BLASTX nr result

ID: Panax21_contig00000912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000912
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272885.1| PREDICTED: uncharacterized protein LOC100257...    86   2e-15
emb|CAN75055.1| hypothetical protein VITISV_039451 [Vitis vinifera]    86   2e-15
ref|XP_002522717.1| Protein phosphatase 1 regulatory subunit, pu...    84   1e-14
ref|XP_002325679.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002326103.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|XP_002272885.1| PREDICTED: uncharacterized protein LOC100257895 [Vitis vinifera]
           gi|296081251|emb|CBI17995.3| unnamed protein product
           [Vitis vinifera]
          Length = 672

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = -2

Query: 372 RLGISANQNDRGLRSELKNMRKGNHGVAAHKRXXXXXXXXXXSQQAAASPKPSRDRHGRL 193
           RLG+SA+Q DRGLRSE K++RKG+HGVA++K            ++AA SPK S++RH RL
Sbjct: 572 RLGMSAHQFDRGLRSEHKSVRKGSHGVASNK----PSSSATHGRKAAVSPKRSKNRHVRL 627

Query: 192 -PPPSGIKTTV--RPSFDDVGSKLLSFRPGLGVHRCRSEGTPGGL 67
            PPP+G K T   RP   D  +  L F+P   + R RSEGT G L
Sbjct: 628 PPPPTGTKATAHHRPHHLDFANHFLGFKPDSFMRRSRSEGTLGAL 672


>emb|CAN75055.1| hypothetical protein VITISV_039451 [Vitis vinifera]
          Length = 730

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = -2

Query: 372 RLGISANQNDRGLRSELKNMRKGNHGVAAHKRXXXXXXXXXXSQQAAASPKPSRDRHGRL 193
           RLG+SA+Q DRGLRSE K++RKG+HGVA++K            ++AA SPK S++RH RL
Sbjct: 630 RLGMSAHQFDRGLRSEHKSVRKGSHGVASNK----PSSSATHGRKAAVSPKRSKNRHVRL 685

Query: 192 -PPPSGIKTTV--RPSFDDVGSKLLSFRPGLGVHRCRSEGTPGGL 67
            PPP+G K T   RP   D  +  L F+P   + R RSEGT G L
Sbjct: 686 PPPPTGTKATAHHRPHHLDFANHFLGFKPDSFMRRSRSEGTLGAL 730


>ref|XP_002522717.1| Protein phosphatase 1 regulatory subunit, putative [Ricinus
           communis] gi|223538067|gb|EEF39679.1| Protein
           phosphatase 1 regulatory subunit, putative [Ricinus
           communis]
          Length = 673

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = -2

Query: 372 RLGISANQNDRGLRSELKNMRKGNHGVAAHKRXXXXXXXXXXSQQAAASPKPSRDRHGRL 193
           RLGI+A+Q DRG+RS+ K  RKG+HG+   +             QA  SPKPSR RH RL
Sbjct: 573 RLGINAHQFDRGIRSDNKAARKGSHGLGGTR--PTSSSTHGRKSQALVSPKPSRGRHARL 630

Query: 192 PPPSGIK--TTVRPSFDDVGSKLLSFRPGLGVHRCRSEGTPGGL 67
            PP+G K  T  R  + D+GSKLL+ R  L + R RSEGT G L
Sbjct: 631 -PPTGTKAITGHRHHYFDIGSKLLNLRSELSIRRSRSEGTLGAL 673


>ref|XP_002325679.1| predicted protein [Populus trichocarpa] gi|222862554|gb|EEF00061.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -2

Query: 372 RLGISANQNDRGLRSELKNMRKGNHGVAAHKRXXXXXXXXXXSQQAAASPKPSRDRHGRL 193
           RLGIS++Q DRGLRS+ K +RK +HG+   +             Q   S K S  RH R 
Sbjct: 581 RLGISSHQFDRGLRSDNKAVRKASHGLGGAR--PLPSSTHARKSQPVISTKRSSGRHLR- 637

Query: 192 PPPSGIKTTVRPSFDDVGSKLLSFR-PGLGVHRCRSEGTPG 73
             PSG + T      D+GSKLL+FR     VHR RSEGT G
Sbjct: 638 SQPSGTQATTSLRHHDLGSKLLNFRSESSSVHRSRSEGTLG 678


>ref|XP_002326103.1| predicted protein [Populus trichocarpa] gi|222862978|gb|EEF00485.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = -2

Query: 372 RLGISANQNDRGLRSELKNMRKGNHGVAAHKRXXXXXXXXXXSQQAAASPKPSRDRHGRL 193
           RLGIS++Q DRGLRSE K  RK +H +A  +              A  SPK SR RH RL
Sbjct: 350 RLGISSHQFDRGLRSENKAARKASHSLAGAR--PSSSSTHARKSHAVTSPKRSRGRHLRL 407

Query: 192 PPPSGIKTTVRPSFDDVGSKLLSFRPGL--GVHRCRSEGTPG 73
            PP+G KTT    +    + L  F  GL    HR RSEGT G
Sbjct: 408 -PPNGAKTTSSHRYHHNHADLDKFNYGLEFSFHRSRSEGTLG 448


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