BLASTX nr result

ID: Panax21_contig00000957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000957
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   770   0.0  
ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group] g...   768   0.0  
ref|XP_003562846.1| PREDICTED: tubulin alpha-1 chain-like [Brach...   767   0.0  
ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus commu...   767   0.0  
gb|ABD92942.1| alpha tubulin-1D [Triticum aestivum] gi|90289624|...   767   0.0  

>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  770 bits (1988), Expect = 0.0
 Identities = 376/402 (93%), Positives = 381/402 (94%)
 Frame = +3

Query: 3    IHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNTVGVAHDAFNTFFSETGAGKHVPRAI 182
            IHIGQAGIQVGNSCWELYCLEHGIQPDG+MPSD TVGV HDAFNTFFSETGAGKHVPRAI
Sbjct: 7    IHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGKHVPRAI 66

Query: 183  FLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 362
            F+DLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA
Sbjct: 67   FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 126

Query: 363  DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYN 542
            DNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTAVVEPYN
Sbjct: 127  DNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186

Query: 543  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDG 722
            SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDG
Sbjct: 187  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDG 246

Query: 723  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 902
            AINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD
Sbjct: 247  AINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 306

Query: 903  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAPTVVPGG 1082
            PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQ PTVVPGG
Sbjct: 307  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGG 366

Query: 1083 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWY 1208
            DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWY
Sbjct: 367  DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWY 408


>ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group]
            gi|135399|sp|P28752.1|TBA1_ORYSJ RecName: Full=Tubulin
            alpha-1 chain gi|20379|emb|CAA77988.1| alpha 1 tubulin
            [Oryza sativa Japonica Group] gi|1136124|emb|CAA62918.1|
            alfa-tubulin [Oryza sativa Japonica Group]
            gi|34393570|dbj|BAC83168.1| Tubulin alpha-1 chain [Oryza
            sativa Japonica Group] gi|50509129|dbj|BAD30236.1|
            Tubulin alpha-1 chain [Oryza sativa Japonica Group]
            gi|110617750|gb|ABG78594.1| alpha-tubulin [Oryza sativa
            Japonica Group] gi|113611611|dbj|BAF21989.1| Os07g0574800
            [Oryza sativa Japonica Group] gi|125558900|gb|EAZ04436.1|
            hypothetical protein OsI_26583 [Oryza sativa Indica
            Group] gi|125600815|gb|EAZ40391.1| hypothetical protein
            OsJ_24840 [Oryza sativa Japonica Group]
            gi|215695370|dbj|BAG90561.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215697286|dbj|BAG91280.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215740861|dbj|BAG97017.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 450

 Score =  768 bits (1982), Expect = 0.0
 Identities = 375/402 (93%), Positives = 382/402 (95%)
 Frame = +3

Query: 3    IHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNTVGVAHDAFNTFFSETGAGKHVPRAI 182
            IHIGQAGIQVGN+CWELYCLEHGI+PDG MPSD TVGVAHDAFNTFFSETGAGKHVPRAI
Sbjct: 7    IHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAI 66

Query: 183  FLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 362
            F+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA
Sbjct: 67   FVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 126

Query: 363  DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYN 542
            DNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTAVVEPYN
Sbjct: 127  DNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186

Query: 543  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDG 722
            SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDG
Sbjct: 187  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDG 246

Query: 723  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 902
            AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD
Sbjct: 247  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 306

Query: 903  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAPTVVPGG 1082
            PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQ P+VVPGG
Sbjct: 307  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366

Query: 1083 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWY 1208
            DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWY
Sbjct: 367  DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWY 408


>ref|XP_003562846.1| PREDICTED: tubulin alpha-1 chain-like [Brachypodium distachyon]
          Length = 450

 Score =  767 bits (1981), Expect = 0.0
 Identities = 376/402 (93%), Positives = 382/402 (95%)
 Frame = +3

Query: 3    IHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNTVGVAHDAFNTFFSETGAGKHVPRAI 182
            IHIGQAGIQVGN+CWELYCLEHGIQ DG MPSD+TVGVAHDAFNTFFSETGAGKHVPRAI
Sbjct: 7    IHIGQAGIQVGNACWELYCLEHGIQQDGTMPSDSTVGVAHDAFNTFFSETGAGKHVPRAI 66

Query: 183  FLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 362
            F+DLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA
Sbjct: 67   FVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 126

Query: 363  DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYN 542
            DNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTAVVEPYN
Sbjct: 127  DNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186

Query: 543  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDG 722
            SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDG
Sbjct: 187  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDG 246

Query: 723  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 902
            AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD
Sbjct: 247  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 306

Query: 903  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAPTVVPGG 1082
            PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQ P+VVPGG
Sbjct: 307  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366

Query: 1083 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWY 1208
            DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWY
Sbjct: 367  DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWY 408


>ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus communis]
            gi|223528272|gb|EEF30323.1| tubulin alpha chain, putative
            [Ricinus communis]
          Length = 449

 Score =  767 bits (1980), Expect = 0.0
 Identities = 373/402 (92%), Positives = 382/402 (95%)
 Frame = +3

Query: 3    IHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNTVGVAHDAFNTFFSETGAGKHVPRAI 182
            IHIGQAGIQVGNSCWELYCLEHGIQPDG+MPSD +VGV HDAFNTFFSETG+GKHVPRA+
Sbjct: 7    IHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVGHDAFNTFFSETGSGKHVPRAV 66

Query: 183  FLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 362
            F+DLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA
Sbjct: 67   FVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 126

Query: 363  DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYN 542
            DNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTAVVEPYN
Sbjct: 127  DNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186

Query: 543  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDG 722
            SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDG
Sbjct: 187  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDG 246

Query: 723  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 902
            AINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD
Sbjct: 247  AINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 306

Query: 903  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAPTVVPGG 1082
            PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQ P+VVPGG
Sbjct: 307  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366

Query: 1083 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWY 1208
            DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWY
Sbjct: 367  DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWY 408


>gb|ABD92942.1| alpha tubulin-1D [Triticum aestivum] gi|90289624|gb|ABD92944.1| alpha
            tubulin-1A [Triticum aestivum]
          Length = 450

 Score =  767 bits (1980), Expect = 0.0
 Identities = 376/402 (93%), Positives = 381/402 (94%)
 Frame = +3

Query: 3    IHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNTVGVAHDAFNTFFSETGAGKHVPRAI 182
            IHIGQAGIQVGN+CWELYCLEHGIQ DG MPSD TVGVAHDAFNTFFSETGAGKHVPRAI
Sbjct: 7    IHIGQAGIQVGNACWELYCLEHGIQQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAI 66

Query: 183  FLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 362
            F+DLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA
Sbjct: 67   FVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLA 126

Query: 363  DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYN 542
            DNCTGLQGFLVFNAV                 VDYGKKSKLGFTIYPSPQVSTAVVEPYN
Sbjct: 127  DNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186

Query: 543  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDG 722
            SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDG
Sbjct: 187  SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDG 246

Query: 723  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 902
            AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD
Sbjct: 247  AINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCD 306

Query: 903  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAPTVVPGG 1082
            PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQ P+VVPGG
Sbjct: 307  PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366

Query: 1083 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWY 1208
            DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWY
Sbjct: 367  DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWY 408


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