BLASTX nr result

ID: Panax21_contig00001246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001246
         (4718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 ...   493   e-136
ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|2...   466   e-128
dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]                        465   e-128
ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|2...   464   e-127
ref|XP_004152815.1| PREDICTED: peroxisome biogenesis protein 12-...   457   e-125

>ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 [Vitis vinifera]
            gi|302143588|emb|CBI22341.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  493 bits (1269), Expect = e-136
 Identities = 244/327 (74%), Positives = 265/327 (81%)
 Frame = -2

Query: 1255 SFAPPDASFSESLYGLRRRAVNIKMKKGNNRSEAGDRIHQSGLEKHQKVLSVVFLVVLPY 1076
            S    DASFSESLYGLRRRAV I++KK N  S++ D IH SGLEK+QK LSV+FLVVLPY
Sbjct: 67   SLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLFLVVLPY 126

Query: 1075 FKSKLHTIYNKEREATLQASLWGHGDDRFXXXXXXXXXXXSFVSTSGSDMEVSARTRFTK 896
            FKSKLH++YNKEREATLQASLWGHGD+RF           S + T  SD+EVS R R TK
Sbjct: 127  FKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSVRARLTK 186

Query: 895  RIQKIVGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQELMDTXX 716
            R QK +G+ YPW+HAGNEGL+FAYQLLYLLDATGFYS GLHALG+HVCRATGQELMDT  
Sbjct: 187  RFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTSS 246

Query: 715  XXXXXXXXXXXXXRGPPWLKALQGALLSCSYAVLDYAQTGLIAAVFFFKMMEWWYQSAEE 536
                         RGPPWLKALQGALLSC+Y +LDYAQTGLIAAVFFFKMMEWWYQSAEE
Sbjct: 247  RISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIAAVFFFKMMEWWYQSAEE 306

Query: 535  RMSAPTVYXXXXXXXXPKVAKEGIPLPADRTVCPLCSQKRANPSVVTVSGFVFCYACIFK 356
            RMSAPTVY        PKVAKEGIPLP+DRT+CPLCSQKR NPSVV VSGFVFCYACIFK
Sbjct: 307  RMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTICPLCSQKRTNPSVVAVSGFVFCYACIFK 366

Query: 355  YVSQYKRCPVTLMPATVDQIRRLFHDV 275
            YVSQYKRCP+TLM A VDQIRRLFHDV
Sbjct: 367  YVSQYKRCPITLMLANVDQIRRLFHDV 393


>ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|222858035|gb|EEE95582.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  466 bits (1200), Expect = e-128
 Identities = 233/327 (71%), Positives = 256/327 (78%)
 Frame = -2

Query: 1255 SFAPPDASFSESLYGLRRRAVNIKMKKGNNRSEAGDRIHQSGLEKHQKVLSVVFLVVLPY 1076
            S    DASF+ESLYGLRRRAV I++KK + R ++GD I  SGLEKHQ++LSVVFLVVLPY
Sbjct: 67   SLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVFLVVLPY 126

Query: 1075 FKSKLHTIYNKEREATLQASLWGHGDDRFXXXXXXXXXXXSFVSTSGSDMEVSARTRFTK 896
            FKSKLH+IYNKEREA LQASLWG+GD+             S VS    D E + R R TK
Sbjct: 127  FKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATIRARLTK 186

Query: 895  RIQKIVGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQELMDTXX 716
            +IQKIV  CYPW+HA +EG++FAYQLLYLLDATGFYS GLHALG+HVCRATGQELMDT  
Sbjct: 187  KIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQELMDTSS 246

Query: 715  XXXXXXXXXXXXXRGPPWLKALQGALLSCSYAVLDYAQTGLIAAVFFFKMMEWWYQSAEE 536
                         RGPPWLK  QGALLSC+Y +LDYAQTGLIAAVF FKMMEWWYQSAEE
Sbjct: 247  RISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWWYQSAEE 306

Query: 535  RMSAPTVYXXXXXXXXPKVAKEGIPLPADRTVCPLCSQKRANPSVVTVSGFVFCYACIFK 356
            RMSAPTVY        PKVAKEGIPLP DRT+CPLCSQ RANPSVVT+SGFVFCYACIFK
Sbjct: 307  RMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFCYACIFK 366

Query: 355  YVSQYKRCPVTLMPATVDQIRRLFHDV 275
            YVSQY RCPVTLMPA VD IRRLFHD+
Sbjct: 367  YVSQYNRCPVTLMPANVDHIRRLFHDM 393


>dbj|BAH09867.1| peroxin 12 [Nicotiana tabacum]
          Length = 393

 Score =  465 bits (1197), Expect = e-128
 Identities = 233/327 (71%), Positives = 255/327 (77%)
 Frame = -2

Query: 1255 SFAPPDASFSESLYGLRRRAVNIKMKKGNNRSEAGDRIHQSGLEKHQKVLSVVFLVVLPY 1076
            S    D SF+ESLYGLRRRAV IK+K  N   +  + I+ +GLEK QKVLSVVFLV+LPY
Sbjct: 67   SLRTTDGSFAESLYGLRRRAVKIKVKGDNKGPDVREEINHTGLEKRQKVLSVVFLVILPY 126

Query: 1075 FKSKLHTIYNKEREATLQASLWGHGDDRFXXXXXXXXXXXSFVSTSGSDMEVSARTRFTK 896
             +SKLH+IYNKERE  LQA+LWGH D+RF           S VS S SD E S R R  K
Sbjct: 127  LRSKLHSIYNKEREVALQATLWGHEDERFGDTDYFDGAGNSTVSMSSSDAEESVRDRLRK 186

