BLASTX nr result

ID: Panax21_contig00000950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000950
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA82596.1| C-ABI3 protein [Daucus carota]                        195   3e-48
ref|XP_003632397.1| PREDICTED: B3 domain-containing transcriptio...   169   3e-40
emb|CAN72435.1| hypothetical protein VITISV_009009 [Vitis vinifera]   169   3e-40
ref|XP_002303088.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
emb|CAA05922.1| ABI3 [Populus trichocarpa]                            140   2e-31

>dbj|BAA82596.1| C-ABI3 protein [Daucus carota]
          Length = 663

 Score =  195 bits (496), Expect = 3e-48
 Identities = 105/177 (59%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
 Frame = -1

Query: 536 MEDADCMDVMEDFGYMDLI-DGNDIWDPSSIFHQNLDDQGEAGDYSNQKEQVSDFMLQGN 360
           +   DCM VME+FGYMDLI DGN+ WDPSSIF  +        D SN  E++ D   QG 
Sbjct: 94  LSSTDCMGVMEEFGYMDLIEDGNEGWDPSSIFRND--------DESNVGEELID---QGG 142

Query: 359 SELVQEKEERLGLDELGVMFFEWLKTNKEHISAEDMRNIKLKRATIECASKRLGSTKEGR 180
            +  +  EE +GLDELGVMFFEWLKTNKEHISAEDM+NI+ K++TIECA KR+GS+KEG+
Sbjct: 143 FKEEERVEEEMGLDELGVMFFEWLKTNKEHISAEDMKNIRFKKSTIECAYKRMGSSKEGK 202

Query: 179 KQLLKLILEWVEQYQLQKKRSRXXXXXXXXXXXAVSQIPRQYDEEQPFPDPNPNLVN 9
           KQLLKLILEWVEQYQLQKKRSR           +  Q+P  Y E  P P+PN N VN
Sbjct: 203 KQLLKLILEWVEQYQLQKKRSREAAEAAAEAATS-HQVPCLYQEPNPNPNPNSNFVN 258


>ref|XP_003632397.1| PREDICTED: B3 domain-containing transcription factor ABI3-like
           [Vitis vinifera]
          Length = 733

 Score =  169 bits (428), Expect = 3e-40
 Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 13/186 (6%)
 Frame = -1

Query: 536 MEDADCMDVMEDFGYMDLIDGNDIWDPSSIFHQNLDDQGEAGDYSNQKE----------- 390
           +ED DC++VME+FGYMDL++ NDIWDPSS+FH +     EA     Q++           
Sbjct: 161 LEDVDCINVMENFGYMDLLEPNDIWDPSSLFHMDDSHDFEAEQQPQQEQEQPKPQPELPP 220

Query: 389 --QVSDFMLQGNSELVQEKEERLGLDELGVMFFEWLKTNKEHISAEDMRNIKLKRATIEC 216
             Q  +FM+Q N E  Q   E     +L ++FFEWLK+NKE IS ED+RNIKLKRATIEC
Sbjct: 221 QQQDEEFMVQRNDEEGQRPSE-----DLAMVFFEWLKSNKESISPEDLRNIKLKRATIEC 275

Query: 215 ASKRLGSTKEGRKQLLKLILEWVEQYQLQKKRSRXXXXXXXXXXXAVSQIPRQYDEEQPF 36
           A+KRLG  KEG KQLLKLILEWV+ +QLQKKR              +S  P  Y +    
Sbjct: 276 AAKRLGGGKEGMKQLLKLILEWVQNHQLQKKR---------ISETQISHFPYNYQDPYAT 326

Query: 35  PDPNPN 18
             PNPN
Sbjct: 327 QSPNPN 332


>emb|CAN72435.1| hypothetical protein VITISV_009009 [Vitis vinifera]
          Length = 819

 Score =  169 bits (428), Expect = 3e-40
 Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 13/186 (6%)
 Frame = -1

Query: 536 MEDADCMDVMEDFGYMDLIDGNDIWDPSSIFHQNLDDQGEAGDYSNQKE----------- 390
           +ED DC++VME+FGYMDL++ NDIWDPSS+FH +     EA     Q++           
Sbjct: 161 LEDVDCINVMENFGYMDLLEPNDIWDPSSLFHMDDSHDFEAEQQPQQEQEQPKPQPELPP 220

