BLASTX nr result

ID: Panax21_contig00004240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004240
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...   291   1e-76
ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...   290   2e-76
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...   290   2e-76
ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containin...   288   1e-75
gb|ACA24495.1| gamma reponse I-like protein [Cucumis sativus]         288   1e-75

>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
           communis] gi|223547687|gb|EEF49180.1| arginine/serine
           rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score =  291 bits (745), Expect = 1e-76
 Identities = 138/160 (86%), Positives = 149/160 (93%), Gaps = 1/160 (0%)
 Frame = -2

Query: 483 FYMKKAAQEERRRQPKQSKDEMPPPASLQGSGPG-KRGHHMGDYIPPEELNKFMATCNDV 307
           FYMKKAAQEERRRQPKQSKDEMPPP SLQG G   KRGHHMGDYIP EEL KF+ATCND 
Sbjct: 282 FYMKKAAQEERRRQPKQSKDEMPPPPSLQGPGASSKRGHHMGDYIPQEELEKFLATCNDA 341

Query: 306 SAQKAAKEATDRAKIQADNVGHRLLSKMGWKEGEGLGTSRSGIADPIKAGNVKIDNLGVG 127
           +AQ+AAKE+ +R+KIQADNVGH+LLSKMGWKEGEGLG++RSGIADPIKAGNVK +NLGVG
Sbjct: 342 AAQRAAKESAERSKIQADNVGHKLLSKMGWKEGEGLGSARSGIADPIKAGNVKTNNLGVG 401

Query: 126 ASQPGEVTPEDDIYEQYKKRMMLGYRYRPNPMNNPRKAYY 7
           A QPGEVTPEDDIYEQYKKRMMLGYRYRPNP+NNPRKAYY
Sbjct: 402 AHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 441


>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score =  290 bits (742), Expect = 2e-76
 Identities = 137/159 (86%), Positives = 149/159 (93%)
 Frame = -2

Query: 483 FYMKKAAQEERRRQPKQSKDEMPPPASLQGSGPGKRGHHMGDYIPPEELNKFMATCNDVS 304
           FYMKKAAQEERRRQPKQSKDEMPPPASLQ   PGK+GHHMGDYIP EEL KF++TCND +
Sbjct: 303 FYMKKAAQEERRRQPKQSKDEMPPPASLQT--PGKKGHHMGDYIPQEELEKFLSTCNDAA 360

Query: 303 AQKAAKEATDRAKIQADNVGHRLLSKMGWKEGEGLGTSRSGIADPIKAGNVKIDNLGVGA 124
           AQKAA+EA +RAKIQADNVGH+LLSKMGWKEGEGLG+SR+GIADPI AGNVK+DNLGVGA
Sbjct: 361 AQKAAREAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRNGIADPIMAGNVKLDNLGVGA 420

Query: 123 SQPGEVTPEDDIYEQYKKRMMLGYRYRPNPMNNPRKAYY 7
            QPGEVT +DDIYEQYKKRMMLGYRYRPNP+NNPRKAYY
Sbjct: 421 QQPGEVTADDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 459


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 2 [Vitis vinifera]
           gi|297736220|emb|CBI24858.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score =  290 bits (742), Expect = 2e-76
 Identities = 137/159 (86%), Positives = 149/159 (93%)
 Frame = -2

Query: 483 FYMKKAAQEERRRQPKQSKDEMPPPASLQGSGPGKRGHHMGDYIPPEELNKFMATCNDVS 304
           FYMKKAAQEERRRQPKQSKDEMPPPASLQ   PGK+GHHMGDYIP EEL KF++TCND +
Sbjct: 288 FYMKKAAQEERRRQPKQSKDEMPPPASLQT--PGKKGHHMGDYIPQEELEKFLSTCNDAA 345

Query: 303 AQKAAKEATDRAKIQADNVGHRLLSKMGWKEGEGLGTSRSGIADPIKAGNVKIDNLGVGA 124
           AQKAA+EA +RAKIQADNVGH+LLSKMGWKEGEGLG+SR+GIADPI AGNVK+DNLGVGA
Sbjct: 346 AQKAAREAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRNGIADPIMAGNVKLDNLGVGA 405

Query: 123 SQPGEVTPEDDIYEQYKKRMMLGYRYRPNPMNNPRKAYY 7
            QPGEVT +DDIYEQYKKRMMLGYRYRPNP+NNPRKAYY
Sbjct: 406 QQPGEVTADDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 444


>ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Cucumis sativus]
           gi|449489072|ref|XP_004158206.1| PREDICTED: SURP and
           G-patch domain-containing protein 1-like protein-like
           [Cucumis sativus]
          Length = 446

 Score =  288 bits (736), Expect = 1e-75
 Identities = 136/159 (85%), Positives = 147/159 (92%)
 Frame = -2

Query: 483 FYMKKAAQEERRRQPKQSKDEMPPPASLQGSGPGKRGHHMGDYIPPEELNKFMATCNDVS 304
           FYMKKAA+EER RQPKQSKDEMPPPASLQ S  GKRGHHMGD+IP EEL KF+ATCND S
Sbjct: 288 FYMKKAAREERMRQPKQSKDEMPPPASLQASALGKRGHHMGDFIPHEELEKFLATCNDAS 347

Query: 303 AQKAAKEATDRAKIQADNVGHRLLSKMGWKEGEGLGTSRSGIADPIKAGNVKIDNLGVGA 124
           A+K +KEA D+AKIQADNVGHRLLSKMGWKEGEGLG+S+SGIADPI AG+VK +NLGVGA
Sbjct: 348 ARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGA 407

Query: 123 SQPGEVTPEDDIYEQYKKRMMLGYRYRPNPMNNPRKAYY 7
            QPGEVTPEDDIYEQYKKRMMLGYRYRPNP+NNPRKAYY
Sbjct: 408 HQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446


>gb|ACA24495.1| gamma reponse I-like protein [Cucumis sativus]
          Length = 446

 Score =  288 bits (736), Expect = 1e-75
 Identities = 136/159 (85%), Positives = 147/159 (92%)
 Frame = -2

Query: 483 FYMKKAAQEERRRQPKQSKDEMPPPASLQGSGPGKRGHHMGDYIPPEELNKFMATCNDVS 304
           FYMKKAA+EER RQPKQSKDEMPPPASLQ S  GKRGHHMGD+IP EEL KF+ATCND S
Sbjct: 288 FYMKKAAREERMRQPKQSKDEMPPPASLQASALGKRGHHMGDFIPHEELEKFLATCNDAS 347

Query: 303 AQKAAKEATDRAKIQADNVGHRLLSKMGWKEGEGLGTSRSGIADPIKAGNVKIDNLGVGA 124
           A+K +KEA D+AKIQADNVGHRLLSKMGWKEGEGLG+S+SGIADPI AG+VK +NLGVGA
Sbjct: 348 ARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGA 407

Query: 123 SQPGEVTPEDDIYEQYKKRMMLGYRYRPNPMNNPRKAYY 7
            QPGEVTPEDDIYEQYKKRMMLGYRYRPNP+NNPRKAYY
Sbjct: 408 HQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446


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