BLASTX nr result
ID: Panax21_contig00002529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00002529 (1166 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing fac... 355 2e-95 ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing fac... 338 2e-90 gb|AFK35075.1| unknown [Lotus japonicus] 336 6e-90 ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing fac... 334 3e-89 ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|2... 332 1e-88 >ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis vinifera] Length = 252 Score = 355 bits (910), Expect = 2e-95 Identities = 177/239 (74%), Positives = 198/239 (82%), Gaps = 2/239 (0%) Frame = +1 Query: 76 MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255 MKPIFCGNLEYDAR ++ERLFRRYGKVDRVD+KSGFAFVYM+DE+DAE AIRRLDRT F Sbjct: 1 MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTVF 60 Query: 256 GRKGRRLRVEWTKQERGIRRPDSS-KRSANTKPTKTLFVINFDPVHTRERDLERHFDPHG 432 GRKGR+LRVEWTKQERGIRRP S K SAN KP+KTLFVINFDP+HTR RDLERHFD +G Sbjct: 61 GRKGRQLRVEWTKQERGIRRPGGSRKSSANMKPSKTLFVINFDPIHTRTRDLERHFDLYG 120 Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIR-DDDDRRNGHSPER 609 K+LNIRIRRNFAFIQF S+ED+T+AL+ATNMSKF+DR+ISVEYA R DDDDRRNG+SPER Sbjct: 121 KILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVISVEYAARDDDDDRRNGYSPER 180 Query: 610 RVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786 R RD SPD+R + G GHG+ NSR E RGSP+YD ESP NERY Sbjct: 181 RGRDMSPDRRSHDRGRSPSPYHRDRASPDYGHGANANSRSEPRGSPNYDRDESPVNERY 239 >ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine max] Length = 252 Score = 338 bits (866), Expect = 2e-90 Identities = 173/241 (71%), Positives = 197/241 (81%), Gaps = 4/241 (1%) Frame = +1 Query: 76 MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255 MKP+FCGNL++DAR ++ERLFRRYGKVDRVD+KSGFAFVYMEDE+DAE AIRRLDRTEF Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60 Query: 256 GRKGRRLRVEWTKQERGIRRP--DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPH 429 GRKGRR+RVEWTKQER RR DS K S+N++P+KTLFVINFDPV+ R RDLERHFD + Sbjct: 61 GRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDSY 120 Query: 430 GKVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDD--DRRNGHSP 603 GK+LNIRIRRNFAFIQF S+ED+TRALEATN+SKF+DR+I+VEYAIRDDD DRRNG+SP Sbjct: 121 GKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSP 180 Query: 604 ERRVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANER 783 +RR D SPD R YG G GHGS P+SR E RGSP YD AESP N R Sbjct: 181 DRRGHD-SPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGR 238 Query: 784 Y 786 Y Sbjct: 239 Y 239 >gb|AFK35075.1| unknown [Lotus japonicus] Length = 249 Score = 336 bits (862), Expect = 6e-90 Identities = 170/238 (71%), Positives = 194/238 (81%), Gaps = 1/238 (0%) Frame = +1 Query: 76 MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255 MKP+FCGNL++DAR ++ERLFRRYGKV+RVD+KSGFAFVYMEDE+DAE AIRRLDRTEF Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60 Query: 256 GRKGRRLRVEWTKQERGIRRP-DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPHG 432 GRKGRR+RVEWTKQER RR DS K ++N KP+KTLF+INFDPVHTR RDLERHFDP+G Sbjct: 61 GRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYG 120 Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDDDRRNGHSPERR 612 K+ NIRIRRNFAFIQ+ S ED+TRALEATN+SKF+DR+I+VEYAIRDDDDRR+G SP+RR Sbjct: 121 KISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAIRDDDDRRDGQSPDRR 180 Query: 613 VRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786 R SPD R YG G GHGS P SR E RGSP Y+ AESP N RY Sbjct: 181 GR-VSPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPASRPEPRGSPKYERAESPQNGRY 236 >ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine max] Length = 253 Score = 334 bits (856), Expect = 3e-89 Identities = 170/238 (71%), Positives = 195/238 (81%), Gaps = 4/238 (1%) Frame = +1 Query: 76 MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255 MKP+FCGNL++DAR ++ERLFRRYGKVDRVD+KSGFAFVYMEDE+DAE AIRRLDRTEF Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60 Query: 256 GRKGRRLRVEWTKQERGIRRP--DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPH 429 GRKGRR+RVEWTKQER RR DS K S+N++P+KTLFVINFDPVH R RDLERHFD + Sbjct: 61 GRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVHARTRDLERHFDSY 120 Query: 430 GKVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDD--DRRNGHSP 603 GK+LNIRIRRNFAFIQF S+ED+TRALEATN+SKF+DR+I+VEYAIRDDD DRRNG+SP Sbjct: 121 GKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSP 180 Query: 604 ERRVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPAN 777 +RR D SPD R YG G GHGS P+SR + RGSP Y+ AESP N Sbjct: 181 DRRGHD-SPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPSSRPDPRGSPKYERAESPIN 236 >ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|222861537|gb|EEE99079.1| predicted protein [Populus trichocarpa] Length = 262 Score = 332 bits (850), Expect = 1e-88 Identities = 169/238 (71%), Positives = 192/238 (80%), Gaps = 1/238 (0%) Frame = +1 Query: 76 MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255 MK IFCGNL+YDAR +LERLFRRYG++DRVD+KSGFAFVYMEDE+DAE AIRRLDR EF Sbjct: 1 MKAIFCGNLDYDARQSDLERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDRAEF 60 Query: 256 GRKGRRLRVEWTKQERGIRRPDSSKRSA-NTKPTKTLFVINFDPVHTRERDLERHFDPHG 432 GRKGRRLRVEWTKQER RRP S+RS+ NT P+KTLFVINFDPVHTR RDLERHFDPHG Sbjct: 61 GRKGRRLRVEWTKQERESRRPAGSRRSSTNTTPSKTLFVINFDPVHTRTRDLERHFDPHG 120 Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDDDRRNGHSPERR 612 K+L+ RIRRNFAF+Q+ +ED+T+ALEAT+MSKF+DR+ISVEYA R DD+RRNG+SPERR Sbjct: 121 KILSTRIRRNFAFVQYELQEDATKALEATDMSKFMDRVISVEYAAR-DDERRNGYSPERR 179 Query: 613 VRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786 RD SPD R Y GH SK NSR E RG+ +YD AESP NERY Sbjct: 180 DRDRSPD-RNYNRERSPSPDRRDRGSPDYGHRSKTNSRPEPRGNHNYDKAESPENERY 236