BLASTX nr result

ID: Panax21_contig00000963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000963
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548728.1| PREDICTED: importin-5 [Glycine max]                64   4e-08
ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08
ref|XP_002304857.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08
ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]...    62   9e-08
emb|CBI29954.3| unnamed protein product [Vitis vinifera]               61   2e-07

>ref|XP_003548728.1| PREDICTED: importin-5 [Glycine max]
          Length = 1114

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 37/83 (44%), Positives = 48/83 (57%)
 Frame = +1

Query: 466 IILVAYEVLPVYLGAPELQKHHATLIALAQITEGCSKRVPENSVFVMGDNRNNGYDSHV* 645
           I+ VA E+LP YL APE +KHHA LIALAQI EGCSK + +N   V+    N+ +D H  
Sbjct: 373 IVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFHDPH-- 430

Query: 646 LLLRPALQYWVSNFCATFTEDKG 714
               P +Q+   N     + D G
Sbjct: 431 ----PRVQWAAINAIGQLSTDLG 449


>ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|222846363|gb|EEE83910.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%)
 Frame = +1

Query: 466 IILVAYEVLPVYLGAPELQKHHATLIALAQITEGCSKRVPENSVFVMGDNRNNGYDSH 639
           I+ VA E LP YL APE QKHHA LIALAQI EGCSK + +N   V+    N+ YD H
Sbjct: 373 IVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMLKNLEQVVTMVLNSFYDPH 430


>ref|XP_002304857.1| predicted protein [Populus trichocarpa] gi|222842289|gb|EEE79836.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%)
 Frame = +1

Query: 466 IILVAYEVLPVYLGAPELQKHHATLIALAQITEGCSKRVPENSVFVMGDNRNNGYDSH 639
           I+ VA E LP YL APE QKHHA LIALAQI EGCSK + +N   V+    N+ YD H
Sbjct: 373 IVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMLKNLEQVVTMVLNSFYDPH 430


>ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]
           gi|223528270|gb|EEF30321.1| importin beta-3, putative
           [Ricinus communis]
          Length = 1095

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = +1

Query: 466 IILVAYEVLPVYLGAPELQKHHATLIALAQITEGCSKRVPENSVFVMGDNRNNGYDSH 639
           I+ VA E LP YL APE QKHHA LIALAQI EGCSK + +N   V+    N+ +D H
Sbjct: 385 IVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEHVVSMVLNSFHDPH 442


>emb|CBI29954.3| unnamed protein product [Vitis vinifera]
          Length = 1002

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = +1

Query: 466 IILVAYEVLPVYLGAPELQKHHATLIALAQITEGCSKRVPENSVFVMGDNRNNGYDSH 639
           I+ VA E+LP YL APE QKHHA LIALAQI EGCSK + +N   ++    N+  D H
Sbjct: 260 IVPVASELLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQIVSMVLNSFQDPH 317


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