BLASTX nr result

ID: Panax21_contig00000993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000993
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE42972.1| putative 60S ribosomal protein L18a [Gardenia jas...   257   6e-67
gb|ABA46783.1| unknown [Solanum tuberosum]                            257   8e-67
gb|AFX66998.1| 60S ribosomal protein L18a [Solanum tuberosum]         254   4e-66
ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|1...   254   7e-66
gb|ABB29928.1| unknown [Solanum tuberosum]                            253   1e-65

>gb|ADE42972.1| putative 60S ribosomal protein L18a [Gardenia jasminoides]
          Length = 178

 Score =  257 bits (657), Expect = 6e-67
 Identities = 122/127 (96%), Positives = 127/127 (100%)
 Frame = -1

Query: 383 KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 204
           KKVKKSNGQ+LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT
Sbjct: 51  KKVKKSNGQVLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 110

Query: 203 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYK 24
           EMASRHRVR+HCIQIIKTAT+PAKLCKRESTKQFHNSKI+FPLVFKKVRPP+RKLKTTYK
Sbjct: 111 EMASRHRVRYHCIQIIKTATVPAKLCKRESTKQFHNSKIRFPLVFKKVRPPSRKLKTTYK 170

Query: 23  ASRPNLF 3
           ASRPNLF
Sbjct: 171 ASRPNLF 177


>gb|ABA46783.1| unknown [Solanum tuberosum]
          Length = 178

 Score =  257 bits (656), Expect = 8e-67
 Identities = 122/127 (96%), Positives = 126/127 (99%)
 Frame = -1

Query: 383 KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 204
           KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYT
Sbjct: 51  KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYT 110

Query: 203 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYK 24
           EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVFKKVRPP+RKLKTTYK
Sbjct: 111 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPSRKLKTTYK 170

Query: 23  ASRPNLF 3
           A++PNLF
Sbjct: 171 ATKPNLF 177


>gb|AFX66998.1| 60S ribosomal protein L18a [Solanum tuberosum]
          Length = 178

 Score =  254 bits (650), Expect = 4e-66
 Identities = 122/127 (96%), Positives = 125/127 (98%)
 Frame = -1

Query: 383 KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 204
           KKVKKSNGQMLAINEIFEK PT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT
Sbjct: 51  KKVKKSNGQMLAINEIFEKYPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 110

Query: 203 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYK 24
           EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVFKKVRPPTRKLKTTYK
Sbjct: 111 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYK 170

Query: 23  ASRPNLF 3
           A++PNLF
Sbjct: 171 ATKPNLF 177


>ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|118483631|gb|ABK93710.1|
           unknown [Populus trichocarpa]
           gi|222860449|gb|EEE97996.1| predicted protein [Populus
           trichocarpa]
          Length = 178

 Score =  254 bits (648), Expect = 7e-66
 Identities = 123/127 (96%), Positives = 125/127 (98%)
 Frame = -1

Query: 383 KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 204
           KKVKKSNGQ+LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT
Sbjct: 51  KKVKKSNGQVLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 110

Query: 203 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYK 24
           EMASRHRVR  CIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPP+RKLKTTYK
Sbjct: 111 EMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYK 170

Query: 23  ASRPNLF 3
           ASRPNLF
Sbjct: 171 ASRPNLF 177


>gb|ABB29928.1| unknown [Solanum tuberosum]
          Length = 178

 Score =  253 bits (646), Expect = 1e-65
 Identities = 121/127 (95%), Positives = 124/127 (97%)
 Frame = -1

Query: 383 KKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYT 204
           KKVKKSNGQMLAINEIFEK PT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYT
Sbjct: 51  KKVKKSNGQMLAINEIFEKYPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYT 110

Query: 203 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYK 24
           EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFH+SKIKFPLVFKKVRPPTRKLKTTYK
Sbjct: 111 EMASRHRVRHHCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYK 170

Query: 23  ASRPNLF 3
           A++PNLF
Sbjct: 171 ATKPNLF 177


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