BLASTX nr result

ID: Panax21_contig00000995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000995
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE42972.1| putative 60S ribosomal protein L18a [Gardenia jas...   134   4e-29
gb|AFX66998.1| 60S ribosomal protein L18a [Solanum tuberosum]         134   5e-29
gb|ABB29928.1| unknown [Solanum tuberosum]                            132   1e-28
gb|ABA46783.1| unknown [Solanum tuberosum]                            132   1e-28
ref|XP_002268750.1| PREDICTED: 60S ribosomal protein L18a [Vitis...   131   2e-28

>gb|ADE42972.1| putative 60S ribosomal protein L18a [Gardenia jasminoides]
          Length = 178

 Score =  134 bits (337), Expect = 4e-29
 Identities = 71/109 (65%), Positives = 76/109 (69%)
 Frame = +3

Query: 609 GYHNMYNMYKEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKVCKRERTKQL 788
           GYHNMY   KEYRDTTLNGAVEQMYTEMASRHRVR+HCIQIIKTAT+PAK+CKRE TKQ 
Sbjct: 88  GYHNMY---KEYRDTTLNGAVEQMYTEMASRHRVRYHCIQIIKTATVPAKLCKRESTKQF 144

Query: 789 HNSKIKFPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYKASRPNLFV 935
           HNSKI+FPLV                            TYKASRPNLF+
Sbjct: 145 HNSKIRFPLV---------------FKKVRPPSRKLKTTYKASRPNLFM 178


>gb|AFX66998.1| 60S ribosomal protein L18a [Solanum tuberosum]
          Length = 178

 Score =  134 bits (336), Expect = 5e-29
 Identities = 71/109 (65%), Positives = 76/109 (69%)
 Frame = +3

Query: 609 GYHNMYNMYKEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKVCKRERTKQL 788
           GYHNMY   KEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAK+CKRE TKQ 
Sbjct: 88  GYHNMY---KEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKLCKRESTKQF 144

Query: 789 HNSKIKFPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYKASRPNLFV 935
           H+SKIKFPLV                            TYKA++PNLF+
Sbjct: 145 HDSKIKFPLV---------------FKKVRPPTRKLKTTYKATKPNLFM 178


>gb|ABB29928.1| unknown [Solanum tuberosum]
          Length = 178

 Score =  132 bits (332), Expect = 1e-28
 Identities = 70/109 (64%), Positives = 75/109 (68%)
 Frame = +3

Query: 609 GYHNMYNMYKEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKVCKRERTKQL 788
           GYHNMY   KEYRDTTLNG VEQMYTEMASRHRVRHHCIQIIKTATIPAK+CKRE TKQ 
Sbjct: 88  GYHNMY---KEYRDTTLNGGVEQMYTEMASRHRVRHHCIQIIKTATIPAKLCKRESTKQF 144

Query: 789 HNSKIKFPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYKASRPNLFV 935
           H+SKIKFPLV                            TYKA++PNLF+
Sbjct: 145 HDSKIKFPLV---------------FKKVRPPTRKLKTTYKATKPNLFM 178


>gb|ABA46783.1| unknown [Solanum tuberosum]
          Length = 178

 Score =  132 bits (332), Expect = 1e-28
 Identities = 70/109 (64%), Positives = 75/109 (68%)
 Frame = +3

Query: 609 GYHNMYNMYKEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKVCKRERTKQL 788
           GYHNMY   KEYRDTTLNG VEQMYTEMASRHRVRHHCIQIIKTATIPAK+CKRE TKQ 
Sbjct: 88  GYHNMY---KEYRDTTLNGGVEQMYTEMASRHRVRHHCIQIIKTATIPAKLCKRESTKQF 144

Query: 789 HNSKIKFPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYKASRPNLFV 935
           H+SKIKFPLV                            TYKA++PNLF+
Sbjct: 145 HDSKIKFPLV---------------FKKVRPPSRKLKTTYKATKPNLFM 178


>ref|XP_002268750.1| PREDICTED: 60S ribosomal protein L18a [Vitis vinifera]
           gi|296082827|emb|CBI22128.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  131 bits (330), Expect = 2e-28
 Identities = 71/109 (65%), Positives = 76/109 (69%)
 Frame = +3

Query: 609 GYHNMYNMYKEYRDTTLNGAVEQMYTEMASRHRVRHHCIQIIKTATIPAKVCKRERTKQL 788
           GYHNMY   KEYRDTTLNG+VEQMYTEMASRHRVR+ CIQIIKTATIPAK+CKRE TKQ+
Sbjct: 88  GYHNMY---KEYRDTTLNGSVEQMYTEMASRHRVRYPCIQIIKTATIPAKLCKRESTKQM 144

Query: 789 HNSKIKFPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYKASRPNLFV 935
           HNSKIKFPLV                            TYKASRPNLF+
Sbjct: 145 HNSKIKFPLV---------------VRKVRPPTRKLKTTYKASRPNLFM 178


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