L++FAVERP F DWKFKE  D +F+KLYPDIVK+QE+AW++  E    +++   
Sbjct: 426  EEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNT-EKRLSKVFDRS 484

Query: 536  SNPGMKN----PPKTNTTDKHVSMEPTNKGVPKTLN--RAPAKTSISDETREALLKALQK 697
                MKN    PP  + T KH+  E   K +PK  +  R   KT+I+ ETREALLKAL K
Sbjct: 485  GKASMKNAIPKPPMVHNTVKHLDSE---KSMPKIASGMRRLTKTTITVETREALLKALPK 541

Query: 698  LFQTYKVCSFQRICQLLRDMATSEANRPKG-AREMISAASGLEAPPEELRAIINQVAIDI 874
            +FQ++KVCSFQ ICQ LRD+A S++  PK   R  ++AASG +APPEEL+ II+QVA +I
Sbjct: 542  VFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAPPEELQEIISQVATNI 601

Query: 875  HGVFVSKSSPDH-SFDGLRKIVIDLLIVEGPNAKLKKASIIEAGKMGLKREEIPNVEYNK 1051
            HG +V KSSP+H  +D LRK++IDLL+  GPNAKLKKA + EA ++  KR ++ N+EYNK
Sbjct: 602  HGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKR-DVTNIEYNK 660

Query: 1052 V 1054
            +
Sbjct: 661  L 661


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  336 bits (862), Expect = 6e-90
 Identities = 196/386 (50%), Positives = 252/386 (65%), Gaps = 14/386 (3%)
 Frame = +2

Query: 5    NYVNSLCPGSSN--LRQRGPSRRYLLSLSLEDRFKTWFLEGPAVHRFDALKHLAPNDSVE 178
            +Y++SLCPG SN  ++  GPSRR LLSL LE+R K  FLEGP +HRF AL+HL PNDS+E
Sbjct: 311  DYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIE 370

Query: 179  DVLGVLQKLCYLVQGLWVPKSSLLYP-----QGLEALVRDYSLYLFSKSHHILYKE--IP 337
            D+L VLQ+   LVQGLWVPK+SLL+P     + ++   RDY L LFSKS  +   E  +P
Sbjct: 371  DLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELNVP 430

Query: 338  QKSKIASPMKNMLSVFAVERPGFNDWKFKEPKDMSFVKLYPDIVKEQEQAWESRGELVYL 517
             K  I   +K+ L++FAVERP F DWKFKE  D  FV+LYPDIV++QEQAWE  G+ +  
Sbjct: 431  MKPLI---LKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNI-- 485

Query: 518  QIYGERSNPGMKNPPKTNTTDKHVSMEPTNKGVPKTLNRAPAKTSISDETREALLKALQK 697
                                    + +   K V K +   P KT ++DETREAL KAL K
Sbjct: 486  ----------------------SAAFDRAGKSVSKNVITKPKKT-MTDETREALRKALPK 522

Query: 698  LFQTYKVC--SFQRICQLLRDMATSEANRPKG-AREMISAASGLEAPPEELRAIINQVAI 868
            + QT+KVC   FQ ICQ LR +A S++  PK   R  ++AASG EAPPEEL+ +I++VA 
Sbjct: 523  VLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVAT 582

Query: 869  DIHGVFVSKSSPDH-SFDGL-RKIVIDLLIVEGPNAKLKKASIIEAGKMGLKREEIPNVE 1042
            +IHG +V KSSP+H  FD L RK+VI L +  GPNA +KK+ +  A ++ LKRE   N E
Sbjct: 583  NIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLELKREP-SNSE 641

Query: 1043 YNKVMNELCVSRGSVWVLKSGDGSPN 1120
            Y KVM +LC S+GS WVLKSGDG P+
Sbjct: 642  YIKVMTDLCESKGSAWVLKSGDGKPS 667