BLASTX nr result

ID: Panax21_contig00000918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000918
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Viti...   509   e-142
ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
emb|CBI29498.3| unnamed protein product [Vitis vinifera]              502   e-140
gb|AAB32591.2| MybSt1 [Solanum tuberosum]                             482   e-134

>ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|222833981|gb|EEE72458.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  509 bits (1310), Expect = e-142
 Identities = 261/339 (76%), Positives = 290/339 (85%), Gaps = 8/339 (2%)
 Frame = -2

Query: 1138 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHYTGSNN-----ATP 974
            MTRRCSHCSHNGHNSRTCPNR VKLFGVRLTDG IRKSASMGNL+ YTGS+N     A+ 
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRVVKLFGVRLTDGSIRKSASMGNLSLYTGSSNMGGPHASG 60

Query: 973  LNGNDSPGDTPDHGGGAA-DGYASEDFVTGSSSSRERKKGVPWTEEEHRMFLIGLQKLGK 797
             N   SP DTPDHG  AA DGYASEDFV GSSSSRERKKGVPWTEEEHRMFL+GLQKLGK
Sbjct: 61   SNNPGSPSDTPDHGAAAAADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGK 120

Query: 796  GDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADEESVETPMVSRD 617
            GDWRGIARNYVISR+PTQVASHAQKYFIRQSN+SRRKRRSSLFDIVADE+ ++TPMVS+D
Sbjct: 121  GDWRGIARNYVISRSPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEQ-LDTPMVSQD 179

Query: 616  FFSVNPPQAETQIDS-LP-PPALEEECESMESANSNDGDPAPPKPENSQFCYPVVYPAYL 443
            F S N P+ +TQ D+ LP PP L+EECESM+S NSN+G+P PPKP++SQ  YPVVYPAYL
Sbjct: 180  FLSTNHPRVDTQTDNPLPAPPPLDEECESMDSTNSNEGEPLPPKPDSSQPAYPVVYPAYL 239

Query: 442  SPIVPFSFPFWSGCSSEQAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGP 263
            SP  P SFPFWSGCS+E +KTE+HEVLKPTAVHSKSPINVD+LVGMSKLS+GESIG+ G 
Sbjct: 240  SPFFPCSFPFWSGCSAEPSKTETHEVLKPTAVHSKSPINVDELVGMSKLSIGESIGDDGS 299

Query: 262  SSLSVQLLDGSSRQSAFHANPAXXXXXXXXXXSPPIHAL 146
            SSLS++LL+G SRQSAFHANPA          S PIHA+
Sbjct: 300  SSLSLKLLEGPSRQSAFHANPA-SNSSGINRSSSPIHAV 337


>ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Vitis vinifera]
          Length = 335

 Score =  509 bits (1310), Expect = e-142
 Identities = 260/338 (76%), Positives = 286/338 (84%), Gaps = 7/338 (2%)
 Frame = -2

Query: 1138 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHYTGSNNATPLNG-- 965
            MTRRCSHCSHNGHNSRTCPNRGVK+FGVRLTDGLIRKSASMGNL+HY GS +    NG  
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGLIRKSASMGNLSHYAGSTSGHHQNGVS 60

Query: 964  ---NDSPGDTPDHGGGAADGYASEDFVTGSSSSRERKKGVPWTEEEHRMFLIGLQKLGKG 794
               + SPG+TP+HG  AADGYASE FV GSSSSRERKKG PWTEEEHRMFL+GLQKLGKG
Sbjct: 61   GNNSVSPGETPEHGA-AADGYASEGFVPGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKG 119

Query: 793  DWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADEESVETPMVSRDF 614
            DWRGI+RNYVISRTPTQVASHAQKYFIRQ+N+SRRKRRSSLFDIVADE SV+TPMVSRDF
Sbjct: 120  DWRGISRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADE-SVDTPMVSRDF 178

Query: 613  FSVNPPQAETQIDS-LP-PPALEEECESMESANSNDGDPAPPKPENSQFCYPVVYPAYLS 440
            FS NP QAET  ++ LP PPAL+EECESM+S NSNDG+P  PKP+  Q C PV+YP Y S
Sbjct: 179  FSTNPSQAETLSNNPLPVPPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFS 238

Query: 439  PIVPFSFPFWSGCSSEQAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPS 260
            P  PFSFPFW G SSE  K E+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG+AGPS
Sbjct: 239  PFFPFSFPFWPGNSSEPTKMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPS 298

Query: 259  SLSVQLLDGSSRQSAFHANPAXXXXXXXXXXSPPIHAL 146
            SL+++LL+GSSRQSAFHANPA            PIHA+
Sbjct: 299  SLTLKLLEGSSRQSAFHANPA-SGSSSMNSSGSPIHAV 335


>ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|222841723|gb|EEE79270.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  503 bits (1294), Expect = e-140
 Identities = 260/338 (76%), Positives = 282/338 (83%), Gaps = 7/338 (2%)
 Frame = -2

Query: 1138 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHYTGSNNAT-PL--- 971
            MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDG IRKSASMGNL+HYTGS+N   PL   
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYTGSSNVGGPLTSG 60

Query: 970  -NGNDSPGDTPDHG-GGAADGYASEDFVTGSSSSRERKKGVPWTEEEHRMFLIGLQKLGK 797
             N   SPGDTPDHG   AA GYASEDFV GSSSSRERKKGVPWTEEEHRMFL+GLQKLGK
Sbjct: 61   PNNPGSPGDTPDHGIAAAAAGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGK 120

