BLASTX nr result

ID: Panax21_contig00000965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000965
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]              143   1e-32
gb|AAP83637.1| katanin [Gossypium hirsutum]                           143   1e-32
gb|AAP83638.1| katanin [Gossypium barbadense]                         143   2e-32
ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing sub...   142   2e-32
ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing sub...   142   2e-32

>gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]
          Length = 520

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = +2

Query: 110 MAGTSLTGLRDHLKLAREYAVEGIYDTSIIFFDGAIAQINKHLSTLDDPLIRAKWMNVKK 289
           M G SL GL+DHLKLAREYA+EG+YDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60

Query: 290 ALSEEMEVVKQLDAKRSAFKDTCMGR 367
           ALSEE EVVKQLDA+R +FK+   GR
Sbjct: 61  ALSEETEVVKQLDAERRSFKEAPNGR 86


>gb|AAP83637.1| katanin [Gossypium hirsutum]
          Length = 520

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = +2

Query: 110 MAGTSLTGLRDHLKLAREYAVEGIYDTSIIFFDGAIAQINKHLSTLDDPLIRAKWMNVKK 289
           M G SL GL+DHLKLAREYA+EG+YDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60

Query: 290 ALSEEMEVVKQLDAKRSAFKDTCMGR 367
           ALSEE EVVKQLDA+R +FK+   GR
Sbjct: 61  ALSEEAEVVKQLDAERRSFKEAPNGR 86


>gb|AAP83638.1| katanin [Gossypium barbadense]
          Length = 521

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +2

Query: 110 MAGTSLTGLRDHLKLAREYAVEGIYDTSIIFFDGAIAQINKHLSTLDDPLIRAKWMNVKK 289
           M G SL GL+DHLKLAREYA+EG+YDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60

Query: 290 ALSEEMEVVKQLDAKRSAFKDTCMG 364
           ALSEE EVVKQLDA+R AFK+   G
Sbjct: 61  ALSEETEVVKQLDAERKAFKEAPNG 85


>ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 2
           [Glycine max]
          Length = 525

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +2

Query: 110 MAGTSLTGLRDHLKLAREYAVEGIYDTSIIFFDGAIAQINKHLSTLDDPLIRAKWMNVKK 289
           M G SL GL++HLKLAR+YA+EG+YDTSIIFFDGA+AQINKHLST++DPLIRAKWMNVKK
Sbjct: 1   MVGGSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKK 60

Query: 290 ALSEEMEVVKQLDAKRSAFKDTCMGR 367
           ALSEE EVVKQLDA+R AFKD  +GR
Sbjct: 61  ALSEETEVVKQLDAERRAFKDNPIGR 86


>ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 1
           [Glycine max]
          Length = 533

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +2

Query: 110 MAGTSLTGLRDHLKLAREYAVEGIYDTSIIFFDGAIAQINKHLSTLDDPLIRAKWMNVKK 289
           M G SL GL++HLKLAR+YA+EG+YDTSIIFFDGA+AQINKHLST++DPLIRAKWMNVKK
Sbjct: 1   MVGGSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKK 60

Query: 290 ALSEEMEVVKQLDAKRSAFKDTCMGR 367
           ALSEE EVVKQLDA+R AFKD  +GR
Sbjct: 61  ALSEETEVVKQLDAERRAFKDNPIGR 86


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