BLASTX nr result

ID: Panax21_contig00002000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002000
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin...   341   8e-92
emb|CBI16011.3| unnamed protein product [Vitis vinifera]              340   1e-91
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin...   340   1e-91
gb|AEZ00895.1| putative zinc finger CCCH-type family protein, pa...   338   4e-91
gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [...   337   2e-90

>ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
           [Cucumis sativus] gi|449525922|ref|XP_004169965.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           40-like [Cucumis sativus]
          Length = 517

 Score =  341 bits (874), Expect = 8e-92
 Identities = 158/165 (95%), Positives = 163/165 (98%)
 Frame = +2

Query: 161 MAHRLLRDVEADGWERSDFPIICESCLGDNPYLRMTIADYDKECKICTRPFTVFRWRPGR 340
           MAHRLLRD+EADGWERSDFPIICESCLGDNPY+RMT ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 341 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 520
           DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IPKSDVNREYFAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120

Query: 521 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 655
           EHDR+ARAG+DYESSYGK RPNDTILKLQRTTPYYKRNRAHVCSF
Sbjct: 121 EHDRKARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSF 165


>emb|CBI16011.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  340 bits (872), Expect = 1e-91
 Identities = 157/165 (95%), Positives = 164/165 (99%)
 Frame = +2

Query: 161 MAHRLLRDVEADGWERSDFPIICESCLGDNPYLRMTIADYDKECKICTRPFTVFRWRPGR 340
           MAHRLLRD+EADGWERSDFPIICESCLGDNPY+RMT ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 341 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 520
           DAR+KKTE+CQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IPKSDVNREYFAE
Sbjct: 61  DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120

Query: 521 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 655
           EHDRRARAG+DYESS+GKVRPNDTILKLQRTTPYYKRNRAHVCSF
Sbjct: 121 EHDRRARAGIDYESSFGKVRPNDTILKLQRTTPYYKRNRAHVCSF 165


>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 474

 Score =  340 bits (872), Expect = 1e-91
 Identities = 157/165 (95%), Positives = 164/165 (99%)
 Frame = +2

Query: 161 MAHRLLRDVEADGWERSDFPIICESCLGDNPYLRMTIADYDKECKICTRPFTVFRWRPGR 340
           MAHRLLRD+EADGWERSDFPIICESCLGDNPY+RMT ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 341 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 520
           DAR+KKTE+CQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IPKSDVNREYFAE
Sbjct: 61  DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120

Query: 521 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 655
           EHDRRARAG+DYESS+GKVRPNDTILKLQRTTPYYKRNRAHVCSF
Sbjct: 121 EHDRRARAGIDYESSFGKVRPNDTILKLQRTTPYYKRNRAHVCSF 165


>gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
           guineensis]
          Length = 307

 Score =  338 bits (868), Expect = 4e-91
 Identities = 156/165 (94%), Positives = 162/165 (98%)
 Frame = +2

Query: 161 MAHRLLRDVEADGWERSDFPIICESCLGDNPYLRMTIADYDKECKICTRPFTVFRWRPGR 340
           MAHRLLRD +ADGWERSDFPIICESCLGDNPY+RMT ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR 60

Query: 341 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 520
           DARYKKTE+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IPKSDVNREYFAE
Sbjct: 61  DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAE 120

Query: 521 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 655
           EHDRRARAG+DYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF
Sbjct: 121 EHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 165


>gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 487

 Score =  337 bits (863), Expect = 2e-90
 Identities = 157/165 (95%), Positives = 162/165 (98%)
 Frame = +2

Query: 161 MAHRLLRDVEADGWERSDFPIICESCLGDNPYLRMTIADYDKECKICTRPFTVFRWRPGR 340
           MAHRLLRD EADGWERSDFPIICESCLGD+PY+RMT ADYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60

Query: 341 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 520
           DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IPKSDVNREYFAE
Sbjct: 61  DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120

Query: 521 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSF 655
           EHDRRARAG+DYESSYGKVR NDTILKLQRTTPYYKRNRAHVCSF
Sbjct: 121 EHDRRARAGIDYESSYGKVRANDTILKLQRTTPYYKRNRAHVCSF 165


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