BLASTX nr result

ID: Panax21_contig00002466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002466
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN87702.1| clathrin heavy chain 1, partial [Nicotiana tabacum]    131   2e-28
ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   125   7e-27
gb|AFN87703.1| clathrin heavy chain 2, partial [Nicotiana tabacum]    125   9e-27
sp|Q2QYW2.1|CLH2_ORYSJ RecName: Full=Clathrin heavy chain 2 gi|7...   124   1e-26
sp|Q2RBN7.1|CLH1_ORYSJ RecName: Full=Clathrin heavy chain 1 gi|7...   124   1e-26

>gb|AFN87702.1| clathrin heavy chain 1, partial [Nicotiana tabacum]
          Length = 404

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/82 (81%), Positives = 68/82 (82%)
 Frame = -3

Query: 721 RADVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAANEMKAKEREEKDVIKQ 542
           R DVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEA NE KAKE EEKDV+KQ
Sbjct: 291 RPDVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAQNEAKAKENEEKDVMKQ 350

Query: 541 QNMYAQXXXXXXXXXPGMGGYG 476
           QNMYAQ         PGMGG G
Sbjct: 351 QNMYAQLLPLALPAPPGMGGAG 372


>ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  125 bits (315), Expect = 7e-27
 Identities = 63/85 (74%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
 Frame = -3

Query: 721  RADVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAANEMKAKEREEKDVIKQ 542
            RAD+ LELAWM+NMIDFAFPYLLQFIREYTGKVDEL+KDKIEA NE+KAKE+EEKDV+ Q
Sbjct: 1592 RADIVLELAWMHNMIDFAFPYLLQFIREYTGKVDELVKDKIEAQNEVKAKEQEEKDVVAQ 1651

Query: 541  QNMYAQ--XXXXXXXXXPGMGGYGP 473
            QNMYAQ           PGMGG+ P
Sbjct: 1652 QNMYAQLLPLALPAPPMPGMGGFAP 1676


>gb|AFN87703.1| clathrin heavy chain 2, partial [Nicotiana tabacum]
          Length = 404

 Score =  125 bits (314), Expect = 9e-27
 Identities = 67/84 (79%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = -3

Query: 721 RADVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAANEMKAKEREEKDVIKQ 542
           R DVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEA +E KAKE EEKDVIKQ
Sbjct: 291 RPDVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAQSEAKAKENEEKDVIKQ 350

Query: 541 QNMYAQ--XXXXXXXXXPGMGGYG 476
           QNMYAQ           PGMGG G
Sbjct: 351 QNMYAQLLPLALPAPPMPGMGGAG 374


>sp|Q2QYW2.1|CLH2_ORYSJ RecName: Full=Clathrin heavy chain 2 gi|77552802|gb|ABA95598.1|
            Clathrin heavy chain, putative, expressed [Oryza sativa
            Japonica Group]
          Length = 1708

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = -3

Query: 721  RADVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAANEMKAKEREEKDVIKQ 542
            RADVALELAWMNNM+DFAFPYLLQFIREYT KVDEL+KD+IE+ NE++AKE+EEKD++ Q
Sbjct: 1592 RADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKDRIESQNEVRAKEKEEKDLVAQ 1651

Query: 541  QNMYAQXXXXXXXXXPGMGGYGP 473
            QNMYAQ         PGMGG  P
Sbjct: 1652 QNMYAQLLPLALPAPPGMGGPPP 1674


>sp|Q2RBN7.1|CLH1_ORYSJ RecName: Full=Clathrin heavy chain 1 gi|77548264|gb|ABA91061.1|
            Clathrin heavy chain, putative, expressed [Oryza sativa
            Japonica Group]
          Length = 1708

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = -3

Query: 721  RADVALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAANEMKAKEREEKDVIKQ 542
            RADVALELAWMNNM+DFAFPYLLQFIREYT KVDEL+KD+IE+ NE++AKE+EEKD++ Q
Sbjct: 1592 RADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKDRIESQNEVRAKEKEEKDLVAQ 1651

Query: 541  QNMYAQXXXXXXXXXPGMGGYGP 473
            QNMYAQ         PGMGG  P
Sbjct: 1652 QNMYAQLLPLALPAPPGMGGPPP 1674


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