Query: 389 --QVSDFMLQGNSELVQEKEERLGLDELGVMFFEWLKTNKEHISAEDMRNIKLKRATIEC 216
             Q  +FM+Q N E  Q   E     +L ++FFEWLK+NKE IS ED+RNIKLKRATIEC
Sbjct: 221 QQQDEEFMVQRNDEEGQRPSE-----DLAMVFFEWLKSNKESISPEDLRNIKLKRATIEC 275

Query: 215 ASKRLGSTKEGRKQLLKLILEWVEQYQLQKKRSRXXXXXXXXXXXAVSQIPRQYDEEQPF 36
           A+KRLG  KEG KQLLKLILEWV+ +QLQKKR              +S  P  Y +    
Sbjct: 276 AAKRLGGGKEGMKQLLKLILEWVQNHQLQKKR---------ISETQISHFPYNYQDPYAT 326

Query: 35  PDPNPN 18
             PNPN
Sbjct: 327 QSPNPN 332


>ref|XP_002303088.1| predicted protein [Populus trichocarpa] gi|222844814|gb|EEE82361.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  140 bits (352), Expect = 2e-31
 Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 12/182 (6%)
 Frame = -1

Query: 524 DCMDVMEDFGYMDLIDGNDIWDPSSIFHQNLDDQGEAGDYSNQKEQVSD-FMLQ-----G 363
           +CMDVMEDFGY+DL++ ND +DPSSIFH    D+G   ++  ++ +  D   LQ     G
Sbjct: 113 ECMDVMEDFGYIDLLESNDFFDPSSIFHP---DEGIFEEFQMEQNEPQDQLQLQYDEQAG 169

Query: 362 NSELVQEKEERLG------LDELGVMFFEWLKTNKEHISAEDMRNIKLKRATIECASKRL 201
           N E+ + K ++         D+L ++F +WLK+NKE +SA+D+R +KLK+ TIECA++RL
Sbjct: 170 NEEITKGKNDQEADHQGGRSDDLAMVFLDWLKSNKETVSADDLRRVKLKKTTIECAARRL 229

Query: 200 GSTKEGRKQLLKLILEWVEQYQLQKKRSRXXXXXXXXXXXAVSQIPRQYDEEQPFPDPNP 21
           G  KEG KQLLKLIL+WV+   LQ++R R             +Q P Q       P+PN 
Sbjct: 230 GGGKEGMKQLLKLILQWVQTNHLQRRRMR-ESSSNVNLLYPYNQDPLQNQN----PNPNS 284

Query: 20  NL 15
           NL
Sbjct: 285 NL 286


>emb|CAA05922.1| ABI3 [Populus trichocarpa]
          Length = 734

 Score =  140 bits (352), Expect = 2e-31
 Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 12/182 (6%)
 Frame = -1

Query: 524 DCMDVMEDFGYMDLIDGNDIWDPSSIFHQNLDDQGEAGDYSNQKEQVSD-FMLQ-----G 363
           +CMDVMEDFGY+DL++ ND +DPSSIFH    D+G   ++  ++ +  D   LQ     G
Sbjct: 176 ECMDVMEDFGYIDLLESNDFFDPSSIFHP---DEGLFEEFQMEQNEPQDQLQLQYDEQAG 232

Query: 362 NSELVQEKEERLG------LDELGVMFFEWLKTNKEHISAEDMRNIKLKRATIECASKRL 201
           N E+ + K ++         D+L ++F +WLK+NKE +SA+D+R +KLK+ TIECA++RL
Sbjct: 233 NEEITKGKNDQEADHQGGRSDDLAMVFLDWLKSNKETVSADDLRRVKLKKTTIECAARRL 292

Query: 200 GSTKEGRKQLLKLILEWVEQYQLQKKRSRXXXXXXXXXXXAVSQIPRQYDEEQPFPDPNP 21
           G  KEG KQLLKLIL+WV+   LQ++R R             +Q P Q       P+PN 
Sbjct: 293 GGGKEGMKQLLKLILQWVQTNHLQRRRMR-ESSSNVNLLYPYNQDPLQNQN----PNPNS 347

Query: 20  NL 15
           NL
Sbjct: 348 NL 349


Top