BLASTX nr result
ID: Panax21_contig00002947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00002947
(828 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003543838.1| PREDICTED: paired amphipathic helix protein ... 106 6e-35
ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ... 103 7e-35
ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein ... 102 8e-34
ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm... 87 2e-28
ref|XP_003618393.1| Paired amphipathic helix protein Sin3 [Medic... 82 2e-27
>ref|XP_003543838.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine
max]
Length = 1371
Score = 106 bits (265), Expect(2) = 6e-35
Identities = 70/168 (41%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Frame = -1
Query: 717 LEHHDVSRSIPLTNGVFTKGPNVPKCNEDSVYPSKIEKEEGELSPNGDFVEEIFVAFGGS 538
+E D++ +P+ NGV ++ V K +++SV P KIEKEEGELSPNGD E+ VA+G S
Sbjct: 897 VEGCDMATPVPVANGVLSESSKV-KTHDESVGPCKIEKEEGELSPNGDSEEDNIVAYGDS 955
Query: 537 H--PLRNAKKSAETMPYQARTGENTSCQXXXXXXXXXXXXXXXXXXXXAGEDVSGSESAA 364
+ + +K + E YQ+R GE+ SC AGEDVSGSESA
Sbjct: 956 NVQSMAKSKHNIERRKYQSRNGEDESCPEAGGDNDADADDEDSENVSEAGEDVSGSESAG 1015
Query: 363 XXXXXXXXXXXXXXXXXXXDGKAESECEDEGLDDTLAGGVGLSLPPSE 220
DGKAESE E EG+ D AGG G SLP SE
Sbjct: 1016 DECFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQAGGDGTSLPLSE 1063
Score = 67.8 bits (164), Expect(2) = 6e-35
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -3
Query: 127 VFYGNDSFYVLFRLHQILYERLLSAKQHSSTAEMKWR 17
VFYGND FYV FRLHQ LYERLLSAK HS +AEMKW+
Sbjct: 1090 VFYGNDDFYVFFRLHQALYERLLSAKTHSMSAEMKWK 1126
>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
vinifera]
Length = 1395
Score = 103 bits (257), Expect(2) = 7e-35
Identities = 78/206 (37%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Frame = -1
Query: 825 RMSMDFISGR-DAAQRPSTHAAENGHGVAGNTDDVHLLEHHDVSRSIPLTNGVFTKGPNV 649
R M+ +SG RP A E H D E DV R++ NGV ++G +
Sbjct: 883 RAHMEVMSGHVSTPSRPGNVAIEEAHEHKPGFDASS--EGGDVMRTVISANGVLSEGTKL 940
Query: 648 PKCNEDSVYPSKIEKEEGELSPNGDFVEEIFVAFG--GSHPLRNAKKSAETMPYQARTGE 475
K + +SV PSKIEKEEGELSPNGDF E+ FV +G + + AK S+E +QA G+
Sbjct: 941 NKYHAESVGPSKIEKEEGELSPNGDFEEDNFVVYGDASTQAVPLAKHSSERRQFQAGDGQ 1000
Query: 474 NTSCQXXXXXXXXXXXXXXXXXXXXAGEDVSGSESAAXXXXXXXXXXXXXXXXXXXDGKA 295
CQ AGEDVS SESA DGKA
Sbjct: 1001 ERDCQVAGGENGADADDEDSENVSEAGEDVSASESAGDECSRGEQEEEEDAEHDELDGKA 1060
Query: 294 ESECEDEGL-DDTLAGGVGLSLPPSE 220
ESE E +G+ D GG G+ LP SE
Sbjct: 1061 ESEGEADGVADANFVGGNGVILPLSE 1086
Score = 70.5 bits (171), Expect(2) = 7e-35
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = -3
Query: 127 VFYGNDSFYVLFRLHQILYERLLSAKQHSSTAEMKWRNVKD 5
VFYGND+FYVLFRLH++LYER+LSAK +S++AEMKWR KD
Sbjct: 1113 VFYGNDTFYVLFRLHRVLYERILSAKVNSTSAEMKWRASKD 1153
>ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine
max]
Length = 1383
Score = 102 bits (253), Expect(2) = 8e-34
Identities = 68/172 (39%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = -1
Query: 729 DVHLLEHHDVSRSIPLTNGVFTKGPNVPKCNEDSVYPSKIEKEEGELSPNGDFVEEIFVA 550
+V +E D++ +P+ NGV ++ V K +++S P KIEKEEGELSP GD E+ +VA