Query: 796  GDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADEESVETPMVSRD 617
            GDWRGIARNYVISRTPTQVASHAQKYFIRQSN+SRRKRRSSLFDIVADE   +TPM S+D
Sbjct: 121  GDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEPG-DTPMESQD 179

Query: 616  FFSVNPPQAETQIDS-LPPPALEEECESMESANSNDGDPAPPKPENSQFCYPVVYPAYLS 440
            F S    ++E Q ++ +P P L+EECESM+S NSNDG+P PPKP+ SQ  YPVVYP+Y S
Sbjct: 180  FLSTIEQESEAQSENPVPVPPLDEECESMDSTNSNDGEPPPPKPDCSQSAYPVVYPSYFS 239

Query: 439  PIVPFSFPFWSGCSSEQAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPS 260
            P  PFSFPFWSG S+E  KTE+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG  GPS
Sbjct: 240  PFFPFSFPFWSGHSAEPTKTETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGQDGPS 299

Query: 259  SLSVQLLDGSSRQSAFHANPAXXXXXXXXXXSPPIHAL 146
            SLS +LL+GS RQSAFHANPA          S PIHA+
Sbjct: 300  SLSQKLLEGSPRQSAFHANPA-SNSSSMNRSSSPIHAV 336


>emb|CBI29498.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  502 bits (1292), Expect = e-140
 Identities = 257/333 (77%), Positives = 281/333 (84%), Gaps = 2/333 (0%)
 Frame = -2

Query: 1138 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHYTGSNNATPLNGND 959
            MTRRCSHCSHNGHNSRTCPNRGVK+FGVRLTDGLIRKSASMGNL+HY GS +    NG  
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGLIRKSASMGNLSHYAGSTSGHHQNG-- 58

Query: 958  SPGDTPDHGGGAADGYASEDFVTGSSSSRERKKGVPWTEEEHRMFLIGLQKLGKGDWRGI 779
                TP+HG  AADGYASE FV GSSSSRERKKG PWTEEEHRMFL+GLQKLGKGDWRGI
Sbjct: 59   ----TPEHGA-AADGYASEGFVPGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGI 113

Query: 778  ARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADEESVETPMVSRDFFSVNP 599
            +RNYVISRTPTQVASHAQKYFIRQ+N+SRRKRRSSLFDIVADE SV+TPMVSRDFFS NP
Sbjct: 114  SRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADE-SVDTPMVSRDFFSTNP 172

Query: 598  PQAETQIDS-LP-PPALEEECESMESANSNDGDPAPPKPENSQFCYPVVYPAYLSPIVPF 425
             QAET  ++ LP PPAL+EECESM+S NSNDG+P  PKP+  Q C PV+YP Y SP  PF
Sbjct: 173  SQAETLSNNPLPVPPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSPFFPF 232

Query: 424  SFPFWSGCSSEQAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQ 245
            SFPFW G SSE  K E+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG+AGPSSL+++
Sbjct: 233  SFPFWPGNSSEPTKMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSSLTLK 292

Query: 244  LLDGSSRQSAFHANPAXXXXXXXXXXSPPIHAL 146
            LL+GSSRQSAFHANPA            PIHA+
Sbjct: 293  LLEGSSRQSAFHANPA-SGSSSMNSSGSPIHAV 324


>gb|AAB32591.2| MybSt1 [Solanum tuberosum]
          Length = 342

 Score =  482 bits (1241), Expect = e-134
 Identities = 254/344 (73%), Positives = 287/344 (83%), Gaps = 13/344 (3%)
 Frame = -2

Query: 1138 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHYTGSNN--ATPLNG 965
            MTRRCSHCS NGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTH+   +   +TPLNG
Sbjct: 1    MTRRCSHCSTNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHFASGSGGGSTPLNG 60

Query: 964  --NDSPGDTPDH---GGGAADGYASEDFVTGSSSSRERKKGVPWTEEEHRMFLIGLQKLG 800
              +DSPGDTPDH   GGG+ADGYASEDFV GSSSSRERKKGVPWTEEEHRMFL+GLQKLG
Sbjct: 61   VVHDSPGDTPDHPAVGGGSADGYASEDFVAGSSSSRERKKGVPWTEEEHRMFLLGLQKLG 120

Query: 799  KGDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADEESVETPMVSR 620
            KGDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVAD ES +TPMVSR
Sbjct: 121  KGDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVAD-ESGDTPMVSR 179

Query: 619  DFFSVNPPQAETQIDSL--PPPALEEECESM---ESANSNDGDPAPPKPENSQFCYPVVY 455
            DF + +P QAE Q ++L  P PA++EECESM    SANS DG+ A P PE+SQ+ +P+VY
Sbjct: 180  DFLADDPAQAEMQSNNLLPPTPAVDEECESMGSAASANSIDGEHALPIPESSQYQHPLVY 239

Query: 454  PAYLSPIVPFSFPFWSGCSSEQAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIG 275
            PAY++P  P  +P W G ++E A  E+HEVLKP AVHSKSPINVD+LVGMSKLSLGESIG
Sbjct: 240  PAYVAPFYPMPYPCWPGYTAEPAIAETHEVLKPIAVHSKSPINVDELVGMSKLSLGESIG 299

Query: 274  NAG-PSSLSVQLLDGSSRQSAFHANPAXXXXXXXXXXSPPIHAL 146
            +A  P SLS++L++GSSRQSAFHANP+          + PIHA+
Sbjct: 300  DAAKPPSLSLKLVEGSSRQSAFHANPSSGSSGMNSSHN-PIHAV 342


Top