BLASTX nr result
ID: Panax21_contig00004117
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004117 (676 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera] 98 1e-18 ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 96 8e-18 ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2... 95 1e-17 ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ... 94 2e-17 ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 94 3e-17 >emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera] Length = 692 Score = 98.2 bits (243), Expect = 1e-18 Identities = 51/80 (63%), Positives = 58/80 (72%) Frame = +1 Query: 28 GSPKVTRTNDSFGSPRVTRTSWISRWFHLLVALGVEIVIATPGRLIDMLETHHTNLRRVT 207 G+PK + D + W ++ + + LGVEIVIATPGRLIDMLE HTNLRRVT Sbjct: 406 GAPKGPQIRD-------LQRGWCTKILSIALMLGVEIVIATPGRLIDMLEAQHTNLRRVT 458 Query: 208 YLVLDEADRMLDMGFEPQIR 267 YLVLDEADRMLDMGFEPQIR Sbjct: 459 YLVLDEADRMLDMGFEPQIR 478 >ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera] gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera] Length = 506 Score = 95.5 bits (236), Expect = 8e-18 Identities = 46/47 (97%), Positives = 47/47 (100%) Frame = +1 Query: 127 GVEIVIATPGRLIDMLETHHTNLRRVTYLVLDEADRMLDMGFEPQIR 267 GVEIVIATPGRLIDMLE+HHTNLRRVTYLVLDEADRMLDMGFEPQIR Sbjct: 223 GVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIR 269 >ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1| predicted protein [Populus trichocarpa] Length = 497 Score = 94.7 bits (234), Expect = 1e-17 Identities = 45/47 (95%), Positives = 47/47 (100%) Frame = +1 Query: 127 GVEIVIATPGRLIDMLETHHTNLRRVTYLVLDEADRMLDMGFEPQIR 267 GVEIVIATPGRLIDM+E+HHTNLRRVTYLVLDEADRMLDMGFEPQIR Sbjct: 214 GVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFEPQIR 260 >ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 505 Score = 94.4 bits (233), Expect = 2e-17 Identities = 45/47 (95%), Positives = 47/47 (100%) Frame = +1 Query: 127 GVEIVIATPGRLIDMLETHHTNLRRVTYLVLDEADRMLDMGFEPQIR 267 GVEIVIATPGRLIDMLE+HHTNLRRVTYLVLDEADRMLDMGF+PQIR Sbjct: 222 GVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIR 268 >ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis sativus] Length = 505 Score = 93.6 bits (231), Expect = 3e-17 Identities = 44/47 (93%), Positives = 47/47 (100%) Frame = +1 Query: 127 GVEIVIATPGRLIDMLETHHTNLRRVTYLVLDEADRMLDMGFEPQIR 267 GVEIVIATPGRLIDM+E+HHTNLRRVTYLVLDEADRMLDMGF+PQIR Sbjct: 222 GVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIR 268