BLASTX nr result

ID: Panax21_contig00004095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004095
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514695.1| Protein C6orf149, putative [Ricinus communis...    63   4e-08
gb|AFG45814.1| Pinus taeda anonymous locus 0_14360_01 genomic se...    59   7e-07
gb|AFG45818.1| Pinus taeda anonymous locus 0_14360_01 genomic se...    58   9e-07
ref|XP_002284477.1| PREDICTED: LYR motif-containing protein 4 is...    57   2e-06
gb|AFG45824.1| Pinus taeda anonymous locus 0_14360_01 genomic se...    56   4e-06

>ref|XP_002514695.1| Protein C6orf149, putative [Ricinus communis]
           gi|223546299|gb|EEF47801.1| Protein C6orf149, putative
           [Ricinus communis]
          Length = 92

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = -2

Query: 560 YSKRRTIDGFRQNIQLTDPSSISAAFHEGKSQLLIAKRQVL 438
           Y+KRRTID FR+N  LTDPSSISAAF +GK+QL +AKRQV+
Sbjct: 29  YTKRRTIDAFRENRNLTDPSSISAAFSDGKAQLDVAKRQVV 69


>gb|AFG45814.1| Pinus taeda anonymous locus 0_14360_01 genomic sequence
           gi|383130211|gb|AFG45815.1| Pinus taeda anonymous locus
           0_14360_01 genomic sequence gi|383130213|gb|AFG45816.1|
           Pinus taeda anonymous locus 0_14360_01 genomic sequence
           gi|383130215|gb|AFG45817.1| Pinus taeda anonymous locus
           0_14360_01 genomic sequence gi|383130227|gb|AFG45823.1|
           Pinus taeda anonymous locus 0_14360_01 genomic sequence
          Length = 96

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -2

Query: 560 YSKRRTIDGFRQNIQLTDPSSISAAFHEGKSQLLIAKRQVL 438
           Y KRRTI+GFRQN QLTDP++I +AF EGKSQL +A RQ +
Sbjct: 36  YVKRRTIEGFRQNQQLTDPAAIVSAFAEGKSQLEVASRQAV 76


>gb|AFG45818.1| Pinus taeda anonymous locus 0_14360_01 genomic sequence
           gi|383130219|gb|AFG45819.1| Pinus taeda anonymous locus
           0_14360_01 genomic sequence
          Length = 96

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -2

Query: 560 YSKRRTIDGFRQNIQLTDPSSISAAFHEGKSQLLIAKRQVL 438
           Y KRRTI+GFRQN QLTDP+++ +AF EGKSQL +A RQ +
Sbjct: 36  YVKRRTIEGFRQNQQLTDPAAVVSAFTEGKSQLEVASRQAV 76


>ref|XP_002284477.1| PREDICTED: LYR motif-containing protein 4 isoform 1 [Vitis
           vinifera] gi|359491670|ref|XP_003634301.1| PREDICTED:
           LYR motif-containing protein 4 [Vitis vinifera]
          Length = 90

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = -2

Query: 560 YSKRRTIDGFRQNIQLTDPSSISAAFHEGKSQLLIAKRQVL 438
           Y+KRRTIDGFR N  ++DPSSI+AA+ + +SQL IA+RQV+
Sbjct: 32  YTKRRTIDGFRHNRHVSDPSSIAAAYSDAESQLQIARRQVI 72


>gb|AFG45824.1| Pinus taeda anonymous locus 0_14360_01 genomic sequence
          Length = 96

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 560 YSKRRTIDGFRQNIQLTDPSSISAAFHEGKSQLLIAKRQVL 438
           Y KRRT +GFRQN QLTDP++I +AF EGKSQL +A RQ +
Sbjct: 36  YVKRRTREGFRQNQQLTDPAAIVSAFAEGKSQLEVASRQAV 76


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