BLASTX nr result

ID: Panax21_contig00000946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000946
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinif...   111   2e-22
emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]   111   2e-22
gb|AAM64523.1| unknown [Arabidopsis thaliana]                         102   7e-20
ref|NP_565695.1| LOB domain-containing protein 12 [Arabidopsis t...   102   7e-20
ref|XP_002879253.1| hypothetical protein ARALYDRAFT_481923 [Arab...   102   7e-20

>ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinifera]
           gi|296086725|emb|CBI32360.3| unnamed protein product
           [Vitis vinifera]
          Length = 507

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/80 (71%), Positives = 61/80 (76%)
 Frame = -1

Query: 771 RPSGKKPMNKTAGMHSKDDDLDLAEFXXXXXXXXXXXXXXXSRPEAMPLDFVVRPQSKID 592
           RPS KKPMNK AGM S+DDDLDLA+                SRPEAMPLDF+VRPQSKID
Sbjct: 397 RPSAKKPMNKAAGMESRDDDLDLADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKID 456

Query: 591 PDEIRARAKQVVQDQRRLKI 532
           PDEIRARAKQVVQDQRRLK+
Sbjct: 457 PDEIRARAKQVVQDQRRLKM 476


>emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]
          Length = 508

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/80 (71%), Positives = 61/80 (76%)
 Frame = -1

Query: 771 RPSGKKPMNKTAGMHSKDDDLDLAEFXXXXXXXXXXXXXXXSRPEAMPLDFVVRPQSKID 592
           RPS KKPMNK AGM S+DDDLDLA+                SRPEAMPLDF+VRPQSKID
Sbjct: 398 RPSAKKPMNKAAGMESRDDDLDLADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKID 457

Query: 591 PDEIRARAKQVVQDQRRLKI 532
           PDEIRARAKQVVQDQRRLK+
Sbjct: 458 PDEIRARAKQVVQDQRRLKM 477


>gb|AAM64523.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score =  102 bits (255), Expect = 7e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 167 QELPVHQRGDAVSSLFFEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 3
           QELPVHQR DAV+SL FEANAR+RDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI
Sbjct: 54  QELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108


>ref|NP_565695.1| LOB domain-containing protein 12 [Arabidopsis thaliana]
           gi|29427828|sp|Q8LBW3.2|LBD12_ARATH RecName: Full=LOB
           domain-containing protein 12; AltName: Full=ASYMMETRIC
           LEAVES 2-like protein 5; Short=AS2-like protein 5
           gi|3150407|gb|AAC16959.1| expressed protein [Arabidopsis
           thaliana] gi|45330813|dbj|BAD12425.1| ASYMMETRIC
           LEAVES2-like gene 5 protein [Arabidopsis thaliana]
           gi|219807086|dbj|BAH10549.1| ASYMMETRIC LEAVES2-like 5
           protein [Arabidopsis thaliana]
           gi|330253255|gb|AEC08349.1| LOB domain-containing
           protein 12 [Arabidopsis thaliana]
          Length = 193

 Score =  102 bits (255), Expect = 7e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 167 QELPVHQRGDAVSSLFFEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 3
           QELPVHQR DAV+SL FEANAR+RDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI
Sbjct: 54  QELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108


>ref|XP_002879253.1| hypothetical protein ARALYDRAFT_481923 [Arabidopsis lyrata subsp.
           lyrata] gi|297325092|gb|EFH55512.1| hypothetical protein
           ARALYDRAFT_481923 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score =  102 bits (255), Expect = 7e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 167 QELPVHQRGDAVSSLFFEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 3
           QELPVHQR DAV+SL FEANAR+RDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI
Sbjct: 54  QELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108


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