BLASTX nr result

ID: Panax21_contig00002912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002912
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528895.1| transcription factor, putative [Ricinus comm...   202   6e-50
gb|ADL36578.1| ARF domain class transcription factor [Malus x do...   199   8e-49
ref|XP_004143431.1| PREDICTED: auxin-responsive protein IAA9-lik...   165   1e-38
gb|AAM12952.1| auxin-regulated protein [Zinnia violacea]              148   1e-33
ref|XP_003628839.1| Indoleacetic acid-induced-like protein [Medi...   148   1e-33

>ref|XP_002528895.1| transcription factor, putative [Ricinus communis]
           gi|223531649|gb|EEF33475.1| transcription factor,
           putative [Ricinus communis]
          Length = 382

 Score =  202 bits (515), Expect = 6e-50
 Identities = 107/178 (60%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = -2

Query: 546 PLLGVEGVGQGNASLVASQVSMDFVSPTGLGLKERNYLGLXXXXXXXXXXXXXXXXXXXS 367
           PLLGVE  GQ   SLVAS  S+D +S  G  LKERNYLGL                   +
Sbjct: 4   PLLGVEDGGQSKVSLVASSPSVDCISQNGCRLKERNYLGLSDCSSVDSSAVPSLSEENNN 63

Query: 366 NLNLKATELRLGLPGSQSPERDPKFNLLVLGKLDEKPLFPLIPSKDG--ICCLSQKTVVS 193
           NLNLKATELRLGLPGS SPERD + +LL+ GKLDEKPLFPL+P KDG  IC L QK VVS
Sbjct: 64  NLNLKATELRLGLPGSLSPERDTEVSLLISGKLDEKPLFPLLPLKDGHGICSLPQKHVVS 123

Query: 192 GNKRGFSDTMDGFSEIKGPSFTEGNWMFNTPISDSETPKPVGHGKFLGNASINVMLSS 19
           GNKRGFSDTMDGFSE+KG +++E NW+F++  ++S++P+ VG GKF G + IN MLSS
Sbjct: 124 GNKRGFSDTMDGFSEVKGSAYSEKNWLFHSAGTESDSPQSVGQGKFSGASGINTMLSS 181


>gb|ADL36578.1| ARF domain class transcription factor [Malus x domestica]
          Length = 373

 Score =  199 bits (505), Expect = 8e-49
 Identities = 109/176 (61%), Positives = 123/176 (69%)
 Frame = -2

Query: 546 PLLGVEGVGQGNASLVASQVSMDFVSPTGLGLKERNYLGLXXXXXXXXXXXXXXXXXXXS 367
           PLLG E  GQ N S+VA   SMD +S    GLKERNYLGL                   +
Sbjct: 4   PLLGGEEEGQSNGSMVAFSRSMDCISQNSSGLKERNYLGLSDCSSVDSSTVSNLSEGTKN 63

Query: 366 NLNLKATELRLGLPGSQSPERDPKFNLLVLGKLDEKPLFPLIPSKDGICCLSQKTVVSGN 187
           NLN KATELRLGLPGSQSPER+P   LL  GKLDEKPLFPL+PSKDGIC  SQK   +GN
Sbjct: 64  NLNFKATELRLGLPGSQSPEREPDLCLLNSGKLDEKPLFPLLPSKDGICSSSQK---NGN 120

Query: 186 KRGFSDTMDGFSEIKGPSFTEGNWMFNTPISDSETPKPVGHGKFLGNASINVMLSS 19
           KRGF+DTMDGFSE+K  ++TEGNWMF+   SDSE+P+ VG GKF  N SINV+LSS
Sbjct: 121 KRGFADTMDGFSEVKSNAYTEGNWMFHAAGSDSESPESVGQGKFPVN-SINVLLSS 175


>ref|XP_004143431.1| PREDICTED: auxin-responsive protein IAA9-like [Cucumis sativus]
           gi|449499818|ref|XP_004160925.1| PREDICTED:
           auxin-responsive protein IAA9-like [Cucumis sativus]
          Length = 380

 Score =  165 bits (417), Expect = 1e-38
 Identities = 92/182 (50%), Positives = 110/182 (60%)
 Frame = -2

