BLASTX nr result

ID: Panax21_contig00000898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000898
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]               420   e-115
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   420   e-115
ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   419   e-115
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              419   e-115
emb|CAK22424.1| matrix attachment region binding protein [Beta v...   410   e-112

>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score =  420 bits (1079), Expect = e-115
 Identities = 213/231 (92%), Positives = 222/231 (96%)
 Frame = -1

Query: 694 KVEDLSKEFLTSDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLRAHCDGE 515
           KVEDL KEF T+DSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFL+AHCDGE
Sbjct: 24  KVEDLWKEFSTTDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLKAHCDGE 83

Query: 514 TLAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHS 335
           TL VADSKLGNAIKEKLQI+CVHNN VMELMRGVRSQLTELI+GLG+QDLAPMSLGLSHS
Sbjct: 84  TLGVADSKLGNAIKEKLQIDCVHNNAVMELMRGVRSQLTELITGLGSQDLAPMSLGLSHS 143

Query: 334 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKVVQDNILYA 155
           LSRYKLKFSPDKVDTMI+QAI LLDDLDKELNTYAMRVREWYGWHFPELAK+VQDNILYA
Sbjct: 144 LSRYKLKFSPDKVDTMIVQAISLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYA 203

Query: 154 KSVKLMGDRTNAAKLDFSEILPEEIETELKEASSISMGTEVSDLDLINIKD 2
           K+VKLMGDR NAAKLDFSEILPEE+E ELKEAS ISMGTEVSDLDL NIKD
Sbjct: 204 KAVKLMGDRVNAAKLDFSEILPEEVEAELKEASMISMGTEVSDLDLENIKD 254


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  420 bits (1079), Expect = e-115
 Identities = 213/231 (92%), Positives = 224/231 (96%)
 Frame = -1

Query: 694 KVEDLSKEFLTSDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLRAHCDGE 515
           KVEDL KEF TS+SAR+VVKLKAFSKFENT+EALSAATLLIDSKPSKGLRKFLR HCDGE
Sbjct: 24  KVEDLWKEFSTSESARQVVKLKAFSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGE 83

Query: 514 TLAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHS 335
           TLAVADSKLGNAIKEKLQIECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHS
Sbjct: 84  TLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHS 143

Query: 334 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKVVQDNILYA 155
           LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAK+VQDNILY+
Sbjct: 144 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYS 203

Query: 154 KSVKLMGDRTNAAKLDFSEILPEEIETELKEASSISMGTEVSDLDLINIKD 2
           K+VKLMG+RTNAAKLDFSEILPEE+ETELKEA+ ISMGTEVSDLDL+NIK+
Sbjct: 204 KAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKE 254


>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  419 bits (1078), Expect = e-115
 Identities = 213/231 (92%), Positives = 224/231 (96%)
 Frame = -1

Query: 694 KVEDLSKEFLTSDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLRAHCDGE 515
           KVEDL KEF +S+SAR+VVKLKAFSKFENT+EALSAATLLIDSKPSKGLRKFLR HCDGE
Sbjct: 24  KVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGE 83

Query: 514 TLAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHS 335
           TLAVADSKLGNAIKEKLQIECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHS
Sbjct: 84  TLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHS 143

Query: 334 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKVVQDNILYA 155
           LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAK+VQDNILYA
Sbjct: 144 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYA 203

Query: 154 KSVKLMGDRTNAAKLDFSEILPEEIETELKEASSISMGTEVSDLDLINIKD 2
           K+VKLMG+RTNAAKLDFSEILPEE+ETELKEA+ ISMGTEVSDLDL+NIK+
Sbjct: 204 KAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKE 254


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  419 bits (1078), Expect = e-115
 Identities = 213/231 (92%), Positives = 224/231 (96%)
 Frame = -1

Query: 694 KVEDLSKEFLTSDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLRAHCDGE 515
           KVEDL KEF +S+SAR+VVKLKAFSKFENT+EALSAATLLIDSKPSKGLRKFLR HCDGE
Sbjct: 24  KVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGE 83

Query: 514 TLAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHS 335
           TLAVADSKLGNAIKEKLQIECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHS
Sbjct: 84  TLAVADSKLGNAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHS 143

Query: 334 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKVVQDNILYA 155
           LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAK+VQDNILYA
Sbjct: 144 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYA 203

Query: 154 KSVKLMGDRTNAAKLDFSEILPEEIETELKEASSISMGTEVSDLDLINIKD 2
           K+VKLMG+RTNAAKLDFSEILPEE+ETELKEA+ ISMGTEVSDLDL+NIK+
Sbjct: 204 KAVKLMGNRTNAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKE 254


>emb|CAK22424.1| matrix attachment region binding protein [Beta vulgaris]
          Length = 572

 Score =  410 bits (1054), Expect = e-112
 Identities = 206/231 (89%), Positives = 223/231 (96%)
 Frame = -1

Query: 694 KVEDLSKEFLTSDSARKVVKLKAFSKFENTSEALSAATLLIDSKPSKGLRKFLRAHCDGE 515
           ++EDL KEF + DSARKVVKLKAF KFENT+EALSAATLLIDSKPSKGLRKFL+AHC GE
Sbjct: 24  QIEDLWKEFTSVDSARKVVKLKAFDKFENTAEALSAATLLIDSKPSKGLRKFLKAHCKGE 83

Query: 514 TLAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHS 335
           TLAVADSKLGNAIKEKLQIECVHNN+VMELMRGVRSQL+ELISGLGAQDLAPMSLGLSHS
Sbjct: 84  TLAVADSKLGNAIKEKLQIECVHNNSVMELMRGVRSQLSELISGLGAQDLAPMSLGLSHS 143

Query: 334 LSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKVVQDNILYA 155
           LSRYKLKFSP+KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPEL+K+VQDNILYA
Sbjct: 144 LSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELSKIVQDNILYA 203

Query: 154 KSVKLMGDRTNAAKLDFSEILPEEIETELKEASSISMGTEVSDLDLINIKD 2
           K+VKLMG+R NAAKLDFSE+LPEE+ET LKEA+ ISMGTEVSDLDL+NIK+
Sbjct: 204 KAVKLMGNRVNAAKLDFSEVLPEEVETGLKEAAMISMGTEVSDLDLLNIKE 254


Top