Query: 895  RIQKIVGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQELMDTXX 716
            +I+KIV  CYPWIHAGNEG +FAYQLLYLLDATGFYS GLHALG+HVCRATGQELMDT  
Sbjct: 187  KIRKIVAACYPWIHAGNEGFSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTSS 246

Query: 715  XXXXXXXXXXXXXRGPPWLKALQGALLSCSYAVLDYAQTGLIAAVFFFKMMEWWYQSAEE 536
                         RGPPWLKA+Q  LLSC+Y VLDYAQTGLIAAVFFFKMMEWWYQSAEE
Sbjct: 247  RISKIRSHERERLRGPPWLKAVQSGLLSCAYGVLDYAQTGLIAAVFFFKMMEWWYQSAEE 306

Query: 535  RMSAPTVYXXXXXXXXPKVAKEGIPLPADRTVCPLCSQKRANPSVVTVSGFVFCYACIFK 356
            RMSAPTVY        PKVAKEGIPLP+DRT+CPLCSQKRANPSVV+VSGFVFCY+CIF+
Sbjct: 307  RMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTLCPLCSQKRANPSVVSVSGFVFCYSCIFR 366

Query: 355  YVSQYKRCPVTLMPATVDQIRRLFHDV 275
            YVSQYKRCPVTLMPA VDQIRRLF DV
Sbjct: 367  YVSQYKRCPVTLMPANVDQIRRLFDDV 393


>ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|222862649|gb|EEF00156.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  464 bits (1193), Expect = e-127
 Identities = 233/327 (71%), Positives = 255/327 (77%)
 Frame = -2

Query: 1255 SFAPPDASFSESLYGLRRRAVNIKMKKGNNRSEAGDRIHQSGLEKHQKVLSVVFLVVLPY 1076
            S    DASFSESLYGLRRR V I++KK + R  +GD I  SGLEKHQ++LSVVFLVVLPY
Sbjct: 67   SLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVFLVVLPY 126

Query: 1075 FKSKLHTIYNKEREATLQASLWGHGDDRFXXXXXXXXXXXSFVSTSGSDMEVSARTRFTK 896
            FKSKL++IYNKEREA LQASLWG+GD+             S VS      E + R R  K
Sbjct: 127  FKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFSGGEASLVSR-----ETTIRARLMK 181

Query: 895  RIQKIVGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQELMDTXX 716
            +IQKI+ VCYPW+HA NEG++FAYQLLYLLDATGFYS GLHALG+HVCRATGQELMDT  
Sbjct: 182  KIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTTS 241

Query: 715  XXXXXXXXXXXXXRGPPWLKALQGALLSCSYAVLDYAQTGLIAAVFFFKMMEWWYQSAEE 536
                          GPPWLKALQGALLSC Y +LDYAQTGLIAAVF FKMMEWWYQSAEE
Sbjct: 242  RISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIAAVFIFKMMEWWYQSAEE 301

Query: 535  RMSAPTVYXXXXXXXXPKVAKEGIPLPADRTVCPLCSQKRANPSVVTVSGFVFCYACIFK 356
            RMSAPTVY        PKVAKEGIPLP DRT+CPLCSQKRANPSVVT+SGFVFCYACIFK
Sbjct: 302  RMSAPTVYPPPPPPPAPKVAKEGIPLPPDRTICPLCSQKRANPSVVTISGFVFCYACIFK 361

Query: 355  YVSQYKRCPVTLMPATVDQIRRLFHDV 275
            Y+SQY RCPVTLMPA VDQIRRLFHD+
Sbjct: 362  YLSQYNRCPVTLMPANVDQIRRLFHDM 388


>ref|XP_004152815.1| PREDICTED: peroxisome biogenesis protein 12-like [Cucumis sativus]
            gi|449477734|ref|XP_004155107.1| PREDICTED: peroxisome
            biogenesis protein 12-like [Cucumis sativus]
          Length = 393

 Score =  457 bits (1176), Expect = e-125
 Identities = 227/327 (69%), Positives = 251/327 (76%)
 Frame = -2

Query: 1255 SFAPPDASFSESLYGLRRRAVNIKMKKGNNRSEAGDRIHQSGLEKHQKVLSVVFLVVLPY 1076
            S    DASFSESLYGLRRRAVN+++KK + RS +GD I   GLEKHQKVLSV FLVVLPY
Sbjct: 67   SLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAFLVVLPY 126

Query: 1075 FKSKLHTIYNKEREATLQASLWGHGDDRFXXXXXXXXXXXSFVSTSGSDMEVSARTRFTK 896
            FKSKLH+IYNKERE  LQASLWG  ++ F           + V T    +E S R R  K
Sbjct: 127  FKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSVRARVMK 186

Query: 895  RIQKIVGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQELMDTXX 716
            + QKIVG CYPW+HA +EGL+FAYQLLYLLDATGFYS GL  +GVHVCRATGQELMDT  
Sbjct: 187  KFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMDTSS 246

Query: 715  XXXXXXXXXXXXXRGPPWLKALQGALLSCSYAVLDYAQTGLIAAVFFFKMMEWWYQSAEE 536
                         RGPPWLKA+QG LL+C Y +LDYAQTGLIAAVFFFKMMEWWYQSAEE
Sbjct: 247  RISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWWYQSAEE 306

Query: 535  RMSAPTVYXXXXXXXXPKVAKEGIPLPADRTVCPLCSQKRANPSVVTVSGFVFCYACIFK 356
            RMSAPTVY        PKVAKEGIPLP +RT+CPLCS KRANPSVVTVSGFVFCY CIFK
Sbjct: 307  RMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFCYTCIFK 366

Query: 355  YVSQYKRCPVTLMPATVDQIRRLFHDV 275
            Y+SQYKRCP+TLMPA VD +RRLFHD+
Sbjct: 367  YISQYKRCPITLMPANVDHVRRLFHDM 393


Top