Query: 546 PLLGVEGVGQGNASLVASQVSMDFVSPTGLGLKERNYLGLXXXXXXXXXXXXXXXXXXXS 367
           PLL       GN  +VA+  SMD  S  G   +ERNYL L                   S
Sbjct: 4   PLLNSVEEALGNVPVVAASPSMDCHSQNGTKFRERNYLRLSPCSSVDSSAVSNLSEENKS 63

Query: 366 NLNLKATELRLGLPGSQSPERDPKFNLLVLGKLDEKPLFPLIPSKDGICCLSQKTVVSGN 187
           NLNLKATELRLGLPGS SPERD +F L+   + DEK L  L+PS DG     QK +VSG+
Sbjct: 64  NLNLKATELRLGLPGSLSPERDQEFTLISSVEPDEKTLLQLLPSTDGYSVSLQKNIVSGS 123

Query: 186 KRGFSDTMDGFSEIKGPSFTEGNWMFNTPISDSETPKPVGHGKFLGNASINVMLSSGSAV 7
           KR FSDTM+G+SE+KGP +TE NWMF+   SD E+P PV  GKF  N+ IN MLSS ++ 
Sbjct: 124 KRVFSDTMEGYSEVKGPLYTERNWMFHAASSDPESPYPVSQGKFHANSGINAMLSSRASG 183

Query: 6   TH 1
            H
Sbjct: 184 PH 185


>gb|AAM12952.1| auxin-regulated protein [Zinnia violacea]
          Length = 351

 Score =  148 bits (374), Expect = 1e-33
 Identities = 84/155 (54%), Positives = 95/155 (61%)
 Frame = -2

Query: 546 PLLGVEGVGQGNASLVASQVSMDFVSPTGLGLKERNYLGLXXXXXXXXXXXXXXXXXXXS 367
           PLLGVEG G GN SL+ S  +M+ +      L ERNYLGL                   +
Sbjct: 4   PLLGVEGDGLGNVSLMTSASTMESIFQKNAELTERNYLGLSDCSSFDSTAVSGISEVKRN 63

Query: 366 NLNLKATELRLGLPGSQSPERDPKFNLLVLGKLDEKPLFPLIPSKDGICCLSQKTVVSGN 187
           NLNLKATELRLGLPGSQSPERD   +L+    LDEKPLFPL+PSKDGIC  SQK  VSGN
Sbjct: 64  NLNLKATELRLGLPGSQSPERDVDVDLVNSESLDEKPLFPLLPSKDGICSNSQKVFVSGN 123

Query: 186 KRGFSDTMDGFSEIKGPSFTEGNWMFNTPISDSET 82
           KRGFSD +D           EG WMF +  +DSET
Sbjct: 124 KRGFSDAID-----------EGKWMFGSSGTDSET 147


>ref|XP_003628839.1| Indoleacetic acid-induced-like protein [Medicago truncatula]
           gi|355522861|gb|AET03315.1| Indoleacetic
           acid-induced-like protein [Medicago truncatula]
          Length = 356

 Score =  148 bits (374), Expect = 1e-33
 Identities = 94/173 (54%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
 Frame = -2

Query: 561 WCLMSP-LLGVEGVGQGNASLVASQV--SMDFVSPTGLGLKERNYLGLXXXXXXXXXXXX 391
           W LMSP LL  E  GQ N S VAS    S+D  S T  GLKERNYLGL            
Sbjct: 6   WNLMSPPLLLPEEEGQSNPSTVASASPQSLDRFSQTAAGLKERNYLGLSDCSSVDSSTVP 65

Query: 390 XXXXXXXSNLNLKATELRLGLPGSQSPERDPKFNLLVLGKLDEKPLFPLIPSKDGICCLS 211
                   NLNLKATELRLGLPGSQSPERD     L   KLDEKPLFPL+P+KDGIC LS
Sbjct: 66  SLSDEKKENLNLKATELRLGLPGSQSPERDLDLFPLNSTKLDEKPLFPLLPTKDGICSLS 125

Query: 210 QKTVVSGNKRGFSDTMDGFSEIKGPSFTEGNWMFN------TPISDSETPKPV 70
           QKTVVSGNKRGF+DT++ F E K  + T  N + +       P +  E PK V
Sbjct: 126 QKTVVSGNKRGFADTLEVFPEAKYTANTRVNILLSPRPSGAQPTTIKEMPKKV 178


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