Sbjct: 900 NVPSVEGCDMATPVPVVNGVLSESSKV-KTHDESAGPCKIEKEEGELSPIGDSEEDNYVA 958
Query: 549 FGGSH--PLRNAKKSAETMPYQARTGENTSCQXXXXXXXXXXXXXXXXXXXXAGEDVSGS 376
+G S+ + +K + E YQ+R GE+ SC AGEDVSGS
Sbjct: 959 YGDSNVQSMAKSKHNVEKRKYQSRNGEDESCPEAGGDNDADADDEDSENVSEAGEDVSGS 1018
Query: 375 ESAAXXXXXXXXXXXXXXXXXXXDGKAESECEDEGLDDTLAGGVGLSLPPSE 220
ESA DGKAESE E EG+ D GG G SLP SE
Sbjct: 1019 ESAGDECFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQVGGDGTSLPLSE 1070
Score = 68.6 bits (166), Expect(2) = 8e-34
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -3
Query: 127 VFYGNDSFYVLFRLHQILYERLLSAKQHSSTAEMKWR 17
VFYGND FYVLFRLHQ LYER+LSAK HS +AEMKW+
Sbjct: 1097 VFYGNDDFYVLFRLHQALYERILSAKTHSMSAEMKWK 1133
>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
gi|223540688|gb|EEF42251.1| conserved hypothetical
protein [Ricinus communis]
Length = 1452
Score = 86.7 bits (213), Expect(2) = 2e-28
Identities = 69/200 (34%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Frame = -1
Query: 783 RPSTHAAENGHGVAGNTDDVHLLEHHDVSRSIPLTNGVFTKGPNVPKCNEDSVYPSKIEK 604
RPS A G G+ + +++ E D SR TNG+ +G + N++S KIE+
Sbjct: 947 RPSNGALNGGFGLGSSNENLPSAEGGDFSRPNISTNGLMIEGMRSQRYNDESAAQFKIER 1006
Query: 603 EEGELSPNGDFVEEIFVAFG--GSHPLRNAKKSAETMPYQARTGENTSCQXXXXXXXXXX 430
EEGELSPNGDF E+ F A+G GS + AK++A YQ R GE +C
Sbjct: 1007 EEGELSPNGDFEEDNFAAYGEAGSEAVHKAKENAVNRQYQTRHGEEETCGEAGGENDADA 1066
Query: 429 XXXXXXXXXXAGED---------VSGSESAAXXXXXXXXXXXXXXXXXXXDGKAESECED 277
+ ED VSGSES D KAESE E
Sbjct: 1067 DDEGDESAHRSSEDSENASENGEVSGSES-GDGEDCSREEHEEAGEHDEHDNKAESEGEA 1125
Query: 276 EGLDDTL-AGGVGLSLPPSE 220
EG+ D G G LP SE
Sbjct: 1126 EGMADAHDVEGEGTMLPFSE 1145
Score = 65.9 bits (159), Expect(2) = 2e-28
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 127 VFYGNDSFYVLFRLHQILYERLLSAKQHSSTAEMKWRNVKD 5
VFYGNDSFYVLFRLHQ LYER+ SAK +SS+AE KWR D
Sbjct: 1171 VFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWRASND 1211
>ref|XP_003618393.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
gi|355493408|gb|AES74611.1| Paired amphipathic helix
protein Sin3 [Medicago truncatula]
Length = 1404
Score = 82.4 bits (202), Expect(2) = 2e-27
Identities = 66/172 (38%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Frame = -1
Query: 729 DVHLLEHHDVSRSIPLTNGVFTKGPNVPKCNEDSVYPSKIEKEEGELSPNGDFVEEIFVA 550
+V L+E + +P+ NGV + V K NE+S P K+EKEEGELSPN D E+ FVA
Sbjct: 922 NVPLVEGVAAAPPVPVANGVLVENSKV-KSNEESSVPCKVEKEEGELSPNADSEEDNFVA 980
Query: 549 FGGSHPLRNAKKSAETMPYQARTGENTSCQXXXXXXXXXXXXXXXXXXXXAGEDVSGSES 370
+G S+ N ++ + Y++R GE+ AGEDVSGSES
Sbjct: 981 YGDSNAQSN--QNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSES 1038
Query: 369 AAXXXXXXXXXXXXXXXXXXXDGKAESECEDEGLDDTLA--GGVGLSLPPSE 220
A DGKAESE E EG+ D A G G SLP SE
Sbjct: 1039 AG-DECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSE 1089
Score = 66.6 bits (161), Expect(2) = 2e-27
Identities = 28/37 (75%), Positives = 36/37 (97%)
Frame = -3
Query: 127 VFYGNDSFYVLFRLHQILYERLLSAKQHSSTAEMKWR 17
VFYGND F+VLFRLHQILYER+LSAK++S++AE+KW+
Sbjct: 1116 VFYGNDDFFVLFRLHQILYERILSAKENSTSAEIKWK 1152