BLASTX nr result

ID: Panax21_contig00000958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000958
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET80381.1| alpha-tubulin [x Doritaenopsis hybrid cultivar]        278   4e-73
ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus commu...   278   4e-73
gb|ABO47735.1| alpha-tubulin [Gossypium hirsutum]                     278   4e-73
gb|ABO47741.1| alpha-tubulin [Gossypium hirsutum]                     278   4e-73
ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   278   4e-73

>gb|AET80381.1| alpha-tubulin [x Doritaenopsis hybrid cultivar]
          Length = 258

 Score =  278 bits (710), Expect = 4e-73
 Identities = 136/138 (98%), Positives = 138/138 (100%)
 Frame = -1

Query: 415 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 236
           AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT
Sbjct: 79  AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 138

Query: 235 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITNAVFEPS 56
           TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEITNAVFEPS
Sbjct: 139 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPS 198

Query: 55  SMMAKCDPRHGKYMACCL 2
           SMMAKCDPRHGKYMACCL
Sbjct: 199 SMMAKCDPRHGKYMACCL 216


>ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus communis]
           gi|223528272|gb|EEF30323.1| tubulin alpha chain,
           putative [Ricinus communis]
          Length = 449

 Score =  278 bits (710), Expect = 4e-73
 Identities = 136/138 (98%), Positives = 138/138 (100%)
 Frame = -1

Query: 415 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 236
           AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT
Sbjct: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239

Query: 235 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITNAVFEPS 56
           TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEITNAVFEPS
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPS 299

Query: 55  SMMAKCDPRHGKYMACCL 2
           SMMAKCDPRHGKYMACCL
Sbjct: 300 SMMAKCDPRHGKYMACCL 317


>gb|ABO47735.1| alpha-tubulin [Gossypium hirsutum]
          Length = 449

 Score =  278 bits (710), Expect = 4e-73
 Identities = 136/138 (98%), Positives = 138/138 (100%)
 Frame = -1

Query: 415 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 236
           AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT
Sbjct: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239

Query: 235 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITNAVFEPS 56
           TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEITNAVFEPS
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPS 299

Query: 55  SMMAKCDPRHGKYMACCL 2
           SMMAKCDPRHGKYMACCL
Sbjct: 300 SMMAKCDPRHGKYMACCL 317


>gb|ABO47741.1| alpha-tubulin [Gossypium hirsutum]
          Length = 449

 Score =  278 bits (710), Expect = 4e-73
 Identities = 136/138 (98%), Positives = 138/138 (100%)
 Frame = -1

Query: 415 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 236
           AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT
Sbjct: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239

Query: 235 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITNAVFEPS 56
           TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEITNAVFEPS
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPS 299

Query: 55  SMMAKCDPRHGKYMACCL 2
           SMMAKCDPRHGKYMACCL
Sbjct: 300 SMMAKCDPRHGKYMACCL 317


>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  278 bits (710), Expect = 4e-73
 Identities = 136/138 (98%), Positives = 138/138 (100%)
 Frame = -1

Query: 415 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLT 236
           AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLT
Sbjct: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239

Query: 235 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITNAVFEPS 56
           TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEITNAVFEPS
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPS 299

Query: 55  SMMAKCDPRHGKYMACCL 2
           SMMAKCDPRHGKYMACCL
Sbjct: 300 SMMAKCDPRHGKYMACCL 317


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