BLASTX nr result

ID: Panax21_contig00001730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001730
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   219   1e-55
ref|XP_002519396.1| conserved hypothetical protein [Ricinus comm...   216   2e-54
ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800...   209   2e-52
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52

>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
           vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
           product [Vitis vinifera]
          Length = 320

 Score =  219 bits (559), Expect = 1e-55
 Identities = 102/136 (75%), Positives = 113/136 (83%)
 Frame = -1

Query: 408 AIILCFITLIALLIFLKWGMPFLFEKVLVPILQWEATAFGRPXXXXXXXXXXXXXXXXLI 229
           A+I C + +I LL+FLKWG PF+FEK+L+PI+ WEATAFGRP                LI
Sbjct: 59  ALIFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLI 118

Query: 228 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRDRIHQWLKRWPQKAAMIRL 49
           PSGPSMWLAGMIFGYGLGFVIIM+GTTIGM+LPY+IGLLFRDRIHQWLKRWPQKAAMIRL
Sbjct: 119 PSGPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRL 178

Query: 48  AGEGSWLHQFRVVALF 1
           AGEGSW HQFRVVALF
Sbjct: 179 AGEGSWFHQFRVVALF 194


>ref|XP_002519396.1| conserved hypothetical protein [Ricinus communis]
           gi|223541463|gb|EEF43013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 327

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/136 (75%), Positives = 111/136 (81%)
 Frame = -1

Query: 408 AIILCFITLIALLIFLKWGMPFLFEKVLVPILQWEATAFGRPXXXXXXXXXXXXXXXXLI 229
           A+   F+ ++ LL F KWG+PFLF+KVL PILQWEATAFGRP                LI
Sbjct: 63  ALAFSFLVILLLLAFFKWGLPFLFQKVLFPILQWEATAFGRPVLALVLIASLAVFPIFLI 122

Query: 228 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRDRIHQWLKRWPQKAAMIRL 49
           PSGPSMWLAGMIFGYG+GFVIIMVGTTIGMILPY+IGLLFRDRIHQWLKRWPQKAAMIRL
Sbjct: 123 PSGPSMWLAGMIFGYGMGFVIIMVGTTIGMILPYLIGLLFRDRIHQWLKRWPQKAAMIRL 182

Query: 48  AGEGSWLHQFRVVALF 1
           AGEGSW HQFRVVALF
Sbjct: 183 AGEGSWFHQFRVVALF 198


>ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|222845180|gb|EEE82727.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  210 bits (535), Expect = 8e-53
 Identities = 97/136 (71%), Positives = 113/136 (83%)
 Frame = -1

Query: 408 AIILCFITLIALLIFLKWGMPFLFEKVLVPILQWEATAFGRPXXXXXXXXXXXXXXXXLI 229
           A+I C +  I LL+F+KWG+PFLFEKVL+P+++WEATAFGRP                LI
Sbjct: 59  ALIWCLVITILLLVFVKWGVPFLFEKVLLPMMEWEATAFGRPVLALVLTASLALFPVFLI 118

Query: 228 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRDRIHQWLKRWPQKAAMIRL 49
           PSGPSMWLAGMIFGYG+GFVIIMVGTTIGM+LPY+IGL+FR+RIHQWLKRWPQKA+MI L
Sbjct: 119 PSGPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRERIHQWLKRWPQKASMIGL 178

Query: 48  AGEGSWLHQFRVVALF 1
           AGEGSW HQF+VVALF
Sbjct: 179 AGEGSWFHQFKVVALF 194


>ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800730 [Glycine max]
          Length = 312

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/136 (70%), Positives = 110/136 (80%)
 Frame = -1

Query: 408 AIILCFITLIALLIFLKWGMPFLFEKVLVPILQWEATAFGRPXXXXXXXXXXXXXXXXLI 229
           A++ CF+ ++  L+ LKWG+PF FEKVL PI++WEATAFGRP                 I
Sbjct: 60  ALLWCFVIVVLGLVILKWGVPFTFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFFI 119

Query: 228 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRDRIHQWLKRWPQKAAMIRL 49
           PSGPSMWLAGMIFGYGLGFVIIMVGTTIGM+LPY+IGL+FRDRIHQWLKRWP+ AAMIRL
Sbjct: 120 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRL 179

Query: 48  AGEGSWLHQFRVVALF 1
           AGEGSW HQF+VVALF
Sbjct: 180 AGEGSWFHQFQVVALF 195


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  207 bits (528), Expect = 5e-52
 Identities = 95/136 (69%), Positives = 112/136 (82%)
 Frame = -1

Query: 408 AIILCFITLIALLIFLKWGMPFLFEKVLVPILQWEATAFGRPXXXXXXXXXXXXXXXXLI 229
           A+I C +    +L+FLKWG+ FLF+KVL+P+++WEATAFGRP                LI
Sbjct: 59  ALIWCLVIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLI 118

Query: 228 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRDRIHQWLKRWPQKAAMIRL 49
           PSGPSMWLAGMIFGYG+GFVIIMVGTTIGM+LPY+IGL+FRDRIHQWLKRWPQKA+MIRL
Sbjct: 119 PSGPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRL 178

Query: 48  AGEGSWLHQFRVVALF 1
           AGEGSW HQF+VVA+F
Sbjct: 179 AGEGSWFHQFKVVAIF 194


Top