BLASTX nr result

ID: Panax21_contig00002529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002529
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing fac...   355   2e-95
ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing fac...   338   2e-90
gb|AFK35075.1| unknown [Lotus japonicus]                              336   6e-90
ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing fac...   334   3e-89
ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88

>ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 252

 Score =  355 bits (910), Expect = 2e-95
 Identities = 177/239 (74%), Positives = 198/239 (82%), Gaps = 2/239 (0%)
 Frame = +1

Query: 76  MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255
           MKPIFCGNLEYDAR  ++ERLFRRYGKVDRVD+KSGFAFVYM+DE+DAE AIRRLDRT F
Sbjct: 1   MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTVF 60

Query: 256 GRKGRRLRVEWTKQERGIRRPDSS-KRSANTKPTKTLFVINFDPVHTRERDLERHFDPHG 432
           GRKGR+LRVEWTKQERGIRRP  S K SAN KP+KTLFVINFDP+HTR RDLERHFD +G
Sbjct: 61  GRKGRQLRVEWTKQERGIRRPGGSRKSSANMKPSKTLFVINFDPIHTRTRDLERHFDLYG 120

Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIR-DDDDRRNGHSPER 609
           K+LNIRIRRNFAFIQF S+ED+T+AL+ATNMSKF+DR+ISVEYA R DDDDRRNG+SPER
Sbjct: 121 KILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVISVEYAARDDDDDRRNGYSPER 180

Query: 610 RVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786
           R RD SPD+R +  G               GHG+  NSR E RGSP+YD  ESP NERY
Sbjct: 181 RGRDMSPDRRSHDRGRSPSPYHRDRASPDYGHGANANSRSEPRGSPNYDRDESPVNERY 239


>ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 252

 Score =  338 bits (866), Expect = 2e-90
 Identities = 173/241 (71%), Positives = 197/241 (81%), Gaps = 4/241 (1%)
 Frame = +1

Query: 76  MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255
           MKP+FCGNL++DAR  ++ERLFRRYGKVDRVD+KSGFAFVYMEDE+DAE AIRRLDRTEF
Sbjct: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60

Query: 256 GRKGRRLRVEWTKQERGIRRP--DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPH 429
           GRKGRR+RVEWTKQER  RR   DS K S+N++P+KTLFVINFDPV+ R RDLERHFD +
Sbjct: 61  GRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDSY 120

Query: 430 GKVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDD--DRRNGHSP 603
           GK+LNIRIRRNFAFIQF S+ED+TRALEATN+SKF+DR+I+VEYAIRDDD  DRRNG+SP
Sbjct: 121 GKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSP 180

Query: 604 ERRVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANER 783
           +RR  D SPD R YG G               GHGS P+SR E RGSP YD AESP N R
Sbjct: 181 DRRGHD-SPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGR 238

Query: 784 Y 786
           Y
Sbjct: 239 Y 239


>gb|AFK35075.1| unknown [Lotus japonicus]
          Length = 249

 Score =  336 bits (862), Expect = 6e-90
 Identities = 170/238 (71%), Positives = 194/238 (81%), Gaps = 1/238 (0%)
 Frame = +1

Query: 76  MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255
           MKP+FCGNL++DAR  ++ERLFRRYGKV+RVD+KSGFAFVYMEDE+DAE AIRRLDRTEF
Sbjct: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60

Query: 256 GRKGRRLRVEWTKQERGIRRP-DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPHG 432
           GRKGRR+RVEWTKQER  RR  DS K ++N KP+KTLF+INFDPVHTR RDLERHFDP+G
Sbjct: 61  GRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYG 120

Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDDDRRNGHSPERR 612
           K+ NIRIRRNFAFIQ+ S ED+TRALEATN+SKF+DR+I+VEYAIRDDDDRR+G SP+RR
Sbjct: 121 KISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAIRDDDDRRDGQSPDRR 180

Query: 613 VRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786
            R  SPD R YG G               GHGS P SR E RGSP Y+ AESP N RY
Sbjct: 181 GR-VSPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPASRPEPRGSPKYERAESPQNGRY 236


>ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 253

 Score =  334 bits (856), Expect = 3e-89
 Identities = 170/238 (71%), Positives = 195/238 (81%), Gaps = 4/238 (1%)
 Frame = +1

Query: 76  MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255
           MKP+FCGNL++DAR  ++ERLFRRYGKVDRVD+KSGFAFVYMEDE+DAE AIRRLDRTEF
Sbjct: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60

Query: 256 GRKGRRLRVEWTKQERGIRRP--DSSKRSANTKPTKTLFVINFDPVHTRERDLERHFDPH 429
           GRKGRR+RVEWTKQER  RR   DS K S+N++P+KTLFVINFDPVH R RDLERHFD +
Sbjct: 61  GRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVHARTRDLERHFDSY 120

Query: 430 GKVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDD--DRRNGHSP 603
           GK+LNIRIRRNFAFIQF S+ED+TRALEATN+SKF+DR+I+VEYAIRDDD  DRRNG+SP
Sbjct: 121 GKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSP 180

Query: 604 ERRVRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPAN 777
           +RR  D SPD R YG G               GHGS P+SR + RGSP Y+ AESP N
Sbjct: 181 DRRGHD-SPDGR-YGRGRSPSPYRRGRGSPDYGHGSNPSSRPDPRGSPKYERAESPIN 236


>ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|222861537|gb|EEE99079.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  332 bits (850), Expect = 1e-88
 Identities = 169/238 (71%), Positives = 192/238 (80%), Gaps = 1/238 (0%)
 Frame = +1

Query: 76  MKPIFCGNLEYDARPLELERLFRRYGKVDRVDVKSGFAFVYMEDEQDAEAAIRRLDRTEF 255
           MK IFCGNL+YDAR  +LERLFRRYG++DRVD+KSGFAFVYMEDE+DAE AIRRLDR EF
Sbjct: 1   MKAIFCGNLDYDARQSDLERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDRAEF 60

Query: 256 GRKGRRLRVEWTKQERGIRRPDSSKRSA-NTKPTKTLFVINFDPVHTRERDLERHFDPHG 432
           GRKGRRLRVEWTKQER  RRP  S+RS+ NT P+KTLFVINFDPVHTR RDLERHFDPHG
Sbjct: 61  GRKGRRLRVEWTKQERESRRPAGSRRSSTNTTPSKTLFVINFDPVHTRTRDLERHFDPHG 120

Query: 433 KVLNIRIRRNFAFIQFASEEDSTRALEATNMSKFLDRIISVEYAIRDDDDRRNGHSPERR 612
           K+L+ RIRRNFAF+Q+  +ED+T+ALEAT+MSKF+DR+ISVEYA R DD+RRNG+SPERR
Sbjct: 121 KILSTRIRRNFAFVQYELQEDATKALEATDMSKFMDRVISVEYAAR-DDERRNGYSPERR 179

Query: 613 VRDFSPDKRGYGHGXXXXXXXXXXXXXXXGHGSKPNSRLERRGSPDYDGAESPANERY 786
            RD SPD R Y                  GH SK NSR E RG+ +YD AESP NERY
Sbjct: 180 DRDRSPD-RNYNRERSPSPDRRDRGSPDYGHRSKTNSRPEPRGNHNYDKAESPENERY